Immunome project consortium for AutoInflammatory Disorders

Livrables

Completion of a first version of the plan for the management of data to be collected, generated and processed by the project

Publications

Structural basis of human IL-18 sequestration by the decoy receptor IL-18 binding protein (IL-18BP) in inflammation and tumor immunity

Auteurs: Detry S., Andries J., Bloch Y., Gabay C., Clancy D.M., Savvides S.N.
Publié dans: Journal of Biological Chemistry (2022);101908., 2022, ISSN 0021-9258
Éditeur: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1016/j.jbc.2022.101908

A computational workflow for the detection of candidate diagnostic biomarkers of Kawasaki disease using time-series gene expression data

Auteurs: Vasileios C. Pezoulas; Costas Papaloukas; Maëva Veyssiere; Andreas V. Goules; Athanasios G. Tzioufas; Vassili Soumelis; Dimitrios I. Fotiadis
Publié dans: Computational and Structural Biotechnology Journal, Vol 19, Iss , Pp 3058-3068 (2021), Numéro 1, 2021, ISSN 2001-0370
Éditeur: Elsevier
DOI: 10.1016/j.csbj.2021.05.036

Fast and furious: The neutrophil and its armamentarium in health and disease

Auteurs: Mieke Metzemaekers; Bert Malengier‐Devlies; Mieke Gouwy; Lien De Somer; Fernando de Queiroz Cunha; Ghislain Opdenakker; Paul Proost
Publié dans: MEDICINAL RESEARCH REVIEWS, Numéro 12, 2023, ISSN 1098-1128
Éditeur: Wiley
DOI: 10.1002/med.21958

Neurodegenerative Disease and the NLRP3 Inflammasome

Auteurs: Jonathan A. Holbrook, Heledd H. Jarosz-Griffiths, Emily Caseley, Samuel Lara-Reyna, James A. Poulter, Caroline H. Williams-Gray, Daniel Peckham, Michael F. McDermott
Publié dans: Frontiers in Pharmacology, Numéro 12, 2021, ISSN 1663-9812
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fphar.2021.643254

Novel somatic mutations in UBA1 as a cause of VEXAS syndrome

Auteurs: James A Poulter, Jason Charles Collins, Catherine Cargo, Ruth M de Tute, Paul Evans, Daniela Ospina Cardona, David T Bowen, Joanna R Cunnington, Elaine Baguley, Mark Quinn, Michael Green, Dennis McGonagle, David B Beck, Achim Werner, Sinisa Savic
Publié dans: Blood, 2021, ISSN 0006-4971
Éditeur: American Society of Hematology
DOI: 10.1182/blood.2020010286

From ELISA to Immunosorbent Tandem Mass Spectrometry Proteoform Analysis: The Example of CXCL8/Interleukin-8

Auteurs: Mieke Metzemaekers, Sara Abouelasrar Salama, Jennifer Vandooren, Anneleen Mortier, Rik Janssens, Sofie Vandendriessche, Eva Ganseman, Erik Martens, Mieke Gouwy, Barbara Neerinckx, Patrick Verschueren, Lien De Somer, Carine Wouters, Sofie Struyf, Ghislain Opdenakker, Jo Van Damme, Paul Proost
Publié dans: Frontiers in Immunology, Numéro 12, 2021, ISSN 1664-3224
Éditeur: Frontiers in
DOI: 10.3389/fimmu.2021.644725

Moving towards a systems-based classification of innate immune-mediated diseases

Auteurs: Sinisa Savic, Emily A. Caseley, Michael F. McDermott
Publié dans: Nature Reviews Rheumatology, Numéro 16/4, 2020, Page(s) 222-237, ISSN 1759-4790
Éditeur: Nature Publishing Group
DOI: 10.1038/s41584-020-0377-5

A critical region of A20 unveiled by missense TNFAIP3 variations that lead to autoinflammation

