Harnessing the value of tomato genetic resources for now and the future

Project Information

HARNESSTOM

Grant agreement ID: 101000716

DOI

10.3030/101000716

Project closed

EC signature date 11 September 2020

Start date 1 October 2020

End date 31 December 2024

Funded under

• SOCIETAL CHALLENGES - Food security, sustainable agriculture and forestry, marine, maritime and inland water research, and the bioeconomy

Total cost

€ 8 075 196,25

EU contribution

€ 7 048 236,25

Coordinated by

AGENCIA ESTATAL CONSEJO SUPERIOR DE INVESTIGACIONES CIENTIFICAS
Spain

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Documents, reports (15)

Observatory of the current legislation
Population source improved in frequency of favourable alleles for fruit quality
Specific surveys developed for constructing the ideotypes based on agronomic and quality traits
Molecular markers for fruit firmness/shelf-life and antioxidant content
Report on sensory traits stability in different conditions and backgrounds
Avr-markers for detecting functional Cf genes

Avrmarkers for detecting functional Cf genes

"Training School on Browsing GenRes ""finding my ideal tomato""."

Training School on Browsing GenRes finding my ideal tomato

Second Advanced Training School.

Second Advanced Training School

Standardised operational Protocols for fruit quality assessment
Project's impact and identification of main processes and products obtained in the project

Projects impact and identification of main processes and products obtained in the project

Initial state of the art in legislation
Final Report Legal New Section

Final Report Legal News Section

First Advanced Training School
Farmer and Citizen Science training courses and seminars on participatory plant breeding
Participatory plant breeding kit and sensory kit

D83Participatory plant breeding kit and sensory kit

Websites, patent fillings, videos etc. (4)

Final set of Audiovisual materials

Audiovisual material cocrresponding to the latest progress of the project

External Project Website

D21 External Project Website

Initial set of Audiovisual materials

Audiovisual materials corresponding to the initial phase of the project

Mid Term set of Audiovisual materials

Audiovisual materials covering progress of the project during the first 36m

Demonstrators, pilots, prototypes (2)

Pre-breeds with combined Ty-genes for resistance to ToLCNDV
Exposition of HARNESSTOM varieties

Other (1)

Project Factsheets

Open Research Data Pilot (1)

ORDP: Open Research Data Pilot

Strategy for making availabled all results obtained in the project that will eventually be published

Publications

Peer reviewed articles (32)

European traditional tomatoes galore: a result of farmers' selection of a few diversity-rich loci

Author(s): Jose Blanca, Clara Pons, Javier Montero-Pau, David Sanchez-Matarredona, Peio Ziarsolo, Lilian Fontanet, Josef Fisher, Mariola Plazas, Joan Casals, Jose Luis Rambla, Alessandro Riccini, Samuela Pombarella, Alessandra Ruggiero, Maria Sulli, Stephania Grillo, Angelos Kanellis, Giovanni Giuliano, Richard Finkers, Maria Cammareri, Silvana Grandillo, Andrea Mazzucato, Mathilde Causse, Maria José Díez,
Published in: J Exp Bot, Issue Mar 31, 2022, ISSN 0022-0957
Publisher: Oxford University Press
DOI: 10.1093/jxb/erac072

Genetic control of tomato fruit quality: from QTL mapping to Genome WideAssociation studies and breeding

Author(s): Causse M., J Bénéjam, E Bineau, F Bitton, M Brault, Y Carretero, H Desaint, A Hereil, K Pellegrino, EPelpoir and J Zhao
Published in: Comptes Rendues Biologies, 2022, ISSN 1631-0691
Publisher: Elsevier Masson
DOI: 10.5802/crbiol.99

Genetic Control of Reproductive Traits underDifferent TemperatureRegimes in Inbred Line PopulationsDerived fromCrosses betweenS. pimpinellifoliumand S. lycopersicumAccessions

Author(s): Maria Jose Gonzalo , Luciano Carlos da Maia , Inmaculada Nájera , Carlos Baixauli , Giovanni Giuliano , Paola Ferrante , Antonio Granell , Maria Jose Asins and Antonio Jose Monforte
Published in: Plants, Issue 2022, 2022, Page(s) 1069, ISSN 2223-7747
Publisher: MDPI
DOI: 10.3390/plants11081069

The auxin-responsive transcription factor SlDOF9 regulates inflorescence and flower development in tomato

Author(s): Guojian Hu, Keke Wang, Baowen Huang, Isabelle Mila, Pierre Frasse, Elie Maza, Anis Djari, Michel Hernould, Mohamed Zouine, Zhengguo Li & Mondher Bouzayen
Published in: Nature Plants, 2022, ISSN 2055-0278
Publisher: Nature group
DOI: 10.1038/s41477-022-01121-1

