Project description
Understanding the effects of phages on bacterial tolerance
As the most abundant life forms on Earth, bacteriophages show promise as antimicrobial agents. However, their high specificity limits medical use, and their mechanisms of action are poorly understood. The ERC-funded PhaBacArms project will create a library of phages targeting Pseudomonas putida PaW85 to explore the hypothesis that toxin-antitoxin systems (TAS) and stringent responses are involved in phage defence. The project will study their effects on bacterial tolerance, identify phage proteins that counteract TAS and stringent responses, and assess the toxicity of phage-derived toxins across various bacteria. The project will advance the research of phage-tolerant bioremediation strains and provide crucial basic knowledge that can lead to the development of novel, efficient phage therapy solutions.
Objective
Bacteriophages, viruses of bacteria, are the most abundant life form on Earth. The prospect of using them in the fight against pathogenic bacteria has long been recognised, but their very high specificity and unpredictable reproduction limits their use in medicine. The mechanisms phages use to fight bacteria are attractive candidates for the development of novel antimicrobial applications, but are still very poorly understood. Indirect evidence exists of toxin antitoxin systems (TAS) and stringent response involvement in phage defence. The constant co-evolution of phages and bacteria suggests that phages have a way of overcoming all of the wide variety of bacterial defence systems, yet, no direct phage mechanisms targeting bacterial stringent response have been identified.
We hypothesise that as the bacterial toxin-antitoxin systems and stringent response play a part in the arms race between bacteria and phages we can provide direct molecular evidence and identify phage proteins involved in these interactions by (1) creating and characterising, morphologically and molecularly, a novel library of phages infecting Pseudomonas putida PaW85; (2) uncovering the stringent response- and TAS-mediated phenotypic effects and their molecular mechanisms on P. putida phage tolerance; (3) discovering and characterising, functionally and structurally, the anti-TAS and anti-stringent response phage effectors; (4) determining the toxicity and specificity of the identified phage-derived toxins by testing them on different bacterial species. This study will bridge several gaps in the phage-bacteria interaction research, advance the research of phage-tolerant bioremediation strains and give crucial basic knowledge that can lead to the development of novel, efficient phage therapy solutions that target bacterial stress-mechanisms.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences microbiology bacteriology
- natural sciences biological sciences microbiology virology
- engineering and technology environmental biotechnology bioremediation
- natural sciences biological sciences biochemistry biomolecules proteins
- natural sciences biological sciences evolutionary biology
You need to log in or register to use this function
Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
-
HORIZON.1.1 - European Research Council (ERC)
MAIN PROGRAMME
See all projects funded under this programme
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
HORIZON-ERC - HORIZON ERC Grants
See all projects funded under this funding scheme
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
(opens in new window) ERC-2023-STG
See all projects funded under this callHost institution
Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.
51005 Tartu
Estonia
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.