Genomic and nutritional innovations for genetically superior farmed fish to improve efficiency in European aquaculture

Deliverables

Novel feed formulations targeting zero-waste

Report the utilisation of novel feed ingredients by genetically superior fish fed innovative feed formulations targeting zero waste [Month 52].

Investing in future: Combined effect of nutritional advances and genetic improvement on nutritional requirements, resource efficiency and environment

Report on the combined effect of nutritional advances and genetic improvement on nutritional requirements, resource efficiency and climate change [Month 44].

Novel feed formulations targeting farm competitiveness

Report on tailored feed formulae for genetically superior fish reared under different production systems to maximise growth and feed efficiency at farm level and to increase European farm competitiveness Month 40

Consumer, regulator and company surveys

Report on consumer, regulator and company surveys [Month 34].

Impact on industry and society, environment

Report on the progress realised in breeding and its impact on industry and society, environment [Month 6, 12].

Validation of practical implementation of genomic selection in commercial breeding programmes

Report on the results of GS in practical breeding programmes [Month 45].

Novel feed formulations targeting nutritional value and flesh quality for consumers

Report on innovative feed formulae and feeding strategies, including nutritional programming, for genetically superior fish to improve farmed fish product quality, nutritional value and flesh quality for consumers [Month 52].

Investing in future: Optimisation of breeding programmes

Report on optimisation of breeding programmes [Month 40].

Final report on indicators to monitor and measure progress towards the expected impacts

Final report on the indicators to monitor and measure progress towards the expected impacts [Month 52].

Training course on the Feednetics software

Report on a three training course on the Feednetics software, targeting feed industry, farmers, researchers and environmental authorities [Month 40]

Public and internal webpages

Public and internal webpages for communication and dissemination [Month 2-3].

Training course on Genomic innovations

Report on a training course on Genomic innovations [Month 45]

Training course on Nutritional innovations for superior genetics

Report on a training course on Nutritional innovations for superior genetics [Month 52]

Commercial product launch of FEEDNETICS software

Commercial product launch of Feednetics software (SPAROS) [Month 42].

Publications

How Different Dietary Methionine Sources Could Modulate the Hepatic Metabolism in Rainbow Trout?

Author(s): Chiara Ceccotti; Ilaria Biasato; Laura Gasco; Christian Caimi; Sara Bellezza Oddon; Simona Rimoldi; Fabio Brambilla; Genciana Terova
Published in: Current Issues in Molecular Biology, Issue 44, 7, 2022, Page(s) 3238-3252, ISSN 1467-3045
Publisher: MDPI
DOI: 10.3390/cimb44070223

Genetically superior European sea bass (Dicentrarchus labrax) and nutritional innovations: Effects of functional feeds on fish immune response, disease resistance, and gut microbiota

Author(s): Rimoldi S, Montero D, Torrecillas S, Serradell A, Acosta F, Haffray P, Hostins B, Fontanillas R, Allal F, Bajek A, Terova G.
Published in: Aquaculture Reports, Issue 33, 2023, Page(s) 101747, ISSN 2352-5134
Publisher: Elsevier BV
DOI: 10.1016/j.aqrep.2023.101747

Genotype x nutrition interactions in European sea bass (Dicentrarchus labrax): Effects on gut health and intestinal microbiota

Author(s): Torrecillas S, Rimoldi S, Montero D, Serradell A, Acosta F, Fontanillas R, Allal F, Haffray P, Bajek A, Terova G
Published in: Aquaculture, Issue 574, 739639, 2023, Page(s) 1-22, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2023.739639

Broodstock nutritional programming differentially affects the hepatic transcriptome and genome-wide DNA methylome of farmed gilthead sea bream (Sparus aurata) depending on genetic background

Author(s): F. Naya-Català; A. Belenguer; D. Montero; S. Torrecillas; B. Soriano; J. Calduch-Giner; C. Llorens; R. Fontanillas; S. Sarih; M. J. Zamorano; M. Izquierdo; J. Pérez-Sánchez
Published in: BMC Genomics, Issue 24, 2023, Page(s) 670, ISSN 1471-2164
Publisher: BioMed Central
DOI: 10.1186/s12864-023-09759-7

SAMBA: Structure-Learning of Aquaculture Microbiomes using a Bayesian Approach

Author(s): Beatriz Soriano; Ahmed Ibrahem Hafez; Fernando Naya-Català; Federico Moroni; Roxana Andreea Moldovan; Socorro Toxqui-Rodríguez; María Carla Piazzon; Vicente Arnau; Carlos Llorens; Jaume Pérez-Sánchez
Published in: Genes, Issue Volume 14, issue 8, 2023, Page(s) 1650, ISSN 2073-4425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes14081650

Potential of shrimp waste meal and insect exuviae as sustainable sources of chitin for fish feeds

Author(s): Rimoldi S, Ceccotti C, Brambilla F, Faccenda F, Antonini M, Terova G
Published in: Aquaculture, Issue 567, 739256, 2023, Page(s) 1-12, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2023.739256

Effect of dietary oil from Camelina sativa on the growth performance, fillet fatty acid profile and gut microbiome of gilthead Sea bream ( Sparus aurata )

Author(s): David Huyben, Simona Rimoldi, Chiara Ceccotti, Daniel Montero, Monica Betancor, Federica Iannini, Genciana Terova
Published in: PeerJ, Issue 8, 2020, Page(s) e10430, ISSN 2167-8359
Publisher: PeerJ
DOI: 10.7717/peerj.10430

New value from food and industrial wastes - bioaccumulation of omega-3 fatty acids from an oleaginous microbial biomass paired with a brewery by-product using black soldier fly (Hermetia illucens) larvae.

