AI powered Data Curation & Publishing Virtual Assistant

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Communication Toolkit
Report from user survey with personas canva
Description of use cases
Update of Report on dissemination and communication activities 1
Definition on data quality & performance metrics
Report on dissemination and communication activities
Update of Business requirements (D1.3) for G2

Update of Business requirements (D1.3) for G2

Business requirements for R1

Business requirements for G!

Update of Report (D1.2) from user survey with personas canvas
Definition of assessment study including test scenarios & metrics, and study initiation package

Report 2 from external Ethics Advisory Board

Report 1 from external Ethics Advisory Board (including names and CVs of member)
Information governance framework and instruments
Regulatory conformance analysis of the AI development pipeline
Data Management Plan

Update to Annotation guidelines, tools & training
Annotation guidelines, tools & training
G1 of the AIDAVA prototype
Solution Design Document for G1
Global Data Sharing Standard
VA architecture (Application and Technical)
Update of Solution Design Document (D2.3) for G2

Audio-visual material
Public project website

Publications

Improving Patient Engagement in Phase 2 Clinical Trials With a Trial-Specific Patient Decision Aid: Development and Usability Study

Author(s): Iva Halilaj, Relinde Lieverse, Cary Oberije, Lizza Hendriks, Charlotte Billiet, Ines Joye, Brice Van Eeckhout, Anke Wind, Anshu Ankolekar, Philippe Lambin
Published in: Journal of Medical Internet Research, Issue 27, 2025, ISSN 1438-8871
Publisher: JMIR Publications Inc.
DOI: 10.2196/71817

Radiomics Quality Score 2.0: towards radiomics readiness levels and clinical translation for personalized medicine

Author(s): Philippe Lambin, Henry C. Woodruff, Shruti Atul Mali, Xian Zhong, Sheng Kuang, Elizaveta Lavrova, Hamza Khan, Karim Lekadir, Alex Zwanenburg, Joseph Deasy, Maciej Bobowicz, Luis Marti-Bonmati, Andrew Maidment, Michel Dumontier, Paul E. Kinahan, J. Martijn Nobel, Sina Amirrajab, Zohaib Salahuddin
Published in: Nature Reviews Clinical Oncology, Issue 22, 2025, ISSN 1759-4774
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41571-025-01067-1

AI for life: Trends in artificial intelligence for biotechnology

Author(s): Andreas Holzinger, Katharina Keiblinger, Petr Holub, Kurt Zatloukal, Heimo Müller
Published in: New Biotechnology, Issue 74, 2023, ISSN 1871-6784
Publisher: Elsevier BV
DOI: 10.1016/J.NBT.2023.02.001

AI for life: Trends in artificial intelligence for biotechnology

Author(s): Holzinger A, Keiblinger K, Holub P, Zatloukal K, Müller H.
Published in: New Biotechnology, 2023, ISSN 1871-6784
Publisher: Elsevier
DOI: 10.1016/J.NBT.2023.02.001

Artificial intelligence based data curation: enabling a patient-centric European health data space

Author(s): Isabelle de Zegher; Kerli Norak; Kerli Norak; Dominik Steiger; Heimo Müller; Dipak Kalra; Bart Scheenstra; Isabella Cina; Stefan Schulz; Stefan Schulz; Kanimozhi Uma; Petros Kalendralis; Eno-Martin Lotman; Martin Benedikt; Michel Dumontier; Remzi Celebi
Published in: Frontiers in Medicine, 2024, ISSN 2296-858X
Publisher: Frontiers Media SA
DOI: 10.3389/FMED.2024.1365501

Reply to ‘Radiomics Quality Score 2.0: what changed from version 1.0 and why it matters’

Author(s): Philippe Lambin, Zohaib Salahuddin
Published in: Nature Reviews Clinical Oncology, Issue 23, 2025, ISSN 1759-4774
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41571-025-01096-W

Toward human-level concept learning: Pattern benchmarking for AI algorithms

Author(s): Holzinger A, Saranti A, Angerschmid A, Finzel B, Schmid U, Mueller H
Published in: Patterns, 2023, ISSN 2666-3899
Publisher: Cell Press Elsevier Inc.
DOI: 10.1016/j.patter.2023.100788

SynthMedic: Utilizing large language models for synthetic discharge summary generation, correction and validation

Author(s): Georgi Grazhdanski, Vasil Vasilev, Sylvia Vassileva, Dimitar Taskov, Izabel Antova, Ivan Koychev, Svetla Boytcheva
Published in: Journal of Biomedical Informatics, Issue 170, 2026, ISSN 1532-0464
Publisher: Elsevier BV
DOI: 10.1016/J.JBI.2025.104906