European fresh-market tomato sensory ideotypes based on consumer preferences

Author(s): Joan Casals, Roser Romero del Castillo, Clara Pons, Andrea Mazzucato, Ivanka Tringovska, Gancho Pasev, Amalia Barone, Salvador Soler, Ludovica Fumelli, Stanislava Grozeva, Daniela Ganeva, Jaime Prohens, Maria José Díez, Antonio Granell
Published in: Scientia Horticulturae, Issue 335, 2025, Page(s) 113351, ISSN 0304-4238
Publisher: Elsevier BV
DOI: 10.1016/j.scienta.2024.113351

Interaction of two MADS-box genes leads to growth phenotype divergence of all-flesh type of tomatoes

Author(s): Baowen Huang, Guojian Hu, Keke Wang, Pierre Frasse, Elie Maza, Anis Djari, Wei Deng, Julien Pirrello, Vincent Burlat, Clara Pons, Antonio Granell, Zhengguo Li, Benoît van der Rest, Mondher Bouzayen
Published in: Nature Communications, Issue 12/1, 2021, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-27117-7

Inheritance of Secondary Metabolites and Gene Expression Related to Tomato Fruit Quality

Author(s): Estelle Bineau, José Luis Rambla, Renaud Duboscq, Marie-Noëlle Corre, Frédérique Bitton, Raphaël Lugan, Antonio Granell, Clémence Plissonneau, Mathilde Causse
Published in: International Journal of Molecular Sciences, Issue 23, 2025, Page(s) 6163, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23116163

Multilevel evolution shapes the function of NB-LRR encoding genes in plant innate immunity.

Author(s): Ercolano MR, D'Esposito D, Andolfo G, Frusciante L
Published in: Frontiers in Plant Science, 2022, ISSN 1664-462X
Publisher: Frontiers Media S. A.
DOI: 10.3389/fpls.2022

Pigment-Related Mutations Greatly Affect Berry Metabolome in San Marzano Tomatoes

Author(s): Gabriella Dono, José Luis Rambla, Sarah Frusciante, Eleonora Fabene, Aurelio Gómez-Cadenas, Antonio Granell, Gianfranco Diretto, Andrea Mazzucato
Published in: Horticulturae, Issue 8, 2025, Page(s) 120, ISSN 2311-7524
Publisher: MDPI
DOI: 10.3390/horticulturae8020120

Scientometric and Methodological Analysis of the Recent Literature on the Health-Related Effects of Tomato and Tomato Products

Author(s): Francesca Tilesi, Andrea Lombardi, Andrea Mazzucato
Published in: Foods, Issue 10/8, 2021, Page(s) 1905, ISSN 2304-8158
Publisher: Mdpi
DOI: 10.3390/foods10081905

Transcription factor SlBEL2 interferes with GOLDEN2-LIKEand influences green shoulder formation in tomato fruits

Author(s): Niu XL, Li HL, Li R, Liu GS, Peng ZZ, Jia W, Ji X, Zhu HL, Zhu BZ, Grierson D, Giuliano G, Luo YB, Fu DQ
Published in: The plant Journal, 2022, ISSN 1365-313X
Publisher: Wiley
DOI: 10.1111/tpj.15989

Tomato genomic prediction for good performance under high-temperature and identification of loci involved in thermotolerance response

Author(s): Elisa Cappetta, Giuseppe Andolfo, Anna Guadagno, Antonio Di Matteo, Amalia Barone, Luigi Frusciante, Maria Raffaella Ercolano
Published in: Horticulture Research, Issue 8, 2024, ISSN 2662-6810
Publisher: Oxfor University Press
DOI: 10.1038/s41438-021-00647-3

Genetic Analysis of Root-to-Shoot Signaling and Rootstock-Mediated Tolerance to Water Deficit in Tomato

Author(s): Maria J. Asins, Alfonso Albacete, Cristina Martínez-Andújar, Eser Celiktopuz, İlknur Solmaz, Nebahat Sarı, Francisco Pérez-Alfocea, Ian C. Dodd, Emilio A. Carbonell, Sevilay Topcu
Published in: Genes, Issue 12/1, 2021, Page(s) 10, ISSN 2073-4425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes12010010

Phenotypic and Genotypic Diversity of the Tomato Germplasm from the Lazio Region in Central Italy, with a Focus on Landrace Distinctiveness