Author(s): Ceccotti C, Bruno D, Tettamanti G, Branduardi P, Bertacchi S, Labra M, Rimoldi S, Terova G.
Published in: Waste Management, Issue 143, 2022, Page(s) 95-104, ISSN 0956-053X
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.wasman.2022.02.029

The effects of nisin-producing Lactococcus lactis strain used as probiotic on gilthead sea bream (Sparus aurata) growth, gut microbiota, and transcriptional response

Author(s): Moroni Federico, Naya-Català Fernando, Piazzon M. Carla, Rimoldi Simona, Calduch-Giner Josep, Giardini Alberto, Martínez Inés, Brambilla Fabio, Pérez-Sánchez Jaume, Terova Genciana
Published in: Frontiers in Marine Science, Issue Vol. 8, Article 659519, 2021, Page(s) p.364, ISSN 2296-7745
Publisher: Frontiers Media SA
DOI: 10.3389/fmars.2021.659519

Selection for high growth improves reproductive performance of gilthead seabream Sparus aurata under mass spawning conditions, regardless of the dietary lipid source

Author(s): Ferosekhan S, Sarih S, Afonso JM, Zamorano MJ, Fontanillas R, Izquierdo M, Kaushik S, Montero D
Published in: Animal Reproduction Science, Issue 241, 2022, Page(s) 106989, ISSN 0378-4320
Publisher: Elsevier BV
DOI: 10.1016/j.anireprosci.2022.106989

Broodstock nutritional programming differentially affects the hepatic transcriptome and genome-wide DNA methylome of farmed gilthead sea bream (Sparus aurata) depending on genetic background

Effects of full replacement of dietary fishmeal with insect meal from Tenebrio molitor on rainbow trout gut and skin microbiota

Author(s): Genciana Terova, Elisabetta Gini, Laura Gasco, Federico Moroni, Micaela Antonini, Simona Rimoldi
Published in: Journal of Animal Science and Biotechnology, Issue 12/1, 2021, Page(s) 14, ISSN 2049-1891
Publisher: Biomed Central Limited
DOI: 10.1186/s40104-021-00551-9

Potential of low-density genotype imputation for cost-efficient genomic selection for resistance to Flavobacterium columnare in rainbow trout (Oncorhynchus mykiss)

Author(s): Fraslin, C, Robledo D, Kause A, RD Houston
Published in: GSE, Issue 55, 2023, Page(s) 59, ISSN 1297-9686
Publisher: Springer Nature
DOI: 10.1186/s12711-023-00832-z

Nutritional innovations in superior gilthead seabream (Sparus aurata) genotypes: Implications in the utilization of emerging new ingredients through the study of the patterns of secretion of digestive enzymes

Author(s): Montero D, Moyano FJ, CarvalhoM, Sarih S, Fontanillas R, Zamorano MJ, Torrecillas S.
Published in: Aquaculture, Issue 577, 2023, Page(s) 739958, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2023.739958

Realised genetic gains on growth, survival, feed conversion ratio and quality traits after ten generations of multi-trait selection in rainbow trout Oncorhynchus mykiss, fed a standard diet or a “future” fish-free and soy-free diet

Author(s): Marc Vandeputte; Geneviève Corraze; Jérôme Doerflinger; Florian Enez; Frédéric Clota; Frédéric Terrier; Mathilde Horat; Laurence Larroquet; Vincent Petit; Pierrick Haffray; Sandrine Skiba-Cassy; Mathilde Dupont-Nivet
Published in: Aquaculture Reports, Issue 27, 2022, Page(s) 101363 (13 p.), ISSN 2352-5134
Publisher: Elsevier BV
DOI: 10.1016/j.aqrep.2022.101363

Functional Additives in a Selected European Sea Bass (Dicentrarchus labrax) Genotype: Effects on the Stress Response and Gill Antioxidant Response to Hydrogen Peroxide (H2O2) Treatment

Author(s): Antonio Serradell; Daniel Montero; Genciana Terova; Simona Rimoldi; Alex Makol; Félix Acosta; Aline Bajek; Pierrick Haffray; François Allal; Silvia Torrecillas
Published in: Animals (2076-2615) (MDPI AG), 2023-07 , Vol. 13 , N. 14 , P. 2265 (20p.), Issue 13, 2023, Page(s) 2265, ISSN 2076-2615
Publisher: MDPI
DOI: 10.3390/ani13142265