An AI-powered data curation and publishing virtual assistant: usability and explainability/causability of, and patient interest in the first-generation prototype

Author(s): Rutger van Mierlo, Wenjie Liang, Kerli Norak, Michaela Kargl, Mall Maasik, Anne-Lore Bynens, Markus Plass, Markus Kreuzthaler, Martin Benedikt, Laura Hochstenbach, Arnoud van 't Hof, Remzi Celebi, Andre Dekker, Isabelle de Zegher, Petros Kalendralis, null null
Published in: Frontiers in Digital Health, Issue 7, 2025, ISSN 2673-253X
Publisher: Frontiers Media SA
DOI: 10.3389/FDGTH.2025.1629413

PLoS ONE

Author(s): Mali, Shruti Atul; Rad, Nastaran Mohammadian; Woodruff, Henry C.; Depeursinge, Adrien; Andrearczyk, Vincent; Lambin, Philippe
Published in: PLOS One, 2025, ISSN 1932-6203
Publisher: Public Library of Science
DOI: 10.1371/JOURNAL.PONE.0322365

Combining Deep Learning and Handcrafted Radiomics for Classification of Suspicious Lesions on Contrast-enhanced Mammograms

Author(s): Manon P. L. Beuque, Marc B. I. Lobbes, Yvonka van Wijk, Yousif Widaatalla, Sergey Primakov, Michael Majer, Corinne Balleyguier, Henry C. Woodruff, Philippe Lambin
Published in: Radiology, Issue 307, 2023, ISSN 0033-8419
Publisher: Radiological Society of North America (RSNA)
DOI: 10.1148/RADIOL.221843

Leveraging hand-crafted radiomics on multicenter FLAIR MRI for predicting disability worsening in people with multiple sclerosis

Author(s): Hamza Khan, Henry C. Woodruff, Diana L. Giraldo, Lorin Werthen-Brabants, Shruti Atul Mali, Sina Amirrajab, Edward De Brouwer, Veronica Popescu, Bart Van Wijmeersch, Oliver Gerlach, Jan Sijbers, Liesbet M. Peeters, Philippe Lambin
Published in: Frontiers in Neuroscience, Issue 19, 2025, ISSN 1662-453X
Publisher: Frontiers Media SA
DOI: 10.3389/FNINS.2025.1610401

Knowledge graph embedding and alignment of incomplete electronic health records for critical care applications

Author(s): Shervin Mehryar, Michel Dumontier
Published in: Journal of Biomedical Semantics, Issue 17, 2026, ISSN 2041-1480
Publisher: Springer Science and Business Media LLC
DOI: 10.1186/S13326-026-00351-Y

Disambiguation of acronyms in clinical narratives with large language models

Author(s): Amila Kugic; Stefan Schulz; Markus Kreuzthaler
Published in: Journal of the American Medical Informatics Association, 2024, ISSN 1527-974X
Publisher: Oxford University Press
DOI: 10.1093/JAMIA/OCAE157

Deep Learning of Multimodal Ultrasound: Stratifying the Response to Neoadjuvant Chemotherapy in Breast Cancer Before Treatment

Author(s): Gu J, Zhong X, Fang C, Lou W, Fu P, Woodruff HC, Wang B, Jiang T, Lambin P.
Published in: The Oncologist, 2024, ISSN 1083-7159
Publisher: Oxford University Press
DOI: 10.1093/oncolo/oyad227

Generating Explanations in Medical Question-Answering by Expectation Maximization Inference over Evidence

Author(s): Wei Sun, Mingxiao Li, Damien Sileo, Jesse Davis, Marie-Francine Moens
Published in: ACM Transactions on Computing for Healthcare, Issue 6, 2025, ISSN 2637-8051
Publisher: Association for Computing Machinery (ACM)
DOI: 10.1145/3712296

Impact of synthetic data on training a deep learning model for lesion detection and classification in contrast-enhanced mammography

Author(s): Astrid Van Camp, Henry C. Woodruff, Lesley Cockmartin, Marc Lobbes, Michael Majer, Corinne Balleyguier, Nicholas W. Marshall, Hilde Bosmans, Philippe Lambin
Published in: Journal of Medical Imaging, Issue 12, 2025, ISSN 2329-4302
Publisher: SPIE-Intl Soc Optical Eng
DOI: 10.1117/1.JMI.12.S2.S22006

An automated toolbox for microcalcification cluster modeling for mammographic imaging

