The Fluctuating Enzyme: From Catalysis to Vibrational Dynamics

Project Information

FLUCTENZ

Grant agreement ID: 947731

DOI 10.3030/947731

EC signature date 20 August 2020

Start date 1 August 2021

End date 31 July 2026

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost € 1 496 875,00

EU contribution € 1 496 875,00

Coordinated by

TEL AVIV UNIVERSITY
Israel

Publications

Non-peer reviewed articles (1)

Preface: stochastic resetting—theory and applications

Author(s): Anupam Kundu; Shlomi Reuveni
Published in: Journal of Physics A: Mathematical and Theoretical, Issue 2, 2024, ISSN 1751-8121
Publisher: IOP Publishing
DOI: 10.1088/1751-8121/ad1e1b

Peer reviewed articles (16)

The inspection paradox in stochastic resetting

Author(s): Arnab Pal; Sarah Kostinski; Shlomi Reuveni
Published in: Journal of Physics A: Mathematical and Theoretical, 2022, ISSN 1751-8121
Publisher: Institute of Physics
DOI: 10.1088/1751-8121/ac3cdf

Diffusion with partial resetting

Author(s): Ofir Tal-Friedman, Yael Roichman, and Shlomi Reuveni
Published in: Physical Review E, 2022, ISSN 2470-0053
Publisher: American Physical Society
DOI: 10.1103/physreve.106.054116

Enzymatic Activity Profiling Using an Ultrasensitive Array of Chemiluminescent Probes for Bacterial Classification and Characterization

Author(s): Omri Shelef, Tal Kopp, Rozan Tannous, Maxence Arutkin, Moriah Jospe-Kaufman, Shlomi Reuveni, Doron Shabat, and Micha Fridman
Published in: Journal of the American Chemical Society, Issue 146, 2024, ISSN 1520-5126
Publisher: American Chemical Society
DOI: 10.1021/jacs.3c11790

Combining stochastic resetting with Metadynamics to speed-up molecular dynamics simulations

Author(s): Ofir Blumer, Shlomi Reuveni, Barak Hirshberg
Published in: Nature communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-44528-w

Microscopic theory of adsorption kinetics

Author(s): Yuval Scher, Ofek Lauber Bonomo, Arnab Pal, Shlomi Reuveni
Published in: The Journal of Chemical Physics, 2023, ISSN 1089-7690
Publisher: American Institute of Physics
DOI: 10.1063/5.0121359

Doubly stochastic continuous time random walk

Author(s): Arutkin, Maxence; Reuveni, Shlomi
Published in: Phys. Rev. Research, Issue 2, 2023, ISSN 2643-1564
Publisher: American Physical Society
DOI: 10.1103/physrevresearch.6.l012033

Short-Time Infrequent Metadynamics for Improved Kinetics Inference

Author(s): Ofir Blumer; Shlomi Reuveni; Barak Hirshberg
Published in: J. Chem. Theory Comput., Issue 20, 9, 2024, Page(s) 3484, ISSN 1549-9626
Publisher: American Chemical Society
DOI: 10.1021/acs.jctc.4c00170

Loss of percolation transition in the presence of simple tracer-media interactions

Author(s): Ofek Lauber Bonomo; Shlomi Reuveni
Published in: Phys. Rev. Research, Issue 2, 2023, ISSN 2643-1564
Publisher: American Physical Society
DOI: 10.1103/physrevresearch.5.l042015

Inference from gated first-passage times

Author(s): Aanjaneya Kumar; Yuval Scher; Shlomi Reuveni; M. S. Santhanam
Published in: Phys. Rev. Research, Issue 2, 2023, ISSN 2643-1564
Publisher: American Physical Society
DOI: 10.1103/physrevresearch.5.l032043

Stochastic Resetting for Enhanced Sampling

Author(s): Ofir Blumer; Shlomi Reuveni; Barak Hirshberg
Published in: The Journal of Physical Chemistry Letters, Issue 2, 2022, ISSN 1948-7185
Publisher: American Chemical Society
DOI: 10.1021/acs.jpclett.2c03055

Escape from textured adsorbing surfaces

Author(s): Scher, Yuval; Reuveni, Shlomi; Grebenkov, Denis S.
Published in: J. Chem. Phys., Issue 160, 2024, Page(s) 184105, ISSN 0021-9606
Publisher: American Institute of Physics
DOI: 10.1063/5.0196981

Escape of a sticky particle

Author(s): Yuval Scher; Shlomi Reuveni; Denis S. Grebenkov
Published in: Phys. Rev. Research, Issue 5, 2023, ISSN 2643-1564
Publisher: American Physical Society
DOI: 10.1103/physrevresearch.5.043196

Diversity of sharp restart

Author(s): Iddo Eliazar, Shlomi Reuveni
Published in: Journal of Physics A: Mathematical and Theoretical, 2023, ISSN 1751-8121
Publisher: Institute of Physics
DOI: 10.1088/1751-8121/acb184

Mitigating long queues and waiting times with service resetting

Author(s): Shlomi Reuveni; Ofek Lauber; Arnab Pal
Published in: PNAS NEXUS, Issue 5, 2022, ISSN 2752-6542
Publisher: Oxford Academic
DOI: 10.1093/pnasnexus/pgac070

Entropy of sharp restart

Author(s): Iddo Eliazar, Shlomi Reuveni
Published in: Journal of Physics A: Mathematical and Theoretical, 2023, ISSN 1751-8121
Publisher: Institute of Physics
DOI: 10.1088/1751-8121/acb183

Environmental memory facilitates search with home returns

Author(s): Altshuler, Amy; Bonomo, Ofek Lauber; Gorohovsky, Nicole; Marchini, Shany; Rosen, Eran; Tal-Friedman, Ofir; Reuveni, Shlomi; Roichman, Yael
Published in: Phys. Rev. Research, Issue 6, 2024, Page(s) 023255, ISSN 2643-1564
Publisher: American Physical Society
DOI: 10.1103/physrevresearch.6.023255