Selection for high growth improves reproductive performance of gilthead seabream Sparus aurata under mass spawning conditions, regardless of the dietary lipid source

Author(s): Shajahan Ferosekhan; Samira Sarih; Juan Manuel Afonso; María Jesús Zamorano; Ramón Fontanillas; Marisol Izquierdo; Sadasivam Kaushik; Daniel Montero
Published in: Animal Reproduction Science, Issue 241, 2022, Page(s) 106989, ISSN 0378-4320
Publisher: Elsevier BV
DOI: 10.1016/j.anireprosci.2022.106989

Improvement in feed efficiency and reduction in nutrient loading from rainbow trout farms: The role of selective breeding

Author(s): Kause A, Nousiainen A, Koskinen H
Published in: Journal of Animal Science, Issue 100, 2022, Page(s) 1-11, ISSN 1525-3163
Publisher: Oxford University Press
DOI: 10.1093/jas/skac214

Structure-Learning of Aquaculture Microbiomes Using a Bayesian Approach

Author(s): Beatriz Soriano; Ahmed Ibrahem Hafez; Fernando Naya-Català; Federico Moroni; Roxana Andreea Moldovan; Socorro Toxqui-Rodríguez; María Carla Piazzon; Vicente Arnau; Carlos Llorens; Jaume Pérez-Sánchez
Published in: Genes, Issue 14, 8, 2023, Page(s) 1650, ISSN 2073-4425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes14081650

Modelling the effect of prebiotics, probiotics and other functional additives on the growth, feed intake and feed conversion of European sea bass (Dicentrarchus labrax) juveniles

Author(s): Serradell A, Torrecillas S, Soares F, Silva T, Montero D
Published in: Aquaculture Reports, Issue 32, 2023, Page(s) 101729, ISSN 2352-5134
Publisher: Elsevier BV
DOI: 10.1016/j.aqrep.2023.101729

Genetics and Nutrition Drive the Gut Microbiota Succession and Host-Transcriptome Interactions through the Gilthead Sea Bream (Sparus aurata) Production Cycle

Author(s): Naya-Català F, Piazzon MC, Torrecillas S, Toxqui-Rodríguez S, Calduch-Giner JÀ, Fontanillas R, Sitjà-Bobadilla A, Montero D, Pérez-Sánchez J
Published in: Biology, Issue 11(12), 2022, Page(s) 1744, ISSN 2079-7737
Publisher: MDPI
DOI: 10.3390/biology11121744

Development and Application of a Mechanistic Nutrient-Based Model for Precision Fish Farming

Author(s): Filipe M. R. C. Soares; Ana M. D. Nobre; Andreia I. G. Raposo; Rodrigo C. P. Mendes; Sofia A. D. Engrola; Paulo J. A. P. Rema; Luís E. C. Conceição; Tomé S. Silva
Published in: Journal of Marine Science and Engineering, Issue 11, 2023, Page(s) 472, ISSN 2077-1312
Publisher: MDPI
DOI: 10.3390/jmse11030472

Functional Additives in a Selected European Sea Bass (Dicentrarchus labrax) Genotype: Effects on the Stress Response and Gill Antioxidant Response to Hydrogen Peroxide (H2O2) Treatment

Author(s): Serradell A, Montero D, Terova G, Rimoldi S, Makol A, Acosta F, Bajek A, Haffray P, Allal F, Torrecillas S
Published in: Animals, Issue 13, 2023, Page(s) 2265, ISSN 2076-2615
Publisher: MDPI
DOI: 10.3390/ani13142265

The European sea bass: a key marine fish model in the wild and in aquaculture

Author(s): M. Vandeputte, P.‐A. Gagnaire, F. Allal
Published in: Animal Genetics, Issue 50/3, 2019, Page(s) 195-206, ISSN 0268-9146
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/age.12779

Sex, Age, and Bacteria: How the Intestinal Microbiota Is Modulated in a Protandrous Hermaphrodite Fish

Author(s): M. Carla Piazzon, Fernando Naya-Català, Paula Simó-Mirabet, Amparo Picard-Sánchez, Francisco J. Roig, Josep A. Calduch-Giner, Ariadna Sitjà-Bobadilla, Jaume Pérez-Sánchez
Published in: Frontiers in Microbiology, Issue 10, 2019, Page(s) Article 2512, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2019.02512

Effects of hydrolyzed fish protein and autolyzed yeast as substitutes of fishmeal in the gilthead sea bream (Sparus aurata) diet, on fish intestinal microbiome

Author(s): S. Rimoldi, E. Gini, J. F. A. Koch, F. Iannini, F. Brambilla, G. Terova
Published in: BMC Veterinary Research, Issue 16/1, 2020, Page(s) 1-13, ISSN 1746-6148
Publisher: BioMed Central
DOI: 10.1186/s12917-020-02335-1

Effects of Partially Defatted Hermetia illucens Meal in Rainbow Trout Diet on Hepatic Methionine Metabolism

