Unravelling the pRotein Allosterome of Gene Expression

Project Information

proteoRAGE

Grant agreement ID: 948544

DOI

10.3030/948544

EC signature date 20 August 2020

Start date 1 July 2021

End date 31 August 2027

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 684 594,00

EU contribution

€ 1 684 594,00

Coordinated by

MAX DELBRUECK CENTRUM FUER MOLEKULARE MEDIZIN IN DER HELMHOLTZ-GEMEINSCHAFT (MDC)
Germany

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (8)

Pooled overexpression screening identifies PIPPI as a novel microprotein involved in the ER stress response

Author(s): Lorenzo Lafranchi, Glancis Luzeena Raja, Alberto M Arenas, Anna Spinner, Kovi R Shrung, Maximilian Hornisch, Dörte Schlesinger, Carmen Navarro Luzon, Linus Brinkenstråhle, Rui Shao, Ilaria Piazza, Janne Lehtiö, Rui M M Branca, Simon J Elsӓsser
Published in: Nucleic Acids Research, Issue 53, 2025, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkaf1072

The potential of cross-linking mass spectrometry in the development of protein–protein interaction modulators

Author(s): Max Ruwolt; Ilaria Piazza; Fan Liu
Published in: Current Opinion in Structural Biology, 2023, ISSN 0959-440X
Publisher: Elsevier BV
DOI: 10.1016/j.sbi.2023.102648

Regulation of gene expression through protein-metabolite interactions

Author(s): Maximilian Hornisch, Ilaria Piazza
Published in: npj Metabolic Health and Disease, Issue 3, 2025, ISSN 2948-2828
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/s44324-024-00047-w

Differential regulation of mRNA stability modulates transcriptional memory and facilitates environmental adaptation

Author(s): Bignan Li, Patrice Zeis, Jujie Zhang, Alisa Alekseenko, Eliska Fuerst, Yerma Pareja Sanchez, Ge Lin, Manu Tekkedil, Ilaria Piazza, Lars Steinmetz, Vicent Pelechano
Published in: Nature Communications, 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-36586-x

Benchmarking of Quantitative Proteomics Workflows for Limited Proteolysis Mass Spectrometry

Author(s): Tomas Koudelka, Claudio Bassot, Ilaria Piazza
Published in: Molecular & Cellular Proteomics, Issue 24, 2025, Page(s) 100945, ISSN 1535-9476
Publisher: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1016/j.mcpro.2025.100945

Ribosomes modulate transcriptome abundance via generalized frameshift and out-of-frame mRNA decay

Author(s): Yujie Zhang, Lilit Nersisyan, Eliska Fürst, Ioannis Alexopoulos, Carlos Santolaria, Susanne Huch, Claudio Bassot, Elena Garre, Per Sunnerhagen, Ilaria Piazza, Vicent Pelechano
Published in: Molecular Cell, Issue 85, 2025, Page(s) 2017-2031.e7, ISSN 1097-2765
Publisher: Cell Press
DOI: 10.1016/j.molcel.2025.04.022

Comparison of Xrn1 and Rat1 5′ → 3′ exoribonucleases in budding yeast supports the specific role of Xrn1 in cotranslational mRNA decay

Author(s): José E. Pérez‐Ortín, Antonio Jordán‐Pla, Yujie Zhang, Jorge Moreno‐García, Claudio Bassot, Marina Barba‐Aliaga, Leire de Campos‐Mata, Mordechai Choder, Juana Díez, Ilaria Piazza, Vicent Pelechano, José García‐Martínez
Published in: Yeast, Issue 41, 2024, Page(s) 458-472, ISSN 0749-503X
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/yea.3968

The rise of proteome-wide biophysics

Author(s): Andre Mateus, Mikhail Savitski, Ilaria Piazza
Published in: Molecular Systems Biology, 2021, ISSN 1744-4292
Publisher: Nature Publishing Group
DOI: 10.15252/msb.202110442