INNOVATION HUB FOR SURFACE AND COLLOID BIOLOGY RESEARCH

Project Information

SurfBio

Grant agreement ID: 952379

DOI 10.3030/952379

Project closed

EC signature date 10 June 2020

Start date 1 December 2020

End date 30 November 2023

Funded under

• Twinning of research institutions

Total cost € 899 947,50

EU contribution € 899 947,50

Coordinated by

INSTITUT JOZEF STEFAN
Slovenia

Deliverables

Other (2)

Handbook on the procedures for culturing and spectrometry techniques application in cell aggregation and biofilm development studies
Handbook of good practices for FAIR data management

Websites, patent fillings, videos etc. (16)

Industrial engagement communication activities & Database of the SurfBio community version 1

Industrial engagement communication activities Database of the SurfBio community identifying and updating commercial potential for Innovation Hub services Responsible JSI supported by UBU M12 M24 M36

Webinar on metabolomics analytical approaches
Proceedings book from the Industrial workshops and strategic lessons

Proceedings book from the Industrial workshops and strategic lessons Leader JSI supported by AXIA

Webinar on sample preparation and state of the art technologies for proteomics analysis.

Webinar on sample preparation and state of the art technologies for proteomics analysis

Roadmap to prepare the SurfBio interactome database for interaction of microbes with materials
Proceedings book from the Policy workshops and strategic lessons

Proceedings book from the Policy workshops and strategic lessons Leader JSI supported by AXIA

Webinar focused on the procedures for analysis of surface and colloid interactions and properties by interferometric microscopy and innovative radiolabelling approaches
Industrial engagement communication activities & Database of the SurfBio community version 3

Industrial engagement communication activities Database of the SurfBio community identifying and updating commercial potential for Innovation Hub services Responsible JSI supported by UBU M12 M24 M36

Webinar on transcriptomics analysis: from experimental design to data analysis.

Webinar on transcriptomics analysis from experimental design to data analysis

Webinar focused on the procedures for analysis of colloid interactions and properties by AFM-RAMAN microscopy and other spectroscopy methods

Webinar focused on the procedures for analysis of colloid interactions and properties by AFMRAMAN microscopy and other spectroscopy methods

SurfBio project website
Report on training contents for senior researchers and webinars proposal
Webinar on computational methods for omics data analysis and integration
New 4 curricula developed at JSI

New 4 curricula developed at JSI Leader JSI supported by UBU

MOOC on Project Management report and strategy definition
Industrial engagement communication activities & Database of the SurfBio community version 2

Industrial engagement communication activities Database of the SurfBio community identifying and updating commercial potential for Innovation Hub services Responsible JSI supported by UBU M12 M24 M36

Documents, reports (1)

Evolution of the publications in high impact journals in the relevant research fields

The task will be to introduce in the Continuous reporting tool on the Funding and tenders portal before the end of month 2 of the project peerreviewed publications in the particular field of research of the coordinating entity during the three years preceding the start date of the project Please note that after the end of the second month the encoding of previous publications will not be possible After this date only the projectrelated current publications should be added to the list The deliverable will be a onepage statement that the task has been completed

Publications

Peer reviewed articles (49)

"Modification of bacterial cells for in vivo remotely guided systems ""(SurfBio project related publication, RP2)”"

Author(s): Rybkin I, Pinyaev S, Sindeeva O, German S, Koblar M, Pyataev N, Čeh M, Gorin D, Sukhorukov G and Lapanje A
Published in: Frontiers in Bioengineering and Biotechnology, 2023, ISSN 2296-4185
Publisher: Frontiers
DOI: 10.3389/fbioe.2022.1070851

"Advances in experimental and computational methodologies for the study of microbial-surface interactions at different omics levels ""(SurfBio project related publication, RP2)"""

Author(s): González-Plaza, J. J., Furlan, C., Rijavec, T., Lapanje, A., Barros, R., Tamayo-Ramos, J. A., & Suarez-Diez, M
Published in: Frontiers in Microbiology, 2022, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.1006946