Author(s): Genciana Terova, Chiara Ceccotti, Chiara Ascione, Laura Gasco, Simona Rimoldi
Published in: Animals, Issue 10/6, 2020, Page(s) 1059, ISSN 2076-2615
Publisher: MDPI
DOI: 10.3390/ani10061059

Nutritional innovations in superior European sea bass (Dicentrarchus labrax)genotypes: Implications on fish performance and feed utilization

Author(s): D. Montero, M. Carvalho, G. Terova, R. Fontanillas, A. Serradell, R. Gines, V. Tuset, F. Acosta, S. Rimoldi, A. Bajek, P. Haffray, F. Allal, S. Torrecillas
Published in: Aquaculture, Issue 572, 2023, Page(s) 739486, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2023.739486

Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Author(s): M. Carla Piazzon, Fernando Naya-Català, Erick Perera, Oswaldo Palenzuela, Ariadna Sitjà-Bobadilla, Jaume Pérez-Sánchez
Published in: Microbiome, Issue 8/1, 2020, Page(s) 1-17, ISSN 2049-2618
Publisher: BMC Springer Nature
DOI: 10.1186/s40168-020-00922-w

Influence of Genetic Selection for Growth and Broodstock Diet n-3 LC-PUFA Levels on Reproductive Performance of Gilthead Seabream, Sparus aurata

Author(s): Ferosekhan S, Turkmen S, Pérez-García C, Hanlin X, Gómez A, Shamna N, Afonso JM, Rosenlund G, Fontanillas R, Gracia A, Izquierdo MS, Kaushik S
Published in: Animals, Issue 11(2), 2021, Page(s) 519, ISSN 2076-2615
Publisher: MDPI
DOI: 10.3390/ani11020519

Diet and host genetics drive the bacterial and fungal intestinal metatranscriptome of gilthead sea bream

Author(s): Naya-Català F, Piazzon MC, Calduch-Giner JÀ, Sitja-Bobadilla A, Pérez-Sánchez J.
Published in: Frontiers in Microbiology, Issue 13, 2022, Page(s) 883738, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.883738

Genome-wide association and genomic prediction of resistance to Flavobacterium columnare in a farmed rainbow trout population

Author(s): Fraslin C, Koskinen H, Nousianen A, Houston RD, Kause A
Published in: Aquaculture, Issue 557, 2022, Page(s) 738332, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2022.738332

Sustainable fish feeds with insects and probiotics positively affect freshwater and marine fish gut microbiota

Author(s): Hasan I, Rimoldi S, Saroglia G, Terova G
Published in: Animals, Issue 13(10), 1633, 2023, Page(s) 1-17, ISSN 2076-2615
Publisher: MDPI
DOI: 10.3390/ani13101633

Using Glycerol to Produce European Sea Bass Feed With Oleaginous Microbial Biomass: Effects on Growth Performance, Filet Fatty Acid Profile, and FADS2 Gene Expression

Author(s): Genciana Terova, Federico Moroni, Micaela Antonini, Stefano Bertacchi, Chiara Pesciaroli, Paola Branduardi, Massimo Labra, Danilo Porro, Chiara Ceccotti, Simona Rimoldi
Published in: Frontiers in Marine Science, Issue 8, 2021, Page(s) 1115, ISSN 2296-7745
Publisher: Frontiers Media SA
DOI: 10.3389/fmars.2021.715078

Dietary Phytogenics and Galactomannan Oligosaccharides in Low Fish Meal and Fish Oil-Based Diets for European Sea Bass (Dicentrarchus labrax) Juveniles: Effects on Gill Structure and Health and Implications on Oxidative Stress Status

Author(s): Silvia Torrecillas, Genciana Terova, Alex Makol, Antonio Serradell, Victoria Valdenegro-Vega, Marisol Izquierdo, Felix Acosta, Daniel Montero
Published in: Frontiers in Immunology, Issue 12, 2021, Page(s) 18, ISSN 1664-3224
Publisher: Frontiers Media SA
DOI: 10.3389/fimmu.2021.663106

Intestinal microbial communities of rainbow trout (Oncorhynchus mykiss) may be improved by feeding a Hermetia illucens meal/low-fishmeal diet

Author(s): Simona Rimoldi, Micaela Antonini, Laura Gasco, Federico Moroni, Genciana Terova
Published in: Fish Physiology and Biochemistry, 2021, Page(s) 1-16, ISSN 0920-1742
Publisher: Kluwer Academic Publishers
DOI: 10.1007/s10695-020-00918-1

How Different Dietary Methionine Sources Could Modulate the Hepatic Metabolism in Rainbow Trout?

