In situ DNA sequencing-based microscopy for subcellular spatial transcriptomics

Project Information

DNA_MICROSCOPY

Grant agreement ID: 949624

DOI

10.3030/949624

EC signature date 27 October 2020

Start date 1 May 2021

End date 31 October 2026

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 499 947,00

EU contribution

€ 1 499 947,00

Coordinated by

KUNGLIGA TEKNISKA HOEGSKOLAN
Sweden

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (3)

Hidden network preserved in Slide-tags data allows reference-free spatial reconstruction

Author(s): Simon K. Dahlberg, David Fernández Bonet, Lovisa Franzén, Patrik L. Ståhl, Ian T. Hoffecker
Published in: Nature Communications, Issue 16, 2025, Page(s) 9652, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-025-65295-w

Image recovery from unknown network mechanisms for DNA sequencing-based microscopy

Author(s): David Fernandez Bonet and Ian T. Hoffecker
Published in: Nanoscale, 2023, ISSN 2040-3364
Publisher: Royal Society of Chemistry
DOI: 10.1039/d2nr05435c

Spatial coherence in DNA barcode networks

Author(s): David Fernandez Bonet, Johanna I. Blumenthal, Shuai Lang, Simon K. Dahlberg, Ian T. Hoffecker
Published in: Patterns, Issue 6, 2025, Page(s) 101428, ISSN 2666-3899
Publisher: Elsevier BV
DOI: 10.1016/j.patter.2025.101428