Auteurs: Elma El Khouri; Farah Diab; Camille Louvrier; Eman Assrawi; Aphrodite Daskalopoulou; Alexandre Nguyen; William Piterboth; Samuel Deshayes; Alexandra Desdoits; Bruno Copin; Florence Dastot Le Moal; Sonia Athina Karabina; Serge Amselem; Achille Aouba; Irina Giurgea
Publié dans: eLife, Vol 12 (2023), Numéro 12, 2023, ISSN 2050-084X
Éditeur: eLife Sciences Publications
DOI: 10.7554/elife.81280

Mutations in the B30.2 and the central helical scaffold domains of pyrin differentially affect inflammasome activation

Auteurs: Daria chirita; Flora Magnotti; Pauiine Bronnec; Sarah Dalmon; Amandine Martin; michel Popoff; Mathieu Gerfaud-Valentin; Pascal Seve; Alexandre Belot; Anne Contis; Agnes Duquesne; gaetane nocturne; Irene lemelle; Sophie Georgin-Lavialle; Guilaine Boursier; Isabelle Touitou; Yvan Jamilloux; Thomas Henry
Publié dans: Cell Death and Disease, Vol 14, Iss 3, Pp 1-13 (2023), Numéro 16, 2023, ISSN 2041-4889
Éditeur: Nature Publishing Group
DOI: 10.1038/s41419-023-05745-9

Phenotypical and Functional Characterization of Neutrophils in Two Pyrin-Associated Auto-inflammatory Diseases

Auteurs: Bert Malengier-Devlies, Mieke Metzemaekers, Mieke Gouwy, Erika Van Nieuwenhove, Albrecht Betrains, Maaike Cockx, Lotte Vanbrabant, Noëmie Pörtner, Jurgen Vercauteren, Lien De Somer, Sofie Struyf, Steven Vanderschueren, Ellen De Langhe, Paul Proost, Patrick Matthys, Carine Wouters
Publié dans: Journal of Clinical Immunology, 2021, ISSN 0271-9142
Éditeur: Kluwer Academic/Plenum Publishers
DOI: 10.1007/s10875-021-01008-4

Increased IL‐10‐producing regulatory T cells are characteristic of severe cases of COVID‐19

Auteurs: Julika Neumann, Teresa Prezzemolo, Lore Vanderbeke, Carlos P Roca, Margaux Gerbaux, Silke Janssens, Mathijs Willemsen, Oliver Burton, Pierre Van Mol, Yannick Van Herck, Joost Wauters, Els Wauters, Adrian Liston, Stephanie Humblet‐Baron, Francesca Bosisio, Frederik De Smet, Christophe Dooms, Abhishek Garg, Jan Gunst, Greet Hermans, Diether Lambrechts, Natalie Lorent, Kim Martinod, Patrick Matthys
Publié dans: Clinical & Translational Immunology, Numéro 9/11, 2020, ISSN 2050-0068
Éditeur: John Wiley & Sons Australia, Ltd
DOI: 10.1002/cti2.1204

Fast diagnostic test for familial Mediterranean fever based on a kinase inhibitor

Auteurs: Flora Magnotti, Tiphaine Malsot, Sophie Georgin-lavialle, Fatima Abbas, Amandine Martin, Alexandre Belot, Maxime Fauter, Muriel Rabilloud, Mathieu Gerfaud-Valentin, Pascal Sève, Agnes Duquesne, Arnaud Hot, Stephane Durupt, Léa Savey, Irina Giurgea, Gilles Grateau, Thomas Henry, Yvan Jamilloux
Publié dans: Annals of the Rheumatic Diseases, Numéro 80/1, 2020, Page(s) 128-132, ISSN 0003-4967
Éditeur: BMJ Publishing Group
DOI: 10.1136/annrheumdis-2020-218366

Steroid hormone catabolites activate the pyrin inflammasome through a non-canonical mechanism.

