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Structural and functional studies of human PNPase in mitochondrial RNA metabolism

Project description

Insight into key mitochondrial enzymes

Polynucleotide phosphorylase (PNPase) is an evolutionary conserved enzyme with a key role in RNA degradation and homeostasis. Recent evidence on the bacterial homologue shows that PNPase may also serve as a chaperone for regulatory RNA molecules. The aim of the EU-funded MitoPNP project is to study the functions and biological role of the human PNPase. Given that the enzyme localises in the intermembrane space of mitochondria, researchers speculate that it may be involved in mitochondrial RNA transport. Results will provide fundamental knowledge on mitochondrial biology and help understand the aetiology of PNPase-related disorders.

Objective

Throughout the eukaryotic lineages, mitochondria are essential organelles that provide cellular metabolic power through oxidative phosphorylation. In the mitochondrial intermembrane space resides an exoribonuclease highly conserved in the course of evolution: PNPase. Although the activity of this enzyme has been extensively studied, its function in this compartment is poorly understood. A clue to one of its potential functions has been provided by my recent findings on the bacterial PNPase, which I discovered to switch activity from an RNA degradation mode to a stabilising mode that chaperones regulatory RNAs. As the human and bacterial enzymes are homologues, it is possible that human PNPase (hPNPase) could have a dual mode of action as well, and could participate in regulatory processes or RNA cargo transport once trapped in a non-degradative assembly.
My research will address what functions are played by hPNPase present in the intermembrane space of the human mitochondria. I will characterise the full-length enzyme and its capacity to bind substrates in the degradative and non-degradative modes. In order to achieve these objectives, I will elucidate the structure-function relationship of hPNPase by cryo-electron microscopy complemented with biochemical and biophysical assays. The results will illuminate the biological roles of PNPase in human cells including its potential contributions to mitochondrial RNA trafficking. This interdisciplinary project with potential applications in human health will apply recent breakthrough advancements in cryo-EM in order to investigate the molecular basis of an intricate biological system to advance the understanding of mitochondria biology. The research effort will foster the career development of a talented researcher and contribute to the academic and research excellence in Poland by strengthening the expertise in cryo-EM, a method currently revolutionising structural biology, at the University of Warsaw.

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MSCA-IF - Marie Skłodowska-Curie Individual Fellowships (IF)

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(opens in new window) H2020-WF-2018-2020

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Coordinator

UNIWERSYTET WARSZAWSKI
Net EU contribution

Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.

€ 149 625,60
Address
KRAKOWSKIE PRZEDMIESCIE 26/28
00-927 WARSZAWA
Poland

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Activity type
Higher or Secondary Education Establishments
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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

€ 149 625,60
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