When Beneficial Biofilm on Materials Is Needed: Electrostatic Attachment of Living Bacterial Cells Induces Biofilm Formation “(project related publication after the start date of SurfBio project)”

Author(s): Deev, Dmitrii, Iaroslav Rybkin, Tomaž Rijavec, Ales Lapanje
Published in: Frontiers in Materials, 2021, ISSN 2296-8016
Publisher: Frontiers Media
DOI: 10.3389/fmats.2021.624631

"Europium(III) as luminescence probe for interactions of a sulfate-reducing microorganism with potentially toxic metals ""(SurfBio project related publication, RP2)"""

Author(s): S. Hilpmann, H. Moll, B. Drobot, M. Vogel, R. Hübner, T. Stumpf, A. Cherkouk
Published in: Ecotoxicology and Environmental Safety, 2023, ISSN 1090-2414
Publisher: Elsevier
DOI: 10.1016/j.ecoenv.2023.115474

An environmentally relevant concentration of titanium dioxide (TiO2) nanoparticles induces morphological changes in the mouthparts of Chironomus tentans

Author(s): Dimitrija Savić-Zdravković, Boris Jovanović, Aca Đurđević, Milica Stojković-Piperac, Ana Savić, Janja Vidmar, Djuradj Milošević
Published in: Chemosphere, Issue 211, 2018, Page(s) 489-499, ISSN 0045-6535
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.chemosphere.2018.07.139

Nanofibers with Incorporated Autochthonous Bacteria as Potential Probiotics for Local Treatment of Periodontal Disease

Author(s): Špela Zupančič, Tomaž Rijavec, Aleš Lapanje, Milan Petelin, Julijana Kristl, Petra Kocbek
Published in: Biomacromolecules, Issue 19/11, 2018, Page(s) 4299-4306, ISSN 1525-7797
Publisher: American Chemical Society
DOI: 10.1021/acs.biomac.8b01181

A Bond-Fluctuation Model of Translational Dynamics of Chain-like Particles through Mucosal Scaffolds

Author(s): Franci Bajd, Igor Serša
Published in: Biophysical Journal, Issue 114/11, 2018, Page(s) 2732-2742, ISSN 0006-3495
Publisher: Biophysical Society
DOI: 10.1016/j.bpj.2018.04.031

A New Network for the Advancement of Marine Biotechnology in Europe and Beyond

Author(s): Ana Rotter, Ariola Bacu, Michèle Barbier, Francesco Bertoni, Atle M. Bones, M. Leonor Cancela, Jens Carlsson, Maria F. Carvalho, Marta Cegłowska, Meltem Conk Dalay, Thanos Dailianis, Irem Deniz, Dragana Drakulovic, Arita Dubnika, Hjörleifur Einarsson, Ayşegül Erdoğan, Orhan Tufan Eroldoğan, David Ezra, Stefano Fazi, Richard J. FitzGerald, Laura M. Gargan, Susana P. Gaudêncio, Nadica Ivoše
Published in: Frontiers in Marine Science, Issue 7, 2020, ISSN 2296-7745
Publisher: Frontiers
DOI: 10.3389/fmars.2020.00278

Antimicrobial Efficiency and Surface Interactions of Quaternary Ammonium Compound Absorbed on Dielectric Barrier Discharge (DBD) Plasma Treated Fiber-Based Wiping Materials

Author(s): Xinyu Song, Uros Cvelbar, Petra Strazar, Lutz Vossebein, Andrea Zille
Published in: ACS Applied Materials & Interfaces, Issue 12/1, 2020, Page(s) 298-311, ISSN 1944-8244
Publisher: American Chemical Society
DOI: 10.1021/acsami.9b18746

Do bacteria occupying important ecological niches contribute to the entrance of mercury into the food webs?