Auteurs: Flora Magnotti, Daria Chirita, Sarah Dalmon, Amandine Martin, Pauline Bronnec, Jeremy Sousa, Olivier Helynck, Wonyong Lee, Daniel L. Kastner, Jae Jin Chae, Michael F. McDermott, Alexandre Belot, Michel Popoff, Pascal Sève, Sophie Georgin-Lavialle, Hélène Munier-Lehmann, Tu Anh Tran, Ellen De Langhe, Carine Wouters, Yvan Jamilloux, Thomas Henry
Publié dans: Cell Reports, 2022, Oct 11, 41, 2022, ISSN 2211-1247
Éditeur: Cell Press
DOI: 10.1016/j.celrep.2022.111472

An Atypical Autoinflammatory Disease Due to an LRR Domain NLRP3 Mutation Enhancing Binding to NEK7.

Auteurs: Emily A. Caseley; Samuel Lara-Reyna; James A. Poulter; Joanne Topping; Clive Carter; Fatima Nadat; Gavin P. Spickett; Sinisa Savic; Sinisa Savic; Michael F. McDermott
Publié dans: Journal of Clinical Immunology, Numéro 7, 2022, ISSN 1573-2592
Éditeur: Springer New York
DOI: 10.1007/s10875-021-01161-w

Discrimination of COVID‐19 from inflammation‐induced cytokine storm syndromes by disease‐related blood biomarkers

Auteurs: Christoph Kessel, Richard Vollenberg, Katja Masjosthusmann, Claas Hinze, Helmut Wittkowski, France Debaugnies, Carole Nagant, Francis Corazza, Frédéric Vély, Gilles Kaplanski, Charlotte Girard‐Guyonvarc’h, Cem Gabay, Hartmut Schmidt, Dirk Foell, Phil‐Robin Tepasse
Publié dans: Arthritis & Rheumatology, 2021, ISSN 2326-5191
Éditeur: John Wiley & Sons
DOI: 10.1002/art.41763

Novel method to quantify peptidylarginine deiminase activity shows distinct citrullination patterns in rheumatoid and juvenile idiopathic arthritis

Auteurs: Karen Yu; Luna Dillemans; Mieke Gouwy; Helena Bessa; Mieke Metzemaekers; Erik Martens; Patrick Matthys; Xavier Bossuyt; Patrick Verschueren; Carine Wouters; Lien De Somer; Paul Proost
Publié dans: Frontiers in Immunology, Vol 14 (2023), Numéro 11, 2023, ISSN 1664-3224
Éditeur: Lausanne Frontiers Media S.A
DOI: 10.3389/fimmu.2023.1111465

A novel RELA truncating mutation in familial Behçet’s Disease‐like mucocutaneous ulcerative condition.

Auteurs: Fahd Adeeb; Emma R. Dorris; Niamh E. Morgan; Niamh E. Morgan; Dylan Lawless; Aqeel Maqsood; Wan Lin Ng; Orla G Killeen; Eoin P. Cummins; Cormac T. Taylor; Sinisa Savic; Anthony G. Wilson; Alexander Fraser; Alexander Fraser
Publié dans: Arthritis & Rheumatology, Numéro 11, 2021, ISSN 2326-5205
Éditeur: John Wiley & Sons, Inc.
DOI: 10.1002/art.41531

An Immunological Axis Involving Interleukin 1β and Leucine-Rich-α2-Glycoprotein Reflects Therapeutic Response of Children with Kawasaki Disease: Implications from the KAWAKINRA Trial

Auteurs: Christoph Kessel; Isabelle Kone-Paut; Stephanie Tellier; Alexandre Belot; Katja Masjosthusmann; Helmut Wittkowski; Sabrina Fuehner; Linda Rossi-Semerano; Perrine Dusser; Isabelle Marie; Nadja Boukhedouni; Helène Agostini; Céline Piedvache; Dirk Foell
Publié dans: Journal of Clinical Immunology, Numéro 42, 2022, Page(s) 1330-1341, ISSN 1573-2592
Éditeur: Springer New York
DOI: 10.1007/s10875-022-01301-w

Neutrophil chemoattractant receptors in health and disease: double-edged swords

Auteurs: Mieke Metzemaekers, Mieke Gouwy, Paul Proost
Publié dans: Cellular & Molecular Immunology, Numéro 17/5, 2020, Page(s) 433-450, ISSN 1672-7681
Éditeur: Nature Publishing Group
DOI: 10.1038/s41423-020-0412-0