Author(s): Farinon B, Picarella ME, Siligato F, Rea R, Taviani P., Mazzucato A
Published in: Frontiers in plant Sciences, 2022, ISSN 1664-462X
Publisher: Frontiers Media S. A.
DOI: 10.3389/fpls.2022.931233

Tomato transcriptomic response to Tuta absoluta infestation

Author(s): Daniela D’Esposito, Daniele Manzo, Alessandro Ricciardi, Antonio Pietro Garonna, Antonino De Natale, Luigi Frusciante, Francesco Pennacchio, Maria Raffaella Ercolano
Published in: BMC Plant Biology, Issue 21/1, 2021, ISSN 1471-2229
Publisher: BioMed Central
DOI: 10.1186/s12870-021-03129-9

Accelerating Tomato Breeding by Exploiting Genomic Selection Approaches

Author(s): Elisa Cappetta, Giuseppe Andolfo, Antonio Di Matteo, Amalia Barone, Luigi Frusciante, Maria Raffaella Ercolano
Published in: Plants, Issue 9/9, 2020, Page(s) 1236, ISSN 2223-7747
Publisher: MDPI
DOI: 10.3390/plants9091236

PRGdb 4.0: an updated database dedicated to genes involved in plant disease resistance process

Author(s): Calle García J, Guadagno A, Paytuvi-Gallart A, Saera-Vila A, Amoroso CG, D'Esposito D, Andolfo G, Aiese Cigliano R, Sanseverino W, Ercolano MR
Published in: Nucleic Acids Re, 2023, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkab1087

Epistatic QTLs for yield heterosis in tomato

Author(s): Shai Torgeman and Dani Zamir
Published in: PNAS, 2023, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2205787119

Meta-QTL and Candidate Gene Analyses of Agronomic Salt Tolerance and Related Traits in an RIL Population Derived from Solanum pimpinellifolium

Author(s): Maria J. Asins and Emilio A. Carbonell
Published in: Int. J. Mol. Sci., Issue 25, 2024, Page(s) 6055, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms25116055

Accelerating Tomato Breeding by Exploiting Genomic Selection Approaches

Author(s): Elisa Cappetta, Giuseppe Andolfo, Antonio Di Matteo, Amalia Barone, Luigi Frusciante, Maria Raffaella Ercolano
Published in: Plants, Issue 9, 2024, Page(s) 1236, ISSN 2223-7747
Publisher: MDPI
DOI: 10.3390/plants9091236

A novel tomato interspecific (<i>Solanum lycopersicum</i> var. <i>cerasiforme</i> and <i>Solanum pimpinellifolium</i>) MAGIC population facilitates trait association and candidate gene discovery in untapped exotic germplasm

Author(s): Andrea Arrones, Oussama Antar, Leandro Pereira-Dias, Andrea Solana, Paola Ferrante, Giuseppe Aprea, Mariola Plazas, Jaime Prohens, María José Díez, Giovanni Giuliano, Pietro Gramazio, Santiago Vilanova
Published in: Horticulture Research, Issue 11, 2024, ISSN 2052-7276
Publisher: Oxford Academic
DOI: 10.1093/hr/uhae154

Sequential breakdown of the Cf-9 leaf mould resistance locus in tomato by Fulvia fulva

Author(s): Silvia de la Rosa, Christiaan R. Schol, Ángeles Ramos Peregrina, David J. Winter, Anne M. Hilgers, Kazuya Maeda, Yuichiro Iida, Mariana Tarallo, Ruifang Jia, Henriek G. Beenen, Mercedes Rocafort, Pierre J. G. M. de Wit, Joanna K. Bowen, Rosie E. Bradshaw, Matthieu H. A. J. Joosten, Yuling Bai, Carl H. Mesarich6
Published in: New Phytologist, 2024, ISSN 1469-8137
Publisher: Wiley
DOI: 10.1111/nph.19925

RNA virus-mediated gene editing for tomato trait breeding

Author(s): Mireia Uranga, Verónica Aragonés, Arcadio García, Sophie Mirabel, Silvia Gianoglio, Silvia Presa, Antonio Granell, Fabio Pasin, José-Antonio Daròs
Published in: Horticulture Research, Issue 11, 2024, ISSN 2052-7276
Publisher: Oxford Academic
DOI: 10.1093/hr/uhad279

Tissue-specific resistance and susceptibility to the tomato brown rugose fruit virus (ToBRFV) conferred by Solanum pennellii loci

Author(s): Edan Rochsar, Shai Torgeman, Kfir Bandel, Amnon Koren, Chen Klap, Aviv Dombrovsky, Dani Zamir
Published in: BMC Plant Biology, Issue 25, 2025, ISSN 1471-2229
Publisher: BioMed Central
DOI: 10.1186/s12870-024-05989-3