Author(s): Tomaž Rijavec, Manca Kovač Viršek, Aleš Lapanje
Published in: Science of The Total Environment, Issue 671, 2019, Page(s) 1094-1100, ISSN 0048-9697
Publisher: Elsevier BV
DOI: 10.1016/j.scitotenv.2019.03.423

High time resolution and high signal-to-noise monitoring of the bacterial growth kinetics in the presence of plasmonic nanoparticles

Author(s): Marija Vukomanovic, Eduard Torrents
Published in: Journal of Nanobiotechnology, Issue 17/1, 2019, ISSN 1477-3155
Publisher: BioMed Central
DOI: 10.1186/s12951-019-0459-1

Effect of multi-modal environmental stress on dose-dependent cytotoxicity of nanodiamonds in Saccharomyces cerevisiae cells

Author(s): Karthika Prasad, Nina Recek, Renwu Zhou, Rusen Zhou, Morteza Aramesh, Annalena Wolff, Robert E. Speight, Miran Mozetič, Kateryna Bazaka, Kostya (Ken) Ostrikov
Published in: Sustainable Materials and Technologies, Issue 22, 2019, Page(s) e00123, ISSN 2214-9937
Publisher: Elsevier
DOI: 10.1016/j.susmat.2019.e00123

Microbial community dynamics in mesophilic and thermophilic batch reactors under methanogenic, phenyl acid-forming conditions

Author(s): Eva Maria Prem, Blaz Stres, Paul Illmer, Andreas Otto Wagner
Published in: Biotechnology for Biofuels, Issue 13/1, 2020, ISSN 1754-6834
Publisher: Springer Nature
DOI: 10.1186/s13068-020-01721-z

Photocatalytic biocidal effect of copper doped TiO2 nanotube coated surfaces under laminar flow, illuminated with UVA light on Legionella pneumophila

Author(s): Martina Oder, Tilen Koklič, Polona Umek, Rok Podlipec, Janez Štrancar, Martin Dobeic
Published in: PLOS ONE, Issue 15/1, 2020, Page(s) e0227574, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/journal.pone.0227574

Foliar surface free energy affects platinum nanoparticle adhesion, uptake, and translocation from leaves to roots in arugula and escarole

Author(s): Eva Kranjc, Darja Mazej, Marjana Regvar, Damjana Drobne, Maja Remškar
Published in: Environmental Science: Nano, Issue 5/2, 2018, Page(s) 520-532, ISSN 2051-8153
Publisher: Royal Society of Chemistry
DOI: 10.1039/c7en00887b

Biomechanochemical Solid-State Synthesis of Silver Nanoparticles with Antibacterial Activity Using Lichens

Author(s): Matej Baláž, Michal Goga, Michal Hegedüs, Nina Daneu, Mária Kováčová, L’udmila Tkáčiková, L’udmila Balážová, Martin Bačkor
Published in: ACS Sustainable Chemistry & Engineering, Issue 8/37, 2020, Page(s) 13945-13955, ISSN 2168-0485
Publisher: American Chemical Society
DOI: 10.1021/acssuschemeng.0c03211

Uptake, translocation and ligand of silver in Lactuca sativa exposed to silver nanoparticles of different size, coatings and concentration

Author(s): Laura Torrent, Mònica Iglesias, Eva Marguí, Manuela Hidalgo, Dolors Verdaguer, Laura Llorens, Alojz Kodre, Anja Kavčič, Katarina Vogel-Mikuš
Published in: Journal of Hazardous Materials, Issue 384, 2020, Page(s) 121201, ISSN 0304-3894
Publisher: Elsevier BV
DOI: 10.1016/j.jhazmat.2019.121201

Cutting edge development on graphene derivatives modified by liquid crystal and CdS/TiO 2 hybrid matrix: optoelectronics and biotechnological aspects

Author(s): Kaushik Pal, Asiya Si, Gharieb S. El-Sayyad, M. Abd Elkodous, Rajesh Kumar, Ahmed I. El-Batal, Samo Kralj, Sabu Thomas
Published in: Critical Reviews in Solid State and Materials Sciences, 2020, Page(s) 1-65, ISSN 1040-8436
Publisher: Taylor & Francis
DOI: 10.1080/10408436.2020.1805295

