Ultrafast Raman Technologies for Protein Identification and Sequencing

Informations projet

ProID

N° de convention de subvention: 964363

DOI

10.3030/964363

Projet clôturé

Date de signature de la CE 22 Janvier 2021

Date de début 1 Mai 2021

Date de fin 31 Octobre 2024

Financé au titre de

• EXCELLENT SCIENCE - Future and Emerging Technologies (FET)

Coût total

€ 2 988 513,75

Contribution de l’UE

€ 2 988 513,75

Coordonné par

FONDAZIONE ISTITUTO ITALIANO DI TECNOLOGIA
Italy

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Documents, reports (8)

Outreach & Engagement plan

Outreach Engagement plan

Continuous production of nanopores to support the other experiments
Report on optimized electrokinetic conditions for controlled translocations.

Report on optimized electrokinetic conditions for controlled translocations

Quality and management procedures, risk assessment

Quality and management procedures risk assessment

Experimental characterization of the SROE (first prototype)
Time resolved Raman spectra of selected peptides and data analyses with currently available nanopores and detectors
Report on in silico calculations compared with the experiments and explanation of the main physical mechanisms involved during the translocation
Quality and management procedures, risk assessment, update

Websites, patent fillings, videos etc. (1)

Project website and communication material

Demonstrators, pilots, prototypes (1)

Report on the final design and performances (SROE final prototype)

Publications

Peer reviewed articles (25)

New Horizons in Near-Zero Refractive Index Photonics and Hyperbolic Metamaterials

Auteurs: Michaël Lobet; Nathaniel Kinsey; Iñigo Liberal; Humeyra Caglayan; Paloma A. Huidobro; Emanuele Galiffi; Jorge Ricardo Mejía-Salazar; Giovanna Palermo; Zubin Jacob; Nicolò Maccaferri
Publié dans: Lobet , M , Kinsey , N , Liberal , I , Caglayan , H , Huidobro , P A , Galiffi , E , Mejía-Salazar , J R , Palermo , G , Jacob , Z & Maccaferri , N 2023 , ' New Horizons in Near-Zero Refractive Index Photonics and Hyperbolic Metamaterials ' , ACS Photonics , vol. 10 , no. 11 , pp. 3805-3820 . https://doi.org/10.1021/acsphotonics.3c00747, Numéro 10, 11, 2023, Page(s) 3805–3820, ISSN 2330-4022
Éditeur: American Chemical Society
DOI: 10.1021/acsphotonics.3c00747

Enhanced Optical Spectroscopy for Multiplexed DNA and Protein-Sequencing with Plasmonic Nanopores: Challenges and Prospects

Auteurs: Wang Li, Juan Zhou, Nicolò Maccaferri, Roman Krahne, Kang Wang*, and Denis Garoli*
Publié dans: Analytical Chemistry, Numéro 94, 2, 2022, Page(s) 503–514, ISSN 0003-2700
Éditeur: American Chemical Society
DOI: 10.1021/acs.analchem.1c04459

Plasmonic Bowl-Shaped Nanopore for Raman Detection of Single DNA Molecules in Flow-Through

Auteurs: Yingqi Zhao, Aliaksandr Hubarevich, Angela Federica De Fazio, Marzia Iarossi, Jian-An Huang, and Francesco De Angelis
Publié dans: Nano Letters, Numéro 23, 11, 2023, Page(s) 4830–4836, ISSN 1530-6984
Éditeur: American Chemical Society
DOI: 10.1021/acs.nanolett.3c00340

Single Photon Avalanche Diode Arrays for Time-Resolved Raman Spectroscopy

Auteurs: Francesca Madonini; Federica Villa
Publié dans: Sensors (Basel, Switzerland), Numéro Vol. 21, 2021, Page(s) 4287, ISSN 1424-8220
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/s21134287

Sub-picosecond collapse of molecular polaritons to pure molecular transition in plasmonic photoswitch-nanoantennas

