Understanding (harmful) virus-host interactions by linking virology and bioinformatics

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Providing webpage, Twitter and YouTube about VIROINF

Providing webpage Twitter and YouTube about VIROINF

Publications

Antibiotic Exposure Leads to Reduced Phage Susceptibility in Vancomycin Intermediate Staphylococcus aureus (VISA)

Auteurs: Shawna McCallin; Carmen Menzi; Swenja Lassen; Jean Daraspe; Frank Oechslin; Philippe Moreillon
Publié dans: Antimicrobial Agents and Chemotherapy, Numéro Ahead of Print, 2022, ISSN 0066-4804
Éditeur: American Society for Microbiology
DOI: 10.1128/aac.02247-21

Quantitative measures of within-host viral genetic diversity

Auteurs: Lara Fuhrmann; Kim Philipp Jablonski; Niko Beerenwinkel
Publié dans: Current opinion in virology, Numéro 49, 2021, Page(s) 157-163, ISSN 1879-6257
Éditeur: Elsevier BV
DOI: 10.3929/ethz-b-000493904

Sequential disruption of SPLASH-identified vRNA–vRNA interactions challenges their role in influenza A virus genome packaging

Auteurs: Celia Jakob, Gabriel L. Lovate, Daniel Desir, Lara Gießler, Redmond P. Smyth, Roland Marquet, Kevin Lamkiewicz, Manja Marz, Martin Schwemmle, and Hardin Bolte
Publié dans: Nucleic Acids Research, Numéro 51 (12), 2023, Page(s) 6479–6494, ISSN 1362-4962
Éditeur: Oxford University Press
DOI: 10.1093/nar/gkad442

The influenza A virus genome packaging network — complex, flexible and yet unsolved.

Auteurs: Celia Jakob; Rithu Paul-Stansilaus,; Martin Schwemmle; Roland Marquet; Hardin Bolte.
Publié dans: Nucleic Acids Research, Numéro 03051048, 2022, Page(s) 9023-9038, ISSN 0305-1048
Éditeur: Oxford University Press
DOI: 10.1093/nar/gkac688

The International Virus Bioinformatics Meeting 2022

Auteurs: Franziska Hufsky; Denis Beslic; Dimitri Boeckaerts; Sebastian Duchene; Enrique González-Tortuero; Andreas J. Gruber; Jiarong Guo; Daan Jansen; John Juma; Kunaphas Kongkitimanon; Antoni Luque; Muriel Ritsch; Gabriel Lencioni Lovate; Luca Nishimura; Célia Pas; Esteban Domingo; Emma Hodcroft; Philippe Lemey; Matthew B. Sullivan; Friedemann Weber; Fernando González-Candelas; Sarah Krautwurst; Alba
Publié dans: Viruses, Numéro 19994915, 2022, Page(s) 973, ISSN 1999-4915
Éditeur: MDPI
DOI: 10.3390/v14050973

ITN—VIROINF: Understanding (Harmful) Virus-Host Interactions by Linking Virology and Bioinformatics

Auteurs: Winfried Goettsch; Niko Beerenwinkel; Li Deng; Lars Dölken; Bas E. Dutilh; Florian Erhard; Lars Kaderali; Max von Kleist; Roland Marquet; Jelle Matthijnssens; Shawna McCallin; Dino McMahon; Thomas Rattei; Ronald P. Van Rij; David L. Robertson; Martin Schwemmle; Noam Stern-Ginossar; Manja Marz
Publié dans: Viruses, Numéro 13(5), 2021, Page(s) 766, ISSN 1999-4915
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.17169/refubium-30621

grandR: a comprehensive package for nucleotide conversion sequencing data analysis

Auteurs: Teresa Rummel; Lygeri Sakellaridi; Florian Erhard
Publié dans: bioRxiv, 2022
Éditeur: Cold Spring Harbor Laboratory
DOI: 10.1101/2022.09.12.507665

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