Project description
AI-driven advances in computational proteomics
Proteins influence everything from cell function to disease progression. While crucial for creating new therapies, the complexity of protein data poses a significant challenge. Supported by the Marie Skłodowska-Curie Actions programme, the ProtAIomics project brings together universities, hospitals, small and medium-sized enterprises, and industry leaders. Together, they will develop algorithms to extract valuable insights from mass spectrometry data. Specifically, the project aims to build models that decode protein functions. Additionally, ProtAIomics provides doctoral candidates with the skills to advance biomedical science and therapy innovation.
Objective
ProtAIomiProtAIomics is a European Innovative Doctoral Network aimed at training the next generation of computational proteomics researchers by integrating advanced artificial intelligence (AI) methods with proteomics.
Computational proteomics stands at the forefront of cutting-edge life science research, utilizing advanced data analysis and AI to decode the complex interplay of proteins in biological systems. Proteins, typically referred to as the workhorses of biological systems, are central to understanding cellular functions, disease mechanisms, the mode of action of drugs, and drug response. The network brings together 15 beneficiaries and 9 associated partners from diverse academic and non-academic sectors, including university hospitals, SMEs, and large companies, to tackle key challenges in the computational proteomics field.
The network focuses on three main research objectives: (RO1) developing AI-assisted algorithms to maximize the extraction of high-quality information from raw mass spectrometry (MS) data; (RO2) creating advanced tools to transform this data into deeper biological knowledge through AI-driven models; and (RO3) applying this knowledge to generate actionable insights, such as precision drugs and clinical biomarkers, with a focus on advancing therapeutic applications.
Through cross-disciplinary collaboration, ProtAIomics will bridge gaps in current proteomics research by enhancing data utilization, improving understanding of protein functions, and advancing AI tools for clinical applications. The network will provide comprehensive training, equipping doctoral candidates with exceptional AI application and development skills in an intersectoral, interdisciplinary and international setting, and improving their future employability. ProtAIomics is committed to fostering responsible research and innovation (RRI), ethics, effective science communication, proficient data management, and advance towards delivering solutions to societal challenges.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences computer and information sciences artificial intelligence
- natural sciences biological sciences biochemistry biomolecules proteins proteomics
- natural sciences chemical sciences analytical chemistry mass spectrometry
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Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
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HORIZON.1.2 - Marie Skłodowska-Curie Actions (MSCA)
MAIN PROGRAMME
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Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
HORIZON-TMA-MSCA-DN - HORIZON TMA MSCA Doctoral Networks
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Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
(opens in new window) HORIZON-MSCA-2024-DN-01
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Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.
08003 Barcelona
Spain
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Participants (14)
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80333 Muenchen
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69120 Heidelberg
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CB10 1SA SAFFRON WALDEN
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08028 Barcelona
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CB2 1TN CAMBRIDGE
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69117 Heidelberg
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2800 Kongens Lyngby
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08002 Barcelona
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75794 Paris
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55128 Mainz
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4600 Wels
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100 44 Stockholm
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33100 Tampere
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142 00 PRAHA 4
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Partners (9)
Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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8092 Zuerich
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Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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28359 Bremen
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Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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CB2 0AA CAMBRIDGE
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Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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85748 Garching b.München
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The organization defined itself as SME (small and medium-sized enterprise) at the time the Grant Agreement was signed.
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Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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4040 Linz
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Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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55122 Mainz
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Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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116 36 Praha 1
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Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
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31400 Toulouse
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The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.
Partner organisations contribute to the implementation of the action, but do not sign the Grant Agreement.
Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.
69117 Heidelberg
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The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.