Auteurs: Joel Kuttruff; Marco Romanelli; Esteban Pedrueza-Villalmanzo; Jonas Allerbeck; Jacopo Fregoni; Valeria Saavedra-Becerril; Joakim Andréasson; Daniele Brida; Alexandre Dmitriev; Stefano Corni; Nicolò Maccaferri
Publié dans: Nature Communications, Numéro Vol 14, Iss 1, Pp 1-10 (2023), 2023, Page(s) 3875, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-023-39413-5

Advances in ultrafast plasmonics

Auteurs: Alemayehu Nana Koya; Marco Romanelli; Joel Kuttruff; Nils Henriksson; Andrei Stefancu; Gustavo Grinblat; Aitor De Andres; Fritz Schnur; Mirko Vanzan; Margherita Marsili; Mahfujur Rahaman; Alba Viejo Rodríguez; Tlek Tapani; Haifeng Lin; Bereket Dalga Dana; Jingquan Lin; Grégory Barbillon; Remo Proietti Zaccaria; Daniele Brida; Deep Jariwala; László Veisz; Emiliano Cortés; Stefano Corni; Denis
Publié dans: Applied physics reviews 10 (2023). doi:10.1063/5.0134993, Numéro 10, 021318, 2023, ISSN 1931-9401
Éditeur: AIP Publishing LLC
DOI: 10.1063/5.0134993

Inverse design of molecule–metal nanoparticle systems interacting with light for desired photophysical properties

Auteurs: Takafumi Shiraogawa; Giulia Dall’Osto; Roberto Cammi; Masahiro Ehara; Stefano Corni
Publié dans: Physical Chemistry Chemical Physics, Numéro 24, 2022, Page(s) 22768-22777, ISSN 1463-9076
Éditeur: Royal Society of Chemistry
DOI: 10.1039/d2cp02870k

On Iterative Pre‐Compensation of 3D Laser‐Printed Micro‐Optical Components Using Confocal‐Optical Microscopy

Auteurs: Jannis Weinacker, Sebastian Kalt, Pascal Kiefer, Pascal Rietz, Martin Wegener
Publié dans: Advanced Functional Materials, Numéro 34, 2024, ISSN 1616-301X
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1002/adfm.202309356

Ultrafast Thermionic Electron Injection Effects on Exciton Formation Dynamics at a van der Waals Semiconductor/Metal Interface

Auteurs: Kilian R. Keller, Ricardo Rojas-Aedo, Huiqin Zhang, Pirmin Schweizer, Jonas Allerbeck, Daniele Brida, Deep Jariwala, and Nicolò Maccaferri*
Publié dans: ACS Photonics, Numéro 9, 8, 2022, Page(s) 2683–2690, ISSN 2330-4022
Éditeur: American Chemical Society
DOI: 10.1021/acsphotonics.2c00394

A generalized protein identification method for novel and diverse sequencing technologies

Auteurs: Bikash Kumar Bhandari, Nick Goldman
Publié dans: NAR Genomics and Bioinformatics, Numéro 6, 2024, ISSN 2631-9268
Éditeur: Oxford University Press
DOI: 10.1093/nargab/lqae126

Unraveling the electronic origin of a special feature in the triplet-minus-singlet spectra of carotenoids in natural photosystems

Auteurs: Agostino Migliore; Stefano Corni; Alessandro Agostini; Donatella Carbonera
Publié dans: Phys. Chem. Chem. Phys., Numéro 25, 2023, Page(s) 28998-29016, ISSN 1463-9084
Éditeur: Royal Society of Chemistry
DOI: 10.1039/d3cp03836j

Unraveling the Mechanism of Tip-Enhanced Molecular Energy Transfer

Auteurs: Coane, Colin; Romanelli, Marco; Dall'Osto, Giulia; Di Felice, Rosa; Corni, Stefano
Publié dans: Communications Chemistry, Numéro 32, 2024, ISSN 2399-3669
Éditeur: Stringer Nature
DOI: 10.48550/arxiv.2305.17265

Magnetoplasmonics in confined geometries: Current challenges and future opportunities

Auteurs: Nicolò Maccaferri; Alessio Gabbani; Francesco Pineider; Terunori Kaihara; Tlek Tapani; Paolo Vavassori
Publié dans: Applied Physics Letters, Numéro 122, 2023, Page(s) 120502, ISSN 0003-6951
Éditeur: American Institute of Physics
DOI: 10.1063/5.0136941