Author(s): Astrid Van Camp, Eva Punter, Katrien Houbrechts, Lesley Cockmartin, Renate Prevos, Nicholas W. Marshall, Henry C. Woodruff, Philippe Lambin, Hilde Bosmans
Published in: Medical Physics, Issue 52, 2025, ISSN 0094-2405
Publisher: Wiley
DOI: 10.1002/MP.17521

Generating Explanations in Medical Question-Answering by Expectation Maximization Inference over Evidence

Assessing Data Quality in Heterogeneous Health Care Integration: Simulation Study of the AIDAVA Framework

Author(s): Jens Declerck, Ömer Durukan Kılıç, Ensar Emir Erol, Shervin Mehryar, Dipak Kalra, Isabelle de Zegher, Remzi Celebi
Published in: JMIR Medical Informatics, Issue 13, 2026, ISSN 2291-9694
Publisher: JMIR Publications Inc.
DOI: 10.2196/75275

Imaging the hallmarks of cancer

Author(s): Jan Grimm, Fabian Kiessling, Kevin M. Brindle, Douglas Hanahan, Sanjay K. Jain, Philippe Lambin, Twan Lammers, King C. Li, I. Jolanda M. de Vries, Wolfgang A. Weber, Bettina Weigelin, Bernd J. Pichler
Published in: Nature Reviews Cancer, Issue 26, 2026, ISSN 1474-175X
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41568-026-00950-Y

A pre-trained foundation model framework for multiplanar MRI classification of extramural vascular invasion and mesorectal fascia invasion in rectal cancer

Author(s): Yumeng Zhang, Shruti Atul Mali, Danial Khan, Sina Amirrajab, Eduardo Ibor-Crespo, Ana Jimenez-Pastor, Gloria Ribas, Silvia Flor-Arnal, Marta Zerunian, Christophe Aubé, Luis Martí-Bonmatí, Zohaib Salahuddin, Philippe Lambin
Published in: Insights into Imaging, Issue 17, 2026, ISSN 1869-4101
Publisher: Springer Science and Business Media LLC
DOI: 10.1186/S13244-026-02296-3

FUTURE-AI: international consensus guideline for trustworthy and deployable artificial intelligence in healthcare

Author(s): Lekadir, Karim; Feragen, Aasa; Fofanah, Abdul Joseph; Frangi, Alejandro F; Buyx, Alena; Emelie, Anais; Lara, Andrea; Porras, Antonio R; Chan, An-Wen; Navarro, Arcadi; Glocker, Ben; Botwe, Benard O; Khanal, Bishesh; Beger, Brigit; Wu, Carol C; Cintas, Celia; Langlotz, Curtis P; Rueckert, Daniel; Mzurikwao, Deogratias; Fotiadis, Dimitrios I; Zhussupov, Doszhan; Ferrante, Enzo; Meijering, Erik; Weicken, Eva; González, Fabio A; Asselbergs, Folkert W; Prior, Fred; Krestin, Gabriel P; Collins, Gary; Tegenaw, Geletaw S; Kaissis, Georgios; Misuraca, Gianluca; Tsakou, Gianna; Dwivedi, Girish; Kondylakis, Haridimos; Jayakody, Harsha; Woodruf, Henry C; Mayer, Horst Joachim; Aerts, Hugo JWL; Walsh, Ian; Chouvarda, Ioanna; Buvat, Irène; Tributsch, Isabell; Rekik, Islem; Duncan, James; Kalpathy-Cramer, Jayashree; Zahir, Jihad; Park, Jinah; Mongan, John; Gichoya, Judy W; Schnabel, Julia A; Kushibar, Kaisar; Riklund, Katrine; Mori, Kensaku; Marias, Kostas; Amugongo, Lameck M; Fromont, Lauren A; Maier-Hein, Lena; Alberich, Leonor Cerdá; Rittner, Leticia; Phiri, Lighton; Marrakchi-Kacem, Linda; Donoso-Bach, Lluís; Martí-Bonmatí, Luis; Cardoso, M Jorge; Bobowicz, Maciej; Shabani, Mahsa; Tsiknakis, Manolis; Zuluaga, Maria A; Bielikova, Maria; Fritzsche, Marie-Christine; Camacho, Marina; Linguraru, Marius George; Wenzel, Markus; De Bruijne, Marleen; Tolsgaard, Martin G; Ghassemi, Marzyeh; Ashrafuzzaman, Md; Goisauf, Melanie; Yaqub, Mohammad; Abadía, Mónica Cano; Mahmoud, Mukhtar M E; Elattar, Mustafa; Rieke, Nicola; Papanikolaou, Nikolaos; Lazrak, Noussair; Díaz, Oliver; Salvado, Olivier; Pujol, Oriol; Sall, Ousmane; Guevara, Pamela; Gordebeke, Peter; Lambin, Philippe; Brown, Pieta; Abolmaesumi, Purang; Dou, Qi; Lu, Qinghua; Osuala, Richard; Nakasi, Rose; Zhou, S Kevin; Napel, Sandy; Colantonio, Sara; Albarqouni, Shadi; Joshi, Smriti; Carter, Stacy; Klein, Stefan; Petersen, Steffen E; Aussó, Susanna; Awate, Suyash; Raviv, Tammy Riklin; Cook, Tessa; Mutsvangwa, Tinashe E M; Rogers, Wendy A; Niessen, Wiro J; Puig-Bosch, Xènia; Zeng, Yi; Mohammed, Yunusa G; Aquino, Yves Saint James; Salahuddin, Zohaib; Starmans, Martijn P A
Published in: BMJ, 2025, ISSN 0007-1447
Publisher: BMJ Publishing Group
DOI: 10.48550/ARXIV.2309.12325