A Cross Entropy Test Allows Quantitative Statistical Comparison of t-SNE and UMAP Representations

Auteurs: Roca1, Carlos P.; Burton, Oliver T.; Neumann, Julika; Tareen, Samar; Whyte, Carly E.; Humblet-Baron, Stéphanie; Liston, Adrian
Publié dans: Cell Reports Methods, Numéro 25, 2023, ISSN 2667-2375
Éditeur: Cell Press Elsevier Inc.
DOI: 10.2139/ssrn.4189024

Definition and validation of serum biomarkers for optimal differentiation of hyperferritinemic cytokine storm conditions in children: a multi-centre retrospective cohort study

Auteurs: Christoph Kessel, Ndate Fall, Alexei Grom, Wilco de Jager, Sebastiaan Vastert, Raffaele Strippoli, Claudia Bracaglia, Erik Sundberg, AnnaCarin Horne, Stephan Ehl, Sandra Ammann, Carine Wouters, Kai Lehmberg, Fabrizio De Benedetti, Carolin Park, Claas Hinze, Helmut Wittkowski, Katharina Kessel, Karin Beutel, Dirk Foell, Dirk Holzinger
Publié dans: Lancet Rheumatol, 2021, Page(s) e563-e573, ISSN 2665-9913
Éditeur: Lancet Publishing Group
DOI: 10.1016/s2665-9913(21)00115-6

Defective Sec61α1 underlies a novel cause of autosomal dominant severe congenital neutropenia

Auteurs: Erika Van Nieuwenhove, John S. Barber, Julika Neumann, Elien Smeets, Mathijs Willemsen, Emanuela Pasciuto, Teresa Prezzemolo, Vasiliki Lagou, Laura Seldeslachts, Bert Malengier-Devlies, Mieke Metzemaekers, Sarah Haßdenteufel, Axelle Kerstens, Rob van der Kant, Frederic Rousseau, Joost Schymkowitz, Daniele Di Marino, Sven Lang, Richard Zimmermann, Susan Schlenner, Sebastian Munck, Paul Proost, Pat
Publié dans: Journal of Allergy and Clinical Immunology, Numéro 146/5, 2020, Page(s) 1180-1193, ISSN 0091-6749
Éditeur: Mosby Inc.
DOI: 10.1016/j.jaci.2020.03.034

Stratification of hospitalized COVID-19 patients into clinical severity progression groups by immuno-phenotyping and machine learning

Auteurs: "Mueller, Yvonne M.; Schrama, Thijs J.; Rik, Ruijten; Schreurs, Marco W. J.; Grashof, Dwin G. B.; van de Werken, Harmen J. G.; Jona Lasinio, Giovanna; Daniel, Á lvarez-Sierra; Kiernan, Caoimhe H.; Castro Eiro, Melisa D.; Marjan van Meurs,; Inge, Brouwers-Haspels; Manzhi, Zhao; Ling, Li; Harm de Wit,; Ouzounis, Christos A.; Wilmsen, Merel E. P.; Alofs, Tessa M.; Laport, Danique A.; Tamara van W"
Publié dans: Nature Communications, Numéro 7, 2022, Page(s) 915, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-022-28621-0

Dominant mutations in ITPR3 cause Charcot‐Marie‐Tooth disease

Auteurs: Julius Rönkkö, Svetlana Molchanova, Anya Revah‐Politi, Elaine M. Pereira, Mari Auranen, Jussi Toppila, Jouni Kvist, Anastasia Ludwig, Julika Neumann, Geert Bultynck, Stéphanie Humblet‐Baron, Adrian Liston, Anders Paetau, Claudio Rivera, Matthew B. Harms, Henna Tyynismaa, Emil Ylikallio
Publié dans: Annals of Clinical and Translational Neurology, Numéro 7/10, 2020, Page(s) 1962-1972, ISSN 2328-9503
Éditeur: John Wiley & Sons
DOI: 10.1002/acn3.51190