Investigation of the behaviour of zero-valent iron nanoparticles and their interactions with Cd2+ in wastewater by single particle ICP-MS

Author(s): Janja Vidmar, Primož Oprčkal, Radmila Milačič, Ana Mladenovič, Janez Ščančar
Published in: Science of The Total Environment, Issue 634, 2018, Page(s) 1259-1268, ISSN 0048-9697
Publisher: Elsevier BV
DOI: 10.1016/j.scitotenv.2018.04.081

Cold Plasma, a New Hope in the Field of Virus Inactivation

Author(s): Arijana Filipić, Ion Gutierrez-Aguirre, Gregor Primc, Miran Mozetič, David Dobnik
Published in: Trends in Biotechnology, Issue 38/11, 2020, Page(s) 1278-1291, ISSN 0167-7799
Publisher: Elsevier BV
DOI: 10.1016/j.tibtech.2020.04.003

Isolation, identification and selection of bacteria with the proof-of- concept for bioaugmentation of whitewater from woodfree paper mills “(project related publication after the start date of SurfBio project)”

Author(s): Verdel, Nada, Tomaž Rijavec, Iaroslav Rybkin, Anja Erzin, Žiga Velišček, Albin Pintar, Aleš Lapanje
Published in: Frontiers in microbiology, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.758702

Surface-enhanced Raman spectroscopy for chemical and biological sensing using nanoplasmonics: The relevance of interparticle spacing and surface morphology

Author(s): Vasyl Shvalya, Gregor Filipič, Janez Zavašnik, Ibrahim Abdulhalim, Uroš Cvelbar
Published in: Applied Physics Reviews, Issue 7/3, 2020, Page(s) 031307, ISSN 1931-9401
Publisher: AIP Publishing LLC
DOI: 10.1063/5.0015246

Strategies for Anisotropic Fibrillar Hydrogels: Design, Cell Alignment, and Applications in Tissue Engineering

Author(s): Anatolii Abalymov*, Bat-El Pinchasik, Roman A. Akasov, Maria Lomova, and Bogdan V. Parakhonskiy
Published in: Biomacromolecules, 2023, ISSN 1526-4602
Publisher: ACS
DOI: 10.1021/acs.biomac.3c00503

A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants

Author(s): Roberto B.M. Marano, Telma Fernandes, Célia M. Manaia, Olga Nunes, Donald Morrison, Thomas U. Berendonk, Norbert Kreuzinger, Tanel Tenson, Gianluca Corno, Despo Fatta-Kassinos, Christophe Merlin, Edward Topp, Edouard Jurkevitch, Leonie Henn, Andrew Scott, Stefanie Heß, Katarzyna Slipko, Mailis Laht, Veljo Kisand, Andrea Di Cesare, Popi Karaolia, Stella G. Michael, Alice L. Petre, Roberto Rosal,
Published in: Environment International, Issue 144, 2020, Page(s) 106035, ISSN 0160-4120
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.envint.2020.106035

Modelling the effects of multiple stressors on respiration and microbial biomass in the hyporheic zone using decision trees

Author(s): Nataša Mori, Barbara Debeljak, Mateja Škerjanec, Tatjana Simčič, Tjaša Kanduč, Anton Brancelj
Published in: Water Research, Issue 149, 2019, Page(s) 9-20, ISSN 0043-1354
Publisher: Elsevier BV
DOI: 10.1016/j.watres.2018.10.093

Critical Considerations on the Clinical Translation of Upconversion Nanoparticles (UCNPs): Recommendations from the European Upconversion Network (COST Action CM1403)

Author(s): Helena Oliveira, Artur Bednarkiewicz, Andreas Falk, Eleonore Fröhlich, Darja Lisjak, Adriele Prina‐Mello, Susanne Resch, Christa Schimpel, Ivana Vinković Vrček, Edyta Wysokińska, Hans H. Gorris
Published in: Advanced Healthcare Materials, 2018, Page(s) 1801233, ISSN 2192-2640
Publisher: John Wiley and Sons Ltd
DOI: 10.1002/adhm.201801233