Author(s): Chiara Ceccotti; Ilaria Biasato; Laura Gasco; Christian Caimi; Sara Bellezza Oddon; Simona Rimoldi; Fabio Brambilla; Genciana Terova
Published in: Current Issues in Molecular Biology, Issue 44 (7), 2022, Page(s) 3238–3252, ISSN 1467-3045
Publisher: MDPI
DOI: 10.3390/cimb44070223

Conserved QTL and chromosomal inversions affect resistance to columnaris disease in two rainbow trout (Oncorhyncus mykiss) populations

Author(s): Calboli F, Koskinen H, Nousiainen A, Fraslin C, Houston RD, Kause A
Published in: G3: Genes, Genomes, Genetics, Issue 12, 2022, Page(s) 8, ISSN 2160-1836
Publisher: Genetics Society of America
DOI: 10.1093/g3journal/jkac137

Cellular heterogeneity in red and melanized focal muscle changes in farmed Atlantic salmon (Salmo salar) visualized by spatial transcriptomics

Author(s): H. M. Bjørgen; S. Malik; E. Rimstad; M. Vaadal; I. B. Nyman; E. O. Koppang; T. Tengs
Published in: Cell Tissue Research, Issue 395, 2023, ISSN 1432-0878
Publisher: Springer Nature
DOI: 10.1007/s00441-023-03850-x

Effect of partial substitution of fishmeal with insect meal (Hermetia illucens) on gut neuromuscular function in Gilthead sea bream (Sparus aurata)

Author(s): Annalisa Bosi, Davide Banfi, Federico Moroni, Chiara Ceccotti, Maria Cecilia Giron, Micaela Antonini, Cristina Giaroni, Genciana Terova
Published in: Scientific Reports, Issue 11/1, 2021, Page(s) 21788, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-021-01242-1

Aquaculture ecosystem microbiome at the water-fish interface: the case-study of rainbow trout fed with Tenebrio molitor novel diets

Author(s): Bruno A, Sandionigi A, Panio A, Rimoldi S, Orizio F, Agostinetto G, Hasan I, Gasco L, Terova G, Labra M.
Published in: BMC Microbiology, Issue 23, 248, 2023, Page(s) 1-17, ISSN 1471-2180
Publisher: BioMed Central
DOI: 10.1186/s12866-023-02990-y

Balanced replacement of fish meal with Hermetia illucens meal allows efficient hepatic nutrient metabolism and increases fillet lipid quality in gilthead sea bream (Sparus aurata)

Author(s): Anedda R, Melis R, Palomba A, Vitangeli I, Biosa G, Braca A, Antonini M, Moroni F, Rimoldi S, Terova G, Pagnozzi D.
Published in: Aquaculture, Issue 576, 2023, Page(s) 739862, ISSN 0044-8486
Publisher: Elsevier BV
DOI: 10.1016/j.aquaculture.2023.739862

SAMBA: A Bayesian network application to predict changes in the composition and function of mucosal microbiome in farmed fish

Author(s): Soriano, Beatriz; Hafez, Ahmed; Naya-Català, Fernando; Toxqui-Rodríguez, S.; Piazzon de Haro, María Carla; Arnau, Vicente; Sitjà-Bobadilla, Ariadna; Llorens, Carlos; Pérez-Sánchez, Jaume
Published in: 6th International Symposium on Genomics in Aquaculture, Granada, 4-6 May 2022, 2022
Publisher: International Association of Genetics in Aquaculture (IAGA)

Genetic validation of the Xray method for phenotyping feed intake in Atlantic salmon

Author(s): Difford GF, Hatlen B, Gjerde B, Romarheim OH, Baeverfjord G, Heia K, Norris A, Sonesson AK
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 322-323
Publisher: European Aquaculture Society

Diet and host genetic background drive differences in the transcriptomic profile of intestinal microbiota in gilthead sea bream

Author(s): Piazzon MC, Naya-Català F, Sitjà-Bobadilla A, Pérez-Sánchez J
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 995-996
Publisher: European Aquaculture Society

"Effect of 10 generations of selection on growth, feed efficiency, processing and lipid traits in rainbow trout fed a standard or a ""future"" fish-free, soy-free diet"

Author(s): Vandeputte, Marc; Corraze, Geneviève; Doerflinger, Jérôme; Enez, Florian; Clota, Frédéric; Terrier, Frédéric; Horat, Mathilde; Larroquet, Laurence; Petit, Vincent; Imarazene, Boudjema; Haffray, Pierrick; Skiba-Cassy, Sandrine; Dupont-Nivet, Mathilde
Published in: International Symposium on Genetics In Aquaculture 2022, Issue 27.11.-2.12.2022, 2022
Publisher: International Association of Genetics in Aquaculture (IAGA)

Genomic selection of resistance to Flavobacterium columnare in rainbow trout using low density SNP panels

Author(s): Fraslin C, Kause A, Nousiainen A, Koskinen H, Houston RD
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 445-446
Publisher: European Aquaculture Society

"Evaluation of genetic gain in rainbow trout fed standard or ""future"" diet after 10 generations of multi-trait selection in the Aqualande selective breeding program"

Author(s): Vandeputte M, Corraze G,Doerflinger J, Enez F, Clota F, Terrier F, Horat M, Larroquet L, Dechamp N, Petit V, Haffray P, Skiba-Cassy S and Dupont-Nivet M
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 615-616
Publisher: European Aquaculture Society

Genetically superior sea bass (Dicentrarchus labrax) and nutritional innovations: effects on gut microbiota

Author(s): Rimoldi S, Montero D, Torrecillas S, Serradell A, Haffray P, Hostins B, Fontanillas R, Allal F, Bajek A, Terova G
Published in: Balanced Diversity in Aquaculture Development, Book of Abstracts, Aquaculture Europe 2023, Vienna Austria, 18.-21.9.2023., 2023, Page(s) 1215-1216
Publisher: European Aquaculture Society

Pigment QTL genotype by diet interaction on growth in Atlantic salmon (Salmo salar)

Author(s): Sae-Lim P, Boison S, Gonen S, Baranski M, Stene JÅ, Rosenlund G, Hatlen B, Ruyter B, Fontanillas R, Martinez Rubio L, Norris A
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 886-887
Publisher: European Aquaculture Society

Functional additives in selected European sea bass Dicentrarchus labrax genotype: effects on stress response and Gill antioxidant response

Author(s): Serradell A, Torrecillas S, Makol A, Acosta F, Izquierdoa MS, Allal F, Haffray P, Bajek A, Montero D
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 1190-1191
Publisher: European Aquaculture Society

The use of a nutrient-based model as a decision tool to support the design of nutritional experiments

Author(s): Mendes R, Soares F, Silva T, Nobre A, Conceição L
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 815-816
Publisher: European Aquaculture Society

Role of selective breeding in the improvement of feed efficiency at rainbow trout farms

Author(s): Kause A, Nousiainen A and Koskinen H
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 298-299
Publisher: European Aquaculture Society

Single-step genomic evaluation for body weight and maturity age in Finnish rainbow trout

Author(s): Kudinov A, Nousiainen A, Koskinen H, Kause A
Published in: Balanced Diversity in Aquaculture Development, Book of Abstracts, Aquaculture Europe 2023, Vienna Austria, 18.-21.9.2023., 2023, Page(s) 743-744
Publisher: European Aquaculture Society

Selective genotyping strategies for genomic selection for a disease resistance traits

Author(s): Dagnachew BS, Norris A, Sonesson A
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 295-296
Publisher: European Aquaculture Society

The impact of genetic selection for fast growth on the effeciency of gilthead sea bream (Sparus aurata) in using novel diets

Author(s): Carvalho M, Torrecillas S, Ginés R, Martín I, Zamorano MJ, Acosta F, Fontanillas R, Montero D
Published in: Balanced Diversity in Aquaculture Development, Book of Abstracts, Aquaculture Europe 2023, Vienna Austria, 18.-21.9.2023., 2023, Page(s) 254-255
Publisher: European Aquaculture Society

Microbiota at the water-fish interface: the case study of rainbow trout fed with a novel feed formulation containing Tenebrio molitor meal

Author(s): Hasan I, Bruno A, Sandionigi A, Rimoldi S, Gasco L, Labra M, Terova G
Published in: Balanced Diversity in Aquaculture Development, Book of Abstracts, Aquaculture Europe 2023, Vienna Austria, 18.-21.9.2023., 2023, Page(s) 577-578
Publisher: European Aquaculture Society

Integrating selective breeding into commercial production of aquaculture species

Author(s): Benan Gulzari, John WM Bastiaansen, Hans Komen
Published in: WIAS annual conference proceedings 2020, 2021, Page(s) 58
Publisher: Wageningen Institute of Animal Sciences

Defining trout nutritional requirements for the future by revisiting the past

Author(s): Silva TS, Kause A, Soares F, Nobre A, Dias J, Conceição LEC
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 1200-1201
Publisher: European Aquaculture Society

Genomic basis of resistance to Flavobacterium columnare in rainbow trout

Author(s): Fraslin C, Nousiainen A, Koskinen H, Houston RD and Kause A
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 223-224
Publisher: European Aquaculture Society

Nutritional innovations in superior European sea bass Dicentrarchus labrax genotypes: implications in fish performance and gut health

Author(s): Montero D, Torrecillas S, Rimoldi S, Serradell A, Fontanillas R, Acosta F, Allal F, Haffray P, Bajek A, Terova G
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 830-831
Publisher: European Aquaculture Society

Phenotypic and genomic correlations between feed efficiency and metabolic traits in European sea bass

Author(s): Besson M, McKenzie DJ, Nati J, Salou G, Vergnet A, Brunier J, Bajek A, Haffray P, Vandeputte M, Allal F
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 146-147
Publisher: European Aquaculture Society

European consumers’ awareness and informational needs for fish farming practices

Author(s): Latvala T, Mariojouls C, Ginés R, Muller L, Kause A
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 770-771
Publisher: European Aquaculture Society

Comparing selection response and inbreeding level in family and group mating designs of sea bream and sea bass

Author(s): Roozeboom C, Komen H and Bastiaansen JWM
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 510-511
Publisher: European Aquaculture Society

European consumers’ perception of fish farming and need for information

Author(s): Mariojouls C, Latvala T, Ginés R, Muller L, Kause A
Published in: Aquaculture Europe 2022, Innovative solutions in a changing world, Rimini, Italy, September 27-30, 2022, Abstracts, 2022, Page(s) 787-788
Publisher: European Aquaculture Society

Do consumers want information about aquaculture?

Author(s): Mariojouls C, Latvala T, Gines R and Muller L
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 355-356
Publisher: European Aquaculture Society

Interaction between dietary omega-3 fatty acids and fillet color in Atlantic salmon (Salmo salar): A transcriptome study

Author(s): Lutfi E, Velzi S, Horn S, Krasnov A, Ytrestøyl T, Ruyter B, Norris A, Hatlen B
Published in: Aquaculture Europe 2022, Innovative solutions in a changing world, Rimini, Italy, September 27-30, 2022, Abstracts, 2022, Page(s) 753-754
Publisher: European Aquaculture Society

Optimizing a rainbow trout breeding program with genomic selection

Author(s): Roozeboom C, Kause A, Camara M, Komen H, Bastiaansen JWM
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 1112-1113
Publisher: European Aquaculture Society

Multi-trait approach for utilising multi-generation data for genomic prediction in Atlantic salmon

Author(s): Dagnachew BS, Norris A, Gonen S, Sonesson A
Published in: Aquaculture Europe 2022, Innovative solutions in a changing world, Rimini, Italy, September 27-30, 2022, Abstracts, 2022, Page(s) 311-312
Publisher: European Aquaculture Society

Genomic and nutritional innovations for genetically superior farmed fish

Author(s): Kause, A.
Published in: Aquaculture Europe 19 congress, Berlin, Germany, October 7-10 2019. Our future growing from water. Book of Abstracts, 2019, Page(s) p. 668
Publisher: European Aquaculture Society

Development of feeds and feeding strategies for genetically superior fish from breeding programmes

Author(s): Montero D, Torrecillas S, Tocher DR, Vandeputte M, Fontanillas R, Rosenlund G, Haffray P, Ruyter B, Sonesson A, Bastiaansen J & Kause A
Published in: Aquaculture Europe 19 congress, Berlin, Germany, October 7-10 2019. Our future growing from water. Book of Abstracts, 2019, Page(s) p. 954-955
Publisher: European Aquaculture Society

The impact of genomic selection in commercial breeding programmes for four important species in European aquaculture

Author(s): Bastiaansen, J.W.M
Published in: Aquaculture Europe 19 congress, Berlin, Germany, October 7-10 2019. Our future growing from water. Book of Abstracts, 2019, Page(s) p.137
Publisher: European Aquaculture Society

Improvement in resource efficiency and reduction in nutrient loading from rainbow trout farms: The role of selective breeding

Author(s): Kause A, Koskinen H & Nousiainen A
Published in: AquaFarm2020 congress, Session: EuroAquaculture - Research projects for a unified development., 2020
Publisher: AquaFarm

Assessment of a “Future practical” diet on gut microbiota of genetically selected or not selected strain of European sea bass (Dicentrarchus labrax)

Author(s): Rimoldi S, Torrecillas S, Montero D, Serradell A, Fontanillas R & Terova G
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 496-497
Publisher: European Aquaculture Society

Interaction of diet, host genetics and gut microbiota during the production cycle of gilthead sea bream

Author(s): Naya-Català F, Piazzon MC, Torrecillas S, Calduch-Giner JA, Fontanillas R, Sitjà-Bobadilla A, Montero D, Pérez-Sánchez J
Published in: Aquaculture Europe 2022, Innovative solutions in a changing world, Rimini, Italy, September 27-30, 2022, Abstracts, 2022, Page(s) 919-920
Publisher: European Aquaculture Society

Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Author(s): Piazzon MC, Naya-Català F, Perera E, Palenzuela O, Sitjà-Bobadilla A and Pérez-Sánchez J
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 446-447
Publisher: European Aquaculture Society

Genomic analysis of a downgrading trait in Atlantic salmon using field data

Author(s): Sonesson AK, Storteig Horn S, Nordstoga R, Luqman Aslam M, Lefrancois A, Pedersen IM, Norris A
Published in: Balanced Diversity in Aquaculture Development, Book of Abstracts, Aquaculture Europe 2023, Vienna Austria, 18.-21.9.2023., 2023, Page(s) 1395-1396
Publisher: European Aquaculture Society

Assessing early utilisation of vegetable-based feed and its possible interaction with genotype and epigenetics in Atlantic salmon

Author(s): Fernández K, McMillan S, Sprague M, Martínez-Rubio L, Norris A, Stubhaug I, Mukiibi R, Robledo D, Betancor MB
Published in: Balanced Diversity in Aquaculture Development, Book of Abstracts, Aquaculture Europe 2023, Vienna Austria, 18.-21.9.2023., 2023, Page(s) 429-430
Publisher: European Aquaculture Society

The genetic background drives the reshape of gut microbiome by feed additives in farmed gilthead sea bream (Sparus aurata)