Phenotypic analysis of pyrin-associated autoinflammation with neutrophilic dermatosis patients during treatment

Auteurs: Erika Van Nieuwenhove, Ellen De Langhe, James Dooley, Joost Van Den Oord, Mohammad Shahrooei, Nima Parvaneh, Vahid Ziaee, Sinisa Savic, Mark Kacar, Xavier Bossuyt, Stephanie Humblet-Baron, Adrian Liston, Carine Wouters
Publié dans: Rheumatology, 2021, ISSN 1462-0324
Éditeur: Oxford University Press
DOI: 10.1093/rheumatology/keab221

Endogenous modification of the chemoattractant CXCL5 alters receptor usage and enhances its activity toward neutrophils and monocytes

Auteurs: Mieke Metzemaekers, Anneleen Mortier, Alessandro Vacchini, Daiane Boff, Karen Yu, Rik Janssens, Floriana M. Farina, Samantha Milanesi, Nele Berghmans, Noëmie Pörtner, Jo Van Damme, Marcello Allegretti, Mauro M. Teixeira, Massimo Locati, Elena M. Borroni, Flavio A. Amaral, Paul Proost
Publié dans: Science Signaling, Numéro 14/673, 2021, Page(s) eaax3053, ISSN 1937-9145
Éditeur: American Association for the Advancement of Science
DOI: 10.1126/scisignal.aax3053

Synovial Fluid Neutrophils From Patients With Juvenile Idiopathic Arthritis Display a Hyperactivated Phenotype

Auteurs: Mieke Metzemaekers, Bert Malengier‐Devlies, Karen Yu, Sofie Vandendriessche, Jonas Yserbyt, Patrick Matthys, Lien De Somer, Carine Wouters, Paul Proost
Publié dans: Arthritis & Rheumatology, Numéro 73/5, 2021, Page(s) 875-884, ISSN 2326-5191
Éditeur: john wiley & sons
DOI: 10.1002/art.41605

Natural killer cells in Multiple Sclerosis: Entering the stage.

Auteurs: Jarne Beliën, An Goris and Patrick Matthys.
Publié dans: Frontiers in Immunology:06 April 2022, volume 13, 2022, ISSN 1664-3224
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fimmu.2022.869447

Pyrin dephosphorylation is sufficient to trigger inflammasome activation in familial Mediterranean fever patients

Auteurs: Flora Magnotti, Lucie Lefeuvre, Sarah Benezech, Tiphaine Malsot, Louis Waeckel, Amandine Martin, Sébastien Kerever, Daria Chirita, Marine Desjonqueres, Agnès Duquesne, Mathieu Gerfaud‐Valentin, Audrey Laurent, Pascal Sève, Michel‐Robert Popoff, Thierry Walzer, Alexandre Belot, Yvan Jamilloux, Thomas Henry
Publié dans: EMBO Molecular Medicine, Numéro 11/11, 2019, ISSN 1757-4676
Éditeur: John Wiley & Sons Ltd.
DOI: 10.15252/emmm.201910547

Synergistic TLR/IFNα/β-Signaling Facilitates Escape of IL-18 Expression from Endotoxin Tolerance

Auteurs: Emely Verweyen, Dirk Holzinger, Toni Weinhage, Claas Hinze, Helmut Wittkowski, Peter Pickkers, Sabrin Albeituni, Katherine Verbist, Kim E Nichols, Grant Schulert, Alexei Grom, Dirk Foell, Christoph Kessel
Publié dans: American Journal of Respiratory and Critical Care Medicine, 2019, ISSN 1073-449X
Éditeur: American Thoracic Society
DOI: 10.1164/rccm.201903-0659oc

Identification of Critical Transcriptomic Signaling Pathways in Patients with H Syndrome and Rosai-Dorfman Disease