Improving Heart-Failure Predictive Tasks with Patient Health Knowledge Graphs and Sequential Graph Neural Networks

Author(s): Shervin Mehryar, Michel Dumontier
Published in: Electronics, Issue 15, 2026, ISSN 2079-9292
Publisher: MDPI AG
DOI: 10.3390/ELECTRONICS15102189

Cancers

Author(s): Yousif Widaatalla; Tom Wolswijk; Muhammad Danial Khan; Iva Halilaj; Klara Mosterd; Henry C. Woodruff; Philippe Lambin
Published in: Cancers, 2025, ISSN 2072-6694
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/CANCERS17050768

Predicting homologous recombination deficiency and treatment responses using a computed tomography-based foundation model: a preclinical study

Author(s): Sheng Kuang, Lesley Schuitmaker, Min Wu, Zohaib Salahuddin, Alexander van der Wiel, Jella van de Laak, Natasja Lieuwes, Rianne Biemans, Jennifer Jung, Ala Yaromina, Ludwig J. Dubois, Henry C. Woodruff, Philippe Lambin
Published in: npj Precision Oncology, Issue 10, 2026, ISSN 2397-768X
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41698-026-01322-3

Pushing the boundaries of radiotherapy-immunotherapy combinations: highlights from the 7 <sup>th</sup> immunorad conference

Author(s): Pierre-Antoine Laurent; Fabrice André; Alexandre Bobard; Desiree Deandreis; Sandra Demaria; Stephane Depil; Stefan B. Eichmüller; Cristian Fernandez-Palomo; Floris Foijer; Lorenzo Galluzzi; Jérôme Galon; Matthias Guckenberger; Kevin J. Harrington; Fernanda G. Herrera; Peter E. Huber; Antoine Italiano; Sana D. Karam; Guido Kroemer; Philippe Lambin; Carola Leuschner; Alberto Mantovani; Etienne Meylan; Michele Mondini; Mikael J. Pittet; Jean-Pierre Pouget; Jordi Remon; Claus S. Sørensen; Christos Sotiriou; Claire Vanpouille-Box; Ralph R. Weichselbaum; James W. Welsh; Laurence Zitvogel; Silvia C. Formenti; Eric Deutsch
Published in: OncoImmunology, 2024, ISSN 2162-402X
Publisher: Taylor and Francis Ltd.
DOI: 10.48620/84672

Kommunikationsfähigkeit und Interoperabilität von Gesundheitsdaten in einem vernetzten Gesundheitssystem

Author(s): Philipp Daumke, Christian Haverkamp, Simone Heckmann, Marcus Kuper, Annett Müller, Frank Oemig, Uta Ripperger, Stefan Sabutsch, André Sander & Stefan Schulz
Published in: Health Data Management, 2024
Publisher: Springer Gabler, Wiesbaden
DOI: 10.1007/978-3-658-43236-2_41

Language Fusion for Parameter-Efficient Cross-lingual Transfer

Author(s): Philipp Borchert, Ivan Vulić, Marie-Francine Moens, Jochen De Weerdt
Published in: Proceedings of the 63rd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2025
Publisher: Association for Computational Linguistics
DOI: 10.18653/V1/2025.ACL-LONG.1255

SULO – a simplified upper-level ontology

Author(s): Dumontier, Michel; Çelebi, Remzi; Gilani, Komal; de Zegher, Isabelle; Serafimova, Katerina; Costa, Catalina Martínez; Schulz, Stefan
Published in: CEUR Workshop Proceedings, Issue 4176, 2025
Publisher: CEUR-WS