QM/Classical Modeling of Surface Enhanced Raman Scattering Based on Atomistic Electromagnetic Models

Auteurs: Piero Lafiosca, Luca Nicoli, Luca Bonatti, Tommaso Giovannini, Stefano Corni, Chiara Cappelli
Publié dans: Journal of Chemical Theory and Computation, Numéro 19, 2023, Page(s) 3616-3633, ISSN 1549-9618
Éditeur: American Chemical Society
DOI: 10.1021/acs.jctc.3c00177

The 2022 magneto-optics roadmap

Auteurs: Alexey Kimel, Anatoly Zvezdin, Sangeeta Sharma, Samuel Shallcross, Nuno de Sousa, Antonio García-Martín, Georgeta Salvan, Jaroslav Hamrle, Ondřej Stejskal, Jeffrey McCord, Silvia Tacchi, Giovanni Carlotti, Pietro Gambardella, Gian Salis, Markus Münzenberg, Martin Schultze, Vasily Temnov, Igor V Bychkov, Leonid N Kotov, Nicolò Maccaferri, Daria Ignatyeva, Vladimir Belotelov, Claire Donnelly, A
Publié dans: Journal of Physics D: Applied Physics, Numéro Volume 55, Number 46, 2022, Page(s) 463003, ISSN 0022-3727
Éditeur: Institute of Physics Publishing
DOI: 10.1088/1361-6463/ac8da0

Do We Really Need Quantum Mechanics to Describe Plasmonic Properties of Metal Nanostructures?

Auteurs: Giovannini, Tommaso; Bonatti, Luca; Lafiosca, Piero; Nicoli, Luca; Castagnola, Matteo; Grobas Illobre, Pablo; Corni, Stefano; Cappelli, Chiara
Publié dans: ACS Photonics, Numéro 23304022, 2022, Page(s) 3025–3034, ISSN 2330-4022
Éditeur: American Chemical Society
DOI: 10.1021/acsphotonics.2c00761

Label-Free Optical Analysis of Biomolecules in Solid-State Nanopores: Toward Single-Molecule Protein Sequencing

Auteurs: Yingqi Zhao; Marzia Iarossi; Angela Federica De Fazio; Jian-An Huang; Francesco De Angelis
Publié dans: ACS Photonics, Numéro 9, 3, 2022, Page(s) 730–742, ISSN 2330-4022
Éditeur: American Chemical Society
DOI: 10.1021/acsphotonics.1c01825

Magnetic control of particle trapping in a hybrid plasmonic nanopore

Auteurs: Nicolò Maccaferri, Paolo Vavassori, and Denis Garoli
Publié dans: Applied Physics Letters, Numéro 118, 2021, Page(s) 193102, ISSN 0003-6951
Éditeur: American Institute of Physics
DOI: 10.1063/5.0046245

Time-dependent surface-enhanced Raman scattering: A theoretical approach

Auteurs: Giulia Dall’Osto, Stefano Corni
Publié dans: The Journal of Chemical Physics, Numéro 161, 2024, ISSN 0021-9606
Éditeur: American Institute of Physics
DOI: 10.1063/5.0214564

Atomistic Simulations of Functionalized Nano-Materials for Biosensors Applications

Auteurs: Sutapa Dutta; Stefano Corni; Giorgia Brancolini
Publié dans: International Journal of Molecular Sciences, Numéro Vol. 23, 2022, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23031484

Magnetophotonics for sensing and magnetometry toward industrial applications

Auteurs: Conrad Rizal; Maria Grazia Manera; Daria O. Ignatyeva; Jorge R. Mejía-Salazar; Roberto Rella; Vladimir I. Belotelov; Francesco Pineider; Nicolò Maccaferri
Publié dans: Journal of Applied Physics, Numéro 130, 2021, Page(s) 230901, ISSN 0021-8979
Éditeur: American Institute of Physics
DOI: 10.1063/5.0072884

Real-Time Formulation of Atomistic Electromagnetic Models for Plasmonics

Auteurs: Piero Lafiosca, Luca Nicoli, Silvio Pipolo, Stefano Corni, Tommaso Giovannini, Chiara Cappelli
Publié dans: The Journal of Physical Chemistry C, Numéro 128, 2024, Page(s) 17513-17525, ISSN 1932-7447
Éditeur: American Chemical Society
DOI: 10.1021/acs.jpcc.4c04002

Plasmonic Photochemistry as a Tool to Prepare Metallic Nanopores with Controlled Diameter for Optimized Detection of Single Entities

Auteurs: Lanzavecchia, German; Kuttruff, Joel; Doricchi, Andrea; Douaki, Ali; Kumaranchira Ramankutty, Krishnadas; García, Isabel; Lin, Lyuye; Viejo Rodríguez, Alba; Wågberg, Thomas; Krahne, Roman; Maccaferri, Nicolò; Garoli, Denis
Publié dans: Advanced Optical Materials, Numéro 11, 16, 2023, Page(s) 2300786, ISSN 2195-1071
Éditeur: Wiley
DOI: 10.1002/adom.202300786

Magneto-Optical Activity in Nonmagnetic Hyperbolic Nanoparticles

Auteurs: Joel Kuttruff, Alessio Gabbani, Gaia Petrucci, Yingqi Zhao, Marzia Iarossi, Esteban Pedrueza-Villalmanzo, Alexandre Dmitriev, Antonietta Parracino, Giuseppe Strangi, Francesco De Angelis, Daniele Brida, Francesco Pineider, and Nicolò Maccaferri
Publié dans: PHYSICAL REVIEW LETTERS, Numéro 127, 2021, Page(s) 217402, ISSN 0031-9007
Éditeur: American Physical Society
DOI: 10.1103/physrevlett.127.217402

Role of Ionic Strength in the Formation of Stable Supramolecular Nanoparticle–Protein Conjugates for Biosensing

Auteurs: Giorgia Brancolini; Vincent Rotello; Stefano Corni
Publié dans: International Journal of Molecular Sciences, Numéro Vol. 23, 2022, Page(s) 2368, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23042368

Conference proceedings (4)

SPAD Sensors for Time-Gated Raman Spectroscopy

Auteurs: Francesca Madonini, Arianna Adelaide Maurina, and Federica Villa
Publié dans: Microscopy Histopathology and Analytics 2022, 2022, ISBN 978-1-957171-03-6
Éditeur: Optica Publishing Group
DOI: 10.1364/translational.2022.jm3a.13

Ultrafast Dynamics of Photochromic Molecules Coupled to Anisotropic Plasmon Nanoantennas

Auteurs: Joel Kuttruff, Marco Romanelli, Esteban Pedrueza-Villalmanzo, Jonas Allerbeck, Jacopo Fregoni, Valeria Saavedra-Becerril, Joakim Andreasson, Daniele Brida, Alexandre Dmitriev, Stefano Corni, and Nicolò Maccaferri
Publié dans: CLEO: QELS_Fundamental Science 2022, 2022, ISBN 978-1-957171-05-0
Éditeur: Optica Publishing Group
DOI: 10.1364/cleo_qels.2022.fm2a.2

Sub-ps Thermionic Charge Injection Effect on Exciton Formation Dynamics at Tungsten disulfide (WS2)/Metal Schottky Junction

Auteurs: R. Rojas-Aedo, K. R. Keller, H. Zhang, P. Schweizer, J. Allerbeck, D. Brida, D. Jariwala, and N. Maccaferri
Publié dans: CLEO: Applications and Technology 2022, 2022, ISBN 978-1-957171-05-0
Éditeur: Optica Publishing Group
DOI: 10.1364/cleo_at.2022.jtu3a.30

Control of particle trapping in solid-state nanopores with magnetic functionalities: an overview

Auteurs: Alemayehu Nana Koya, Joel Kuttruff, Tilaike Tapani, Alba Viejo Rodríguez, Sreyash Sarkar, Ornella Vaccarelli, Nicolò Maccaferri
Publié dans: Proceedings Volume 12131, Nanophotonics IX, 2022
Éditeur: SPIE
DOI: 10.1117/12.2622218