EBRAINS 2.0: A Research Infrastructure to Advance Neuroscience and Brain Health

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

D3.6 Co-design strategy for WP3

Report on the strategy that WP3 will follow to perform co-design activities with other partners in the project and external stakeholders.

D6.5 Co-design strategy for WP6

Report on the strategy that WP6 will follow to perform co-design activities with other partners in the project and external stakeholders.

D1.6 Co-design strategy for WP1

Report on the strategy that WP1 will follow to perform co-design activities with other partners in the project and external stakeholders.

D8.9 Plans and processes for the governance of the Project

Summary document describing plans and processes for the governance of the Project ready

D2.4 Strategy for 5M connectome data acquisition

Report on the strategy to follow during the multi-site acquisition of the 5M connectome dataset

D4.4 Co-design strategy for WP4

Report on the strategy that WP4 will follow to perform co-design activities with other partners in the project and external stakeholders.

D5.5 Co-design strategy for WP5

Report on the strategy that WP5 will follow to perform co-design activities with other partners in the project and external stakeholders.

D2.5 Co-design strategy for WP2

Develop a co-design activity in which members of the EAN will be polled about their competence and interest on new connectomics methods to study clinical conditions.

Publications

Metadata practices for simulation workflows

Auteurs: José Villamar, Matthias Kelbling, Heather L. More, Michael Denker, Tom Tetzlaff, Johanna Senk, Stephan Thober
Publié dans: Scientific Data, Numéro 12, 2025, ISSN 2052-4463
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41597-025-05126-1

Evidence for an Evolutionary Continuity in Social Dominance: Insights from Nonhuman Primate Tractography

Auteurs: Julie Royo, Thomas Orset, Marco Catani, Pierre Pouget, Michel Thiebaut de Schotten
Publié dans: The Journal of Neuroscience, Numéro 45, 2025, ISSN 0270-6474
Éditeur: Society for Neuroscience
DOI: 10.1523/JNEUROSCI.1646-24.2025

Modeling nitric oxide diffusion and plasticity modulation in cerebellar learning

Auteurs: Alessandra Maria Trapani, Carlo Andrea Sartori, Benedetta Gambosi, Alessandra Pedrocchi, Alberto Antonietti
Publié dans: APL Bioengineering, Numéro 9, 2025, ISSN 2473-2877
Éditeur: AIP Publishing
DOI: 10.1063/5.0250953

An extended and improved CCFv3 annotation and Nissl atlas of the entire mouse brain

Auteurs: Sébastien Piluso; Csaba Verasztó; Harry Carey; Émilie Delattre; Thibaud L’Yvonnet; Éloïse Colnot; Armando Romani; Jan G. Bjaalie; Henry Markram; Daniel Keller
Publié dans: Imaging Neuroscience, 2025, ISSN 2837-6056
Éditeur: MIT Press Direct
DOI: 10.1101/2024.11.06.622212

Neurobiology of Disease

Auteurs: Lorenzo Pini; Giuseppe Lombardi; Giulio Sansone; Matteo Gaiola; Marta Padovan; Francesco Volpin; Luca Denaro; Maurizio Corbetta; Alessandro Salvalaggio
Publié dans: Neurobiology of Disease, 2024, ISSN 0969-9961
Éditeur: Academic Press
DOI: 10.1016/J.NBD.2024.106521

Lu.i – A low-cost electronic neuron for education and outreach

Auteurs: Yannik Stradmann, Julian Göltz, Mihai A. Petrovici, Johannes Schemmel, Sebastian Billaudelle
Publié dans: Trends in Neuroscience and Education, Numéro 38, 2025, ISSN 2211-9493
Éditeur: Elsevier BV
DOI: 10.1016/J.TINE.2025.100248

Frontiers in Neuroanatomy

Auteurs: Ivan Velasco; Juan J. Garcia-Cantero; Juan J. Garcia-Cantero; Juan P. Brito; Juan P. Brito; Sofia Bayona; Sofia Bayona; Luis Pastor; Luis Pastor; Susana Mata; Susana Mata
Publié dans: Frontiers in Neuroanatomy, 2024, ISSN 1662-5129
Éditeur: Frontiers Research Foundation
DOI: 10.3389/FNANA.2024.1342762

