Autonomous Computing Artificial Cells

Project Information

AMIGA

Grant agreement ID: 101000199

DOI

10.3030/101000199

EC signature date 17 December 2020

Start date 1 February 2022

End date 31 July 2027

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 999 497,00

EU contribution

€ 1 999 497,00

Coordinated by

TECHNISCHE UNIVERSITEIT EINDHOVEN
Netherlands

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (11)

A microfluidic optimal experimental design platform for forward design of cell-free genetic networks

Author(s): Bob van Sluijs, Roel J. M. Maas, Ardjan J. van der Linden, Tom F. A. de Greef, Wilhelm T. S. Huck
Published in: Nature Communications, Issue 13, 2022, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-022-31306-3

Engineering a Scalable and Orthogonal Platform for Synthetic Communication in Mammalian Cells

Author(s): Anna-Maria Makri Pistikou; Glenn A.O. Cremers; Bryan L. Nathalia; Bas W.A. Bögels; Bruno V. Eijkens; Anne de Dreu; Maarten T.H. Bezembinder; Oscar M.J.A. Stassen; Carlijn C.V. Bouten; Maarten Merkx; Roman Jerala; Tom F. A. de Greef
Published in: Nature Communications, Issue 1, 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1101/2023.01.18.524631

Noise Minimization in Cell-Free Gene Expression

Author(s): Mart W. Bartelds, Óscar García-Blay, Pieter G. A. Verhagen, Elise J. Wubbolts, Bob van Sluijs, Hans A. Heus, Tom F. A. de Greef, Wilhelm T. S. Huck, and Maike M. K. Hansen
Published in: ACS Synthetic Biology, 2023, ISSN 2161-5063
Publisher: American Chemical Society
DOI: 10.1021/acssynbio.3c00174

Orthogonal Light-Dependent Membrane Adhesion Induces Social Self-Sorting and Member-Specific DNA Communication in Synthetic Cell Communities

Author(s): Ali Heidari, Oya I Sentürk, Shuo Yang, Alex Joesaar, Pierangelo Gobbo, Stephen Mann, Tom FA de Greef, Seraphine V Wegner
Published in: Small, 2023, ISSN 1613-6810
Publisher: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/smll.202206474

Mechanism-based and data-driven modeling in cell-free synthetic biology

Author(s): Angelina Yurchenko, Gökçe Özkul, Natal A. W. van Riel, Jan C. M. van Hest, Tom F. A. de Greef
Published in: Chemical Communications, Issue 60, 2024, Page(s) 6466-6475, ISSN 1359-7345
Publisher: Royal Society of Chemistry
DOI: 10.1039/d4cc01289e

Protocellular CRISPR/Cas‐Based Diffusive Communication Using Transcriptional RNA Signaling

Author(s): Shuo Yang; Alex Joesaar; Bas W. A. Bögels; Stephen Mann; Tom F. A. de Greef
Published in: Angewandte Chemie. International Edition, 61, 1 - 9, Issue 1, 2022, Page(s) 1-9, ISSN 1433-7851
Publisher: John Wiley & Sons Ltd.
DOI: 10.1002/ange.202202436

DNA Input Classification by a Riboregulator-Based Cell-Free Perceptron

Author(s): Ardjan J. van der Linden, Pascal A. Pieters, Mart W. Bartelds, Bryan L. Nathalia, Peng Yin, Wilhelm T. S. Huck, Jongmin Kim, Tom F. A. de Greef
Published in: ACS Synthetic Biology, Issue 11, 2023, Page(s) 1510-1520, ISSN 2161-5063
Publisher: American Chemical Society
DOI: 10.1021/acssynbio.1c00596

Bilayer Microfluidic Device for Combinatorial Plug Production

Author(s): Maaruthy Yelleswarapu, Sofia Spinthaki, Tom F. A. de Greef, Federica Eduati
Published in: Journal of Visualized Experiments, 2024, ISSN 1940-087X
Publisher: MYJoVE Corporation
DOI: 10.3791/66154

DNA Reaction System That Acquires Classical Conditioning

Author(s): Takashi Nakakuki, Masato Toyonari, Kaori Aso, Keiji Murayama, Hiroyuki Asanuma, Tom F. A. de Greef
Published in: ACS Synthetic Biology, Issue 13, 2024, Page(s) 521-529, ISSN 2161-5063
Publisher: American Chemical Society
DOI: 10.1021/acssynbio.3c00459

A Synthetic Protocell‐Based Heparin Scavenger

Author(s): Qing Liu, Shuo Yang, Iris Seitz, Anna‐Maria Makri Pistikou, Tom F. A. de Greef, Mauri A. Kostiainen
Published in: Small, Issue 19, 2023, ISSN 1613-6810
Publisher: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/smll.202201790

DNA storage in thermoresponsive microcapsules for repeated random multiplexed data access

Author(s): Bas W. A. Bögels, Bichlien H. Nguyen, David Ward, Levena Gascoigne, David P. Schrijver, Anna-Maria Makri Pistikou, Alex Joesaar, Shuo Yang, Ilja K. Voets, Willem J. M. Mulder, Andrew Phillips, Stephen Mann, Georg Seelig, Karin Strauss, Yuan-Jyue Chen & Tom F. A. de Greef
Published in: Nature Nanotechnology, 2023, ISSN 1748-3387
Publisher: Nature Publishing Group
DOI: 10.1038/s41565-023-01377-4