In-depth characterization of greenflesh tomato mutants obtained by CRISPR/Cas9 editing: a case study with implications for breeding and regulation

Author(s): Gianoglio S, Comino C, Moglia A, Acquadro A, García-Carpintero V, Diretto G, Sevi F, Rambla JL, Dono G, Valentino D, Moreno-Giménez E, Fullana-Pericàs M, Conesa MÀ, Galmès J, Lanteri S, Mazzucato A, Orzáez D, Granell A
Published in: Forntiers in Plant Science, 2022, ISSN 1664-462X
Publisher: Frontiers Media S. A.
DOI: 10.3389/fpls.2022.936089

Breeding Tomato Hybrids for Flavour: Comparison of GWAS Results Obtained on Lines and F1 Hybrids

Author(s): Estelle Bineau, José Luis Rambla, Santiago Priego-Cubero, Alexandre Hereil, Frédérique Bitton, Clémence Plissonneau, Antonio Granell, Mathilde Causse
Published in: Genes, Issue 12/9, 2021, Page(s) 1443, ISSN 2073-4425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes12091443

Transcription factor SlBEL2 interferes with GOLDEN2-LIKE and influences green shoulder formation in tomato fruits

Author(s): Niu XL, Li HL, Li R, Liu GS, Peng ZZ, Jia W, Ji X, Zhu HL, Zhu BZ, Grierson D, Giuliano G, Luo YB, Fu DQ
Published in: The Plant Journal, 2022, ISSN 1365-313X
Publisher: Wiley
DOI: 10.1111/tpj.15989

Atlas of phenotypic, genotypic and geographical diversity present in the European traditional tomato

Author(s): Pons, C.; Casals, J.; Palombieri, L.; Riccini, A.; Rambla, J.L.; Ruggiero, A.; Figàs, M.R.; Plazas, M.; Koukounaras, A.; Picarella, M.E.; Sulli, M.; Fisher, J.; Ziarsolo, P.; Blanca, J.; Cañizares, J.; Cammareri, M.; Vitiello, A.; Batelli, G.; Kanellis, A.; Brouwer, M.; Finkers, R.; Nikoloudis, K.; Soler, S.; Giuliano, G.; Grillo, S.; Grandillo, S.; Zamir, D.; Mazzucato, A.; Causse, M.; Díez, M
Published in: Horticultural Research, 2022, ISSN 2662-6810
Publisher: Oxford Academic
DOI: 10.1093/hr/uhac112

Identification of tomato accessions as source of new genes for improving heat tolerance: from controlled experiments to field

Author(s): María José Gonzalo, Inmaculada Nájera, Carlos Baixauli, David Gil, Teresa Montoro, Vicky Soriano, Fabrizio Olivieri, Maria Manuela Rigano, Daniela Ganeva, Stanislava Grozeva-Tileva, Galina Pevicharova, Amalia Barone, Antonio Granell, Antonio José Monforte
Published in: BMC Plant Biology, Issue 21/1, 2021, ISSN 1471-2229
Publisher: BioMed Central
DOI: 10.1186/s12870-021-03104-4

Integration of QTL and transcriptome approaches for the identification of genes involved intomato response to nitrogen deficiency

Author(s): H. Desaint, A. Héreil, J. Belinchon-Moreno, Y. Carretero, E. Pelpoir, M. Pascal, M Brault, D. Dumont, F.Lecompte, P. Laugier, R. Duboscq, F. Bitton, M. Grumic, C. Giraud, P. Ferrante, G Giuliano, F. Sunseri, M.Causse 2023
Published in: BioRxiv, 2023, ISSN 2692-8205
Publisher: BioRxiv
DOI: 10.1101/2023.10.26.564109

HKT1;1 and HKT1;2 Na+ Transporters from Solanum galapagense Play Different Roles in the Plant Na+ Distribution under Salinity

Author(s): Asins, M.J.; Romero-Aranda, M.R.; Espinosa, J.; González-Fernández, P.; Jaime-Fernández, E.; Traverso, J.A.; Carbonell, E.A.; Belver, A
Published in: Int. J. Mol. Sci., Issue 23(9), 2022, Page(s) 5130, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23095130

The Tomato Interspecific NB-LRR Gene Arsenal and Its Impact on Breeding Strategies

Author(s): Giuseppe Andolfo, Nunzio D’Agostino, Luigi Frusciante, Maria Raffaella Ercolano
Published in: Genes, Issue 12/2, 2021, Page(s) 184, ISSN 2073-4425
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/genes12020184