Frontiers in Computational Neuroscience

Auteurs: Astrid Correa; Adam Ponzi; Adam Ponzi; Vladimir M. Calderón; Rosanna Migliore
Publié dans: Frontiers in Computational Neuroscience, 2024, ISSN 1662-5188
Éditeur: Frontiers Research Foundation
DOI: 10.3389/FNCOM.2024.1410335

Scientific Reports

Auteurs: Rocha R. P.; Zorzi M.; Corbetta M.
Publié dans: Scientific Reports, 2024, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/S41598-024-80196-6

Nature Communications

Auteurs: Pedro Nascimento Alves; Victor Nozais; Justine Y. Hansen; Maurizio Corbetta; Parashkev Nachev; Isabel Pavão Martins; Michel Thiebaut de Schotten
Publié dans: Nature Communications, 2025, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.21203/RS.3.RS-3937453/V1

Mathematical Biosciences

Auteurs: A. Marasco; C. Tribuzi; A. Iuorio; M. Migliore
Publié dans: Mathematical Biosciences, 2023, ISSN 0025-5564
Éditeur: Elsevier
DOI: 10.1101/2023.04.03.535350

Navigating Conflicting Interests: The Role of Gender Competent Management for Effective Gender Equality Plans

Auteurs: Angela Wroblewski, Karin Grasenick
Publié dans: Social Inclusion, Numéro 13, 2025, ISSN 2183-2803
Éditeur: Cogitatio
DOI: 10.17645/SI.9992

Multimodal gradients unify local and global cortical organization

Auteurs: Yezhou Wang, Nicole Eichert, Casey Paquola, Raul Rodriguez-Cruces, Jordan DeKraker, Jessica Royer, Donna Gift Cabalo, Hans Auer, Alexander Ngo, Ilana R. Leppert, Christine L. Tardif, David A. Rudko, Robert Leech, Katrin Amunts, Sofie L. Valk, Jonathan Smallwood, Alan C. Evans, Boris C. Bernhardt
Publié dans: Nature Communications, Numéro 16, 2025, ISSN 2041-1723
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41467-025-59177-4

Modeling impairment of ionic regulation with extended Adaptive Exponential integrate-and-fire models

Auteurs: Damien Depannemaecker, Federico Tesler, Mathieu Desroches, Viktor Jirsa, Alain Destexhe
Publié dans: Journal of Computational Neuroscience, Numéro 53, 2025, ISSN 0929-5313
Éditeur: Springer Science and Business Media LLC
DOI: 10.1007/S10827-025-00893-7

New organizational principles and 3D cytoarchitectonic maps of the dorsolateral prefrontal cortex in the human brain

Auteurs: Ariane Bruno, Kimberley Lothmann, Sebastian Bludau, Hartmut Mohlberg, Katrin Amunts
Publié dans: Frontiers in Neuroimaging, Numéro 3, 2024, ISSN 2813-1193
Éditeur: Frontiers Media SA
DOI: 10.3389/FNIMG.2024.1339244

Synchronization in spiking neural networks with short and long connections and time delays

Auteurs: Lionel Kusch, Martin Breyton, Damien Depannemaecker, Spase Petkoski, Viktor K. Jirsa
Publié dans: Chaos: An Interdisciplinary Journal of Nonlinear Science, Numéro 35, 2025, ISSN 1054-1500
Éditeur: AIP Publishing
DOI: 10.1063/5.0158186

Principles and Operation of Virtual Brain Twins

Auteurs: Meysam Hashemi, Damien Depannemaecker, Marisa Saggio, Paul Triebkorn, Giovanni Rabuffo, Jan Fousek, Abolfazl Ziaeemehr, Viktor Sip, Anastasios Athanasiadis, Martin Breyton, Marmaduke Woodman, Huifang Wang, Spase Petkoski, Pierpaolo Sorrentino, Viktor Jirsa
Publié dans: IEEE Reviews in Biomedical Engineering, 2025, ISