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A global multi-institutional Typhoid fever genomic surveillance network to improve global public health outcomes


Multiple introductions of multidrug-resistant typhoid associated with acute infection and asymptomatic carriage, Kenya

Author(s): Samuel Kariuki; Zoe A. Dyson; Cecilia Mbae; Ronald Ngetich; Susan Kavai; Celestine Wairimu; Stephen Anyona; Naomi Gitau; Robert S. Onsare; Beatrice Ongandi; Sebastián Duchêne; Mohamed Ali; John D. Clemens; Kathryn E. Holt; Gordon Dougan
Published in: eLife, 2021, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.17863/cam.76973

Whole genome sequence analysis of Salmonella Typhi in Papua New Guinea reveals an established population of genotype 2.1.7 sensitive to antimicrobials

Author(s): Zoe Anne Dyson; Elisheba Malau; Paul F. Horwood; Rebecca Ford; Valentine Siba; Mition Yoannes; William Pomat; Megan Passey; Louise M. Judd; Danielle J. Ingle; Deborah A. Williamson; Gordon Dougan; Andrew R. Greenhill; Kathryn E. Holt
Published in: PLoS Neglected Tropical Diseases, 2022, ISSN 1935-2727
Publisher: Public Library of Science
DOI: 10.1371/journal.pntd.0010306

Five Years of GenoTyphi: Updates to the Global Salmonella Typhi Genotyping Framework

Author(s): Zoe Anne Dyson and Kathryn Elizabeth Holt
Published in: The Journal of Infectious Diseases, 2021, ISSN 1537-6613
Publisher: Oxford University Press
DOI: 10.1093/infdis/jiab414

A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch

Author(s): Silvia Argimón, Corin A. Yeats, Richard J. Goater, Khalil Abudahab, Benjamin Taylor, Anthony Underwood, Leonor Sánchez-Busó, Vanessa K. Wong, Zoe Anne Dyson, Satheesh Nair, Se Eun Park, Florian Marks, Andrew J. Page, Jacqueline A. Keane, Stephen Baker, Kathryn Elizabeth Holt, Gordon Dougan & David M. Aanensen
Published in: Nature Communications, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-23091-2

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