Nanofibers with genotyped Bacillus strains exhibiting antibacterial and immunomodulatory activity “(SurfBio project related publication, RP2)”

Author(s): Grilc NK, Zidar A, Kocbek P, Rijavec T, Colja T, Lapanje A, Jeras M, Gobec M, Mlinarič-Raščan I, Gašperlin M, Kristl J., Zupančič Š.
Published in: Journal of Controlled Release, 2023, ISSN 0168-3659
Publisher: Elsevier BV
DOI: 10.1016/j.jconrel.2023.01.082

Utility of Galleria mellonella larvae for evaluating nanoparticle toxicology

Author(s): Laura Moya-Andérico, Marija Vukomanovic, Maria del Mar Cendra, Miriam Segura-Feliu, Vanessa Gil, José A. del Río, Eduard Torrents
Published in: Chemosphere, Issue 266, 2021, Page(s) 129235, ISSN 0045-6535
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.chemosphere.2020.129235

MOESM1 of High time resolution and high signal-to-noise monitoring of the bacterial growth kinetics in the presence of plasmonic nanoparticles

Author(s): Vukomanovic, Marija; Torrents, Eduard
Published in: Journal of Nanobiotechnology, Issue 18, 2019, ISSN 1477-3155
Publisher: BioMed Central
DOI: 10.6084/m9.figshare.7665041

Intracellular Activation of a Prostate Specific Antigen-Cleavable Doxorubicin Prodrug: A Key Feature Toward Prodrug-Nanomedicine Design

Author(s): Sara G. T. Pereira, Samo Hudoklin, Mateja Erdani Kreft, Nina Kostevsek, Marc C. A. Stuart, Wafa T. Al-Jamal
Published in: Molecular Pharmaceutics, Issue 16/4, 2019, Page(s) 1573-1585, ISSN 1543-8384
Publisher: American Chemical Society
DOI: 10.1021/acs.molpharmaceut.8b01257

Sulfur-Mediated Mechanochemical Synthesis of Spherical and Needle-Like Copper Sulfide Nanocrystals with Antibacterial Activity

Author(s): Zh. Shalabayev, M. Baláž, N. Daneu, E. Dutková, Z. Bujňáková, M. Kaňuchová, Z. Danková, Ĺ. Balážová, F. Urakaev, Ĺ. Tkáčiková, M. Burkitbayev
Published in: ACS Sustainable Chemistry & Engineering, Issue 7/15, 2019, Page(s) 12897-12909, ISSN 2168-0485
Publisher: American Chemical Society
DOI: 10.1021/acssuschemeng.9b01849

Hard, Soft, and Hard-and-Soft Drug Delivery Carriers Based on CaCO3 and Alginate Biomaterials: Synthesis, Properties, Pharmaceutical Applications “(SurfBio project related publication, RP2)”

Author(s): Huang, Yanqi, Lin Cao, Bogdan V. Parakhonskiy, and Andre G. Skirtach
Published in: Pharmaceutics, 2022, ISSN 1999-4923
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/pharmaceutics14050909

Surface modified titanium dioxide using transition metals: nickel as a winning transition metal for solar light photocatalysis

Author(s): Andraž Šuligoj, Iztok Arčon, Matjaž Mazaj, Goran Dražić, Denis Arčon, Pegie Cool, Urška Lavrenčič Štangar, Nataša Novak Tušar
Published in: Journal of Materials Chemistry A, Issue 6/21, 2018, Page(s) 9882-9892, ISSN 2050-7488
Publisher: Royal Society of Chemistry
DOI: 10.1039/c7ta07176k

Combined chemical genetics and data-driven bioinformatics approach identifies receptor tyrosine kinase inhibitors as host-directed antimicrobials