Auteurs: Samuel Lara-Reyna, James A. Poulter, Elton J.R. Vasconcelos, Mark Kacar, Michael F. McDermott, Reuben Tooze, Rainer Doffinger, Sinisa Savic
Publié dans: Journal of Clinical Immunology, Numéro 41/2, 2021, Page(s) 441-457, ISSN 0271-9142
Éditeur: Kluwer Academic/Plenum Publishers
DOI: 10.1007/s10875-020-00932-1

De novo gain‐of‐function variations in LYN lead to an early onset systemic autoinflammatory disorder

Auteurs: Louvrier, Camille; El Khouri, Elma; Grall Lerosey, Martine; Quartier, Pierre; Guerrot, Anne‐marie; Bader Meunier, Brigitte; Chican, Julie; Mohammad, Malaïka; Assrawi, Eman; Daskalopoulou, Aphrodite; Arenas Garcia, Angela; Copin, Bruno; Piterboth, William; Dastot Le Moal, Florence; Karabina, Sonia, A; Amselem, Serge; Giurgea, Irina
Publié dans: Arthritis & rheumatology, Numéro 17, 2023, ISSN 2326-5191
Éditeur: Wyley and Sons
DOI: 10.1002/art.42354

Gene–Dose Effect of MEFV Gain-of-Function Mutations Determines ex vivo Neutrophil Activation in Familial Mediterranean Fever

Auteurs: Iris Stoler, Judith Freytag, Banu Orak, Nadine Unterwalder, Stephan Henning, Katrin Heim, Horst von Bernuth, Renate Krüger, Stefan Winkler, Patience Eschenhagen, Eva Seipelt, Marcus A. Mall, Dirk Foell, Christoph Kessel, Helmut Wittkowski, Tilmann Kallinich
Publié dans: Frontiers in Immunology, Numéro 11, 2020, ISSN 1664-3224
Éditeur: Frontiers in
DOI: 10.3389/fimmu.2020.00716

Inflammasome inhibition under physiological and pharmacological conditions

Auteurs: Emily A. Caseley, James A. Poulter, François Rodrigues, Michael F. McDermott
Publié dans: Genes & Immunity, Numéro 21/4, 2020, Page(s) 211-223, ISSN 1466-4879
Éditeur: Nature Publishing Group
DOI: 10.1038/s41435-020-0104-x

Evidence of B Cell Clonality and Investigation Into Properties of the IgM in Patients With Schnitzler Syndrome

Auteurs: Shelly Pathak, Dorota Rowczenio, Samuel Lara-Reyna, Mark Kacar, Roger Owen, Gina Doody, Karoline Krause, Helen Lachmann, Rainer Doffinger, Darren Newton, Sinisa Savic
Publié dans: Frontiers in Immunology, Numéro 11, 2020, ISSN 1664-3224
Éditeur: Frontiers
DOI: 10.3389/fimmu.2020.569006

RNF213-associated urticarial lesions with hypercytokinemia

Auteurs: Louvrier C, Awad F, Cosnes A, El Khouri E, Assrawi E, Daskalopoulou A, Copin B, Bocquet H, Chantot Bastaraud S, Arenas Garcia A, Dastot Le Moal F, De La Grange P, Duquesnoy P, Guerrera CI, Piterboth W, Ortonne N, Chosidow O, Karabina SA, Amselem S, Giurgea I.
Publié dans: J Allergy Clin Immunol2022 Jun 30;S0091-6749(22)00888-0, 2022, ISSN 0091-6749
Éditeur: Mosby Inc.
DOI: 10.1016/j.jaci.2022.06.016

Structural basis of activation and antagonism of receptor signaling mediated by interleukin-27

Auteurs: Katarzyna Skladanowska,Yehudi Bloch,Jamie Strand, Kerry F. White, Jing Hua,Daniel Aldridge, Martin Welin, Derek T. Logan, Arne Soete, Romain Merceron,Casey Murphy, Mathias Provost, J. Fernando Bazan, Christopher A. Hunter,Jonathan A. Hill and Savvas N. Savvides.
Publié dans: Cell Reports 41, 111490 (2022), 2022, ISSN 2211-1247
Éditeur: Cell Press
DOI: 10.1016/j.celrep.2022.111490

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