Towards Explainability in Automated Medical Code Prediction from Clinical Records

Author(s): Kanimozhi Uma, Sumam Francis, Wei Sun, Marie-Francine Moens
Published in: Lecture Notes in Networks and Systems, Intelligent Systems and Applications, 2024
Publisher: Springer, Cham
DOI: 10.1007/978-3-031-47718-8_40

Simulated image-specific microcalcification clusters and associated mass enhancement to enhance training of a deep learning model for cancer detection in contrast-enhanced mammography

Author(s): Astrid Van Camp, Henry C. Woodruff, Lesley Cockmartin, Nicholas W. Marshall, Hilde Bosmans, Philippe Lambin
Published in: 17th International Workshop on Breast Imaging (IWBI 2024), 2024
Publisher: SPIE
DOI: 10.1117/12.3026879

Toward a Unified Framework for Realizable Entities: Dispositions, Plans, and Beyond

Author(s): Schulz, Stefan; Dumontier, Michel; Çelebi, Remzi; Serafimova, Katerina; Costa, Catalina Martínez
Published in: CEUR Workshop Proceedings, Issue 4176, 2025
Publisher: CEUR-WS

Masking Language Model Mechanism with Event-Driven Knowledge Graphs for Temporal Relations Extraction from Clinical Narratives

Author(s): Kanimozhi Uma, Sumam Francis, Marie-Francine Moens
Published in: Studies in Computational Intelligence, Complex Networks & Their Applications XII, 2024
Publisher: Springer, Cham
DOI: 10.1007/978-3-031-53468-3_14

A two-method framework for aligning medical terminologies

Author(s): Ostaszewski, Stan; Kılıç, Ömer Durukan; Erol, Ensar Emir; Dumontier, Michel; Celebi, Remzi
Published in: CEUR Workshop Proceedings, ISSN 1613-0073
Publisher: CEUR-WS.org

Towards principles of ontology-based annotation of clinical narratives

Author(s): Schulz S, Del-Pinto W, Han L, Kreuzthaler M, Aghaei S, Nenadic G
Published in: 2023, ISSN 1613-0073
Publisher: CEUR-WS

Simulated image-specific microcalcification clusters and associated mass enhancement to enhance training of a deep learning model for cancer detection in contrast-enhanced mammography

Mitigating Negative Interference in Multilingual Knowledge Editing through Null-Space Constraints

Author(s): Wei Sun, Tingyu Qu, Mingxiao Li, Jesse Davis, Marie-Francine Moens
Published in: Findings of the Association for Computational Linguistics: ACL 2025, 2025
Publisher: Association for Computational Linguistics
DOI: 10.18653/V1/2025.FINDINGS-ACL.460

Biomedical Ontology Matching using Relational Graph Neural Networks and RDFs Meta-Path Rules

Author(s): Mehryar, Shervin; Loesch, Julie; Pinckers, Emma; van den Akker, Alan; Damoiseaux, Yannick; Stavrinopoulos, Athanasios; Prianikov, Nikola; Celebi, Remzi
Published in: CEUR Workshop Proceedings, Issue 4196, 2025
Publisher: CEUR-WS

Unraveling Clinical Insights: A Lightweight and Interpretable Approach for Multimodal and Multilingual Knowledge Integration

Author(s): Uma, Kanimozhi ; Moens, Marie Francine
Published in: Proceedings of the First Workshop on Patient-Oriented Language Processing (CL4Health)@ LREC-COLING 2024, 2024
Publisher: European Language Resources Association (ELRA)

Semantic Annotation of Tabular Data for Machine-to-Machine Interoperability via Neuro-Symbolic Anchoring

Author(s): Mehryar S, Celebi R
Published in: 2023, ISSN 1613-0073
Publisher: CEUR-WS

Weakly-supervised Argument Mining with Boundary Refinement and Relation Denoising

Author(s): Wei Sun, Mingxiao Li, Jesse Davis, Elena Cabrio, Serena Villata, Marie-Francine Moens
Published in: Proceedings of the Ninth Fact Extraction and VERification Workshop (FEVER), 2026
Publisher: Association for Computational Linguistics
DOI: 10.18653/V1/2026.FEVER-1.1

A Resolution-Alignment-Completeness System for Diagnosis Code Imputation in Clinical Knowledge Graphs

Author(s): Mehryar, Shervin; Erten, Özge; Asamov, Tsvetan; Boytcheva, Svetla; Çelebi, Remzi
Published in: CEUR Workshop Proceedings, Issue 4196, 2025
Publisher: CEUR-WS

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