Author(s): Cornelis J. Korbee, Matthias T. Heemskerk, Dragi Kocev, Elisabeth van Strijen, Omid Rabiee, Kees L. M. C. Franken, Louis Wilson, Nigel D. L. Savage, Sašo Džeroski, Mariëlle C. Haks, Tom H. M. Ottenhoff
Published in: Nature Communications, Issue 9/1, 2018, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-017-02777-6

Environmentally and Industrially Friendly Recycling of Platinum Nanoparticles Through Electrochemical Dissolution-Electrodeposition in Acid-Free/Dilute Acidic Electrolytes

Author(s): Raghunandan Sharma, Sašo Gyergyek, Shuang Ma Andersen
Published in: ChemSusChem, Issue 11/21, 2018, Page(s) 3742-3750, ISSN 1864-5631
Publisher: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/cssc.201801604

Bifunctional (Zn,Fe)3O4 nanoparticles: Tuning their efficiency for potential application in reagentless glucose biosensors and magnetic hyperthermia

Author(s): Miloš Ognjanović, Dalibor M. Stanković, Yue Ming, Hongguo Zhang, Boštjan Jančar, Biljana Dojčinović, Željko Prijović, Bratislav Antić
Published in: Journal of Alloys and Compounds, Issue 777, 2019, Page(s) 454-462, ISSN 0925-8388
Publisher: Elsevier BV
DOI: 10.1016/j.jallcom.2018.10.369

"Radiolabeling of Micro-/Nanoplastics via In-Diffusion ""(SurfBio project related publication, RP2)"""

Author(s): A. Stricker, S. Hilpmann, A. Mansel, K. Franke, S. Schymura
Published in: Nanomaterials, 2023, ISSN 2079-4991
Publisher: MDPI
DOI: 10.3390/nano13192687

Natural Microbial Communities Can Be Manipulated by Artificially Constructed Biofilms

Author(s): Tomaž Rijavec, Jan Zrimec, Rob Spanning, Aleš Lapanje
Published in: Advanced Science, Issue 6/22, 2019, Page(s) 1901408, ISSN 2198-3844
Publisher: Wiley
DOI: 10.1002/advs.201901408

Electrochemical immunosensor functionalized with nanobodies for the detection of the toxic microalgae Alexandrium minutum using glassy carbon electrode modified with gold nanoparticles

Author(s): Sandra Oloketuyi, Elisa Mazzega, Janez Zavašnik, Kingkan Pungjunun, Kurt Kalcher, Ario de Marco, Eda Mehmeti
Published in: Biosensors and Bioelectronics, Issue 154, 2020, Page(s) 112052, ISSN 0956-5663
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.bios.2020.112052

Multi-level information fusion for learning a blood pressure predictive model using sensor data

Author(s): Monika Simjanoska, Stefan Kochev, Jovan Tanevski, Ana Madevska Bogdanova, Gregor Papa, Tome Eftimov
Published in: Information Fusion, Issue 58, 2020, Page(s) 24-39, ISSN 1566-2535
Publisher: Elsevier BV
DOI: 10.1016/j.inffus.2019.12.008

The influence of Ca/Mg ratio on autogelation of hydrogel biomaterials with bioceramic compounds

Author(s): Anatolii Abalymov; Ekaterina Lengert; Louis Van der Meeren; Mariia Saveleva; Anna Ivanova; Timothy E.L. Douglas; Andre G. Skirtach; Dmitry Volodkin; Bogdan Parakhonskiy
Published in: Biomaterial Advances, Issue 9, 2022, ISSN 2772-9508
Publisher: Elsevier
DOI: 10.1016/j.msec.2021.112632

DNA structure at the plasmid origin-of-transfer indicates its potential transfer range

Author(s): Jan Zrimec, Aleš Lapanje
Published in: Scientific Reports, Issue 8/1, 2018, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-018-20157-y