Author(s): Naya-Català, Fernando; Piazzon de Haro, María Carla; Torrecillas, S.; Fontanillas, Ramón; Hostins, B.; Calduch-Giner, Josep A.; Sitjà-Bobadilla, Ariadna; Montero, D.; Pérez-Sánchez, Jaume
Published in: 6th International Symposium on Genomics in Aquaculture, Granada, 4-6 May 2022, 2022, Page(s) 67
Publisher: International Association of Genetics in Aquaculture (IAGA)

Effects of full replacement of dietary fishmeal with insect meal from Tenebrio molitor on rainbow trout gut and skin microbiota

Author(s): Terova G, Gasco L, Moroni F, Antonini M, Saroglia M and Rimoldi S
Published in: Aquaculture Europe 2020, online, April 12-15 2021. Conference, Eposters & e-Market, 2021, Page(s) 576-577
Publisher: European Aquaculture Society

Nutritional innovations in superior european sea bass (Dicentrarchus labrax) genotypes: effects of functional feeds on fish performance, disease resistance and gut health.

Author(s): Torrecillas S, Terova G, Serradell A, Rimoldi S, Acosta F, Hostins B, Fontanillas R, Allal F, Haffray P, Bajek A, Castro P, Montero D
Published in: Aquaculture Europe 2022, Innovative solutions in a changing world, Rimini, Italy, September 27-30, 2022, Abstracts, 2022, Page(s) 1305-1306
Publisher: European Aquaculture Society

The effect of genetic improvements on optimal fish feed formulation: a traits-to-feed framework

Author(s): Silva T, Soares F, Nobre A, Conceição L, Kause A
Published in: Balanced Diversity in Aquaculture Development, Book of Abstracts, Aquaculture Europe 2023, Vienna Austria, 18.-21.9.2023., 2023, Page(s) 1356-1357
Publisher: European Aquaculture Society

Genetic correlations between processing traits and individual feed efficiency in a gilthead sea bream (Sparus aurata) commercial line

Author(s): Bestin A, Besson M, Vergnet A, Allal F, Clota F, Cariou S, Bruant J-S, Haffray P, Vandeputte M
Published in: Aquaculture Europe 2021, Oceans of opportunity, Madeira, Portugal, October 4-7, 2021, Abstracts, 2021, Page(s) 148-149
Publisher: European Aquaculture Society

Highlights from gut microbiota survey in farmed fish - European sea bass and gilthead sea bream case studies

Author(s): Terova G, Naya-Català F, Rimoldi S, Piazzon MC, Torrecillas S, Toxqui MS, Fontanillas R, Calduch-Giner J, Hostins B, Sitjà-Bobadilla A, Montero D, Pérez-Sánchez J.
Published in: Aquaculture Europe, Issue 47, 2022, Page(s) 1, ISSN 0773-6940
Publisher: European Aquaculture Society

Additional file 4 of Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Author(s): M. Carla Piazzon; Naya-Catal��, Fernando; Perera, Erick; Palenzuela, Oswaldo; Sitj��-Bobadilla, Ariadna; P��rez-S��nchez, Jaume
Published in: Issue 3, 2020
Publisher: BMC Springer Nature
DOI: 10.6084/m9.figshare.13278407.v1

Additional file 3 of Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Author(s): M. Carla Piazzon; Naya-Catal��, Fernando; Perera, Erick; Palenzuela, Oswaldo; Sitj��-Bobadilla, Ariadna; P��rez-S��nchez, Jaume
Published in: Issue 4, 2020
Publisher: BMC Springer Nature
DOI: 10.6084/m9.figshare.13278404.v1

Additional file 2 of Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Author(s): M. Carla Piazzon; Naya-Catal��, Fernando; Perera, Erick; Palenzuela, Oswaldo; Sitj��-Bobadilla, Ariadna; P��rez-S��nchez, Jaume
Published in: Issue 2, 2020
Publisher: BMC Springer Nature
DOI: 10.6084/m9.figshare.13278401.v1

Additional file 1 of Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Questionnaire of the consumer research in AquaIMPACT project

Author(s): Latvala, Terhi; Mariojouls, Catjerine; Gines, Rafael; Muller, Laurent
Published in: Questionnaire of the consumer research in AquaIMPACT project, 2023
Publisher: Authors
DOI: 10.5281/zenodo.10527742

Additional file 7 of Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Author(s): M. Carla Piazzon; Naya-Catal��, Fernando; Perera, Erick; Palenzuela, Oswaldo; Sitj��-Bobadilla, Ariadna; P��rez-S��nchez, Jaume
Published in: Issue 1, 2020
Publisher: BMC Springer Nature
DOI: 10.6084/m9.figshare.13278416

IMPUTATION TO AND USE OF WHOLE GENOME SEQUENCING FOR FINE MAPPING AND GENOMIC PREDICTION IN ATLANTIC SALMON

Author(s): Onabanjo, Olumide Victor
Published in: 2023
Publisher: Norwegian University of Life Sciences

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