Metallic-mean quasicrystals as aperiodic approximants of periodic crystals

Author(s): Joichiro Nakakura, Primož Ziherl, Junichi Matsuzawa, Tomonari Dotera
Published in: Nature Communications, Issue 10/1, 2019, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-019-12147-z

A hierarchical Ru-bearing alumina/magnetic iron-oxide composite for the magnetically heated hydrogenation of furfural

Author(s): Sašo Gyergyek, Andraž Kocjan, Miha Grilc, Blaž Likozar, Brigita Hočevar, Darko Makovec
Published in: Green Chemistry, Issue 22/18, 2020, Page(s) 5978-5983, ISSN 1463-9262
Publisher: Royal Society of Chemistry
DOI: 10.1039/d0gc00966k

Self‐Assembly of an Amino Acid Derivative into an Antimicrobial Hydrogel Biomaterial

Author(s): Ana M. Garcia, Roy Lavendomme, Slavko Kralj, Marina Kurbasic, Ottavia Bellotto, Maria C. Cringoli, Sabrina Semeraro, Antonella Bandiera, Rita De Zorzi, Silvia Marchesan
Published in: Chemistry – A European Journal, Issue 26/8, 2019, Page(s) 1880-1886, ISSN 0947-6539
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/chem.201905681

Fewer Defects in the Surface Slows the Hydrolysis Rate, Decreases the ROS Generation Potential, and Improves the Non-ROS Antimicrobial Activity of MgO

Author(s): Nemanja Anicˇić, Marija Vukomanović, Tilen Koklicˇ, Danilo Suvorov
Published in: Small, Issue 14/26, 2018, Page(s) 1800205, ISSN 1613-6810
Publisher: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/smll.201800205

Low Toxicological Impact of Commercial Pristine Multi-Walled Carbon Nanotubes on the Yeast Saccharomyces cerevisiae.

Author(s): Sonia Martel Martin; Rocío Barros; Brixhilda Domi; Carlos Rumbo; Matteo Poddighe; Santiago Aparicio; Maria Suarez-Diez; Juan Antonio Tamayo-Ramos; Juan Antonio Tamayo-Ramos; Juan Antonio Tamayo-Ramos
Published in: Volume 11, Issue 21, 2021, ISSN 2079-4991
Publisher: MDPI
DOI: 10.3390/nano11092272

Decisive Role of Perimeter Sites in Silica-Supported Ag Nanoparticles in Selective Hydrogenation of CO 2 to Methyl Formate in the Presence of Methanol

Author(s): Juan José Corral-Pérez, Atul Bansode, C. S. Praveen, Anton Kokalj, Helena Reymond, Aleix Comas-Vives, Joost VandeVondele, Christophe Copéret, Philipp Rudolf von Rohr, Atsushi Urakawa
Published in: Journal of the American Chemical Society, Issue 140/42, 2018, Page(s) 13884-13891, ISSN 0002-7863
Publisher: American Chemical Society
DOI: 10.1021/jacs.8b08505

Sustained release of antimicrobials from double-layer nanofiber mats for local treatment of periodontal disease, evaluated using a new micro flow-through apparatus

Author(s): Špela Zupančič, Luca Casula, Tomaž Rijavec, Aleš Lapanje, Matevž Luštrik, Anna Maria Fadda, Petra Kocbek, Julijana Kristl
Published in: Journal of Controlled Release, Issue 316, 2019, Page(s) 223-235, ISSN 0168-3659
Publisher: Elsevier BV
DOI: 10.1016/j.jconrel.2019.10.008

Other (5)

Strain-dependent selective antimicrobial action of cationic polyelectrolytes on Gram-negative bacteria “(project related publication after the start date of SurfBio project)”

Author(s): Rybkin, Iaroslav, Janja Mirtic, Hana Majaron, Jitka Hrescak, Miran Ceh, Janez Strancar, Julijana Kristl, Tomaz Rijavec, Ales Lapanje
Published in: BioRxiv, 2021
Publisher: Cold Spring Harbor Labroatories
DOI: 10.1101/2021.08.31.458386

In vivo capture of bacterial cells by remote guiding “(project related publication after the start date of SurfBio project)”

Author(s): Rybkin, Iaroslav A., Sergey I. Pinyaev, Olga A. Sindeeva, Sergey V. German, Maja Koblar, Nikolay A. Pyataev, Miran Ceh, Dmitry A. Gorin, Gleb B. Sukhorukov, Ales Lapanje
Published in: BioRxiv, 2021
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2021.08.06.455395

MOOC on Horizon Europe: From proposal stage to project management “(SurfBio project related publication, RP2)”

Author(s): Gómez Cuadrado, Laura, Lapuente de Ojeda, Beatriz, Moreno, Raquel, Martel Martin, Sonia, Barros García, Rocío
Published in: 2023
Publisher: UDEMY
DOI: 10.5281/zenodo.10184713

MOOC on Wet and dry methods to study surface and colloid biology “(SurfBio project related publication, RP2)”

Author(s): Lapanje, Ales, Suarez Diez, Maria, Ali Khan, Aqib Hassan, Furlan, Cristina, Rijavec, Tomaz, Lapuente de Ojeda, Beatriz
Published in: 2023
Publisher: UDEMY
DOI: 10.5281/zenodo.10184691

"MOOC on ""Methods to develop and analyse microbial cell-surface and surface-colloid interaction"" “(SurfBio project related publication, RP2)”"

Author(s): Ales, Lapanje, Parakhonskiy, Bogdan, Fischer, Cornelius, Schymura, Stefan, Skirtach, Andre, Hilpmann, Stephan, Lapuente de Ojeda, Beatriz
Published in: 2023
Publisher: UDEMY
DOI: 10.5281/zenodo.10184707

Thesis and dissertations (2)

Optimisation of bacterial genomic DNA isolation for nanopore sequencing and sequence analysis of selected strains “(SurfBio project related publication, RP2)”

Author(s): Urša Lovše (Adviser: Aleš Lapanje, Coadviser: Marko Dolinar)
Published in: Master Thesis, 2023
Publisher: University of Ljubljana

Selection and characterization of bacteria for their use in biological white watertreatment of the wood-free paper mills

Author(s): Anja Erzin (Adviser: Igor Plazl, Coadviser: Aleš lapanje)
Published in: Master Thesis, 2022
Publisher: University of Ljubljana

Book chapters (1)

Microbiotechnology-based solutions for removal and valorization of waste in pulp and paper industry

Author(s): VERDEL, Nada, SEŽUN, Mija, RIJAVEC, Tomaž, ZUGAN, Maja, DEEV, Dmitrii, RYBKIN, Iaroslav, LAPANJE, Aleš
Published in: Biorefinery for water and wastewater treatment, 2023, ISBN 978-3-031-20822-5
Publisher: Springer Nature
DOI: 10.1007/978-3-031-20822-5_21

Non-peer reviewed articles (1)

Products of microbiological lignin degradation “(SurfBio project related publication, RP2)”

Author(s): Helena Plešnik, Maja Zugan, Jurij Trontelj, Aleš Lapanje, Tina Kosjek
Published in: Papir, 2022, ISSN 0350-6614
Publisher: DITP - Društvo inženirjev in tehnikov papirništva Slovenije GZS - Združenje papirne in papirno predelovalne industrije ICP - Inštitut za celulozo in papir

Monographic books (1)

SURFBIO Policy workshop - Book of abstracts “(SurfBio project related publication, RP2)”

Author(s): Aleš Lapanje; Beatriz Lapuente; Daniel Canas; Raquel Moreno; Tomaz Rijavec
Published in: 2023
Publisher: Jozef Stefan Institute
DOI: 10.5281/zenodo.8167835

Intellectual Property Rights

Patent (1)

A METHOD FOR MAKING SPATIALLY DEFINED AGGREGATES BY PRECISELY POSITIONING CELLS BASED ON ELECTROSTATIC INTERACTION

Application/Publication number: 20 217729
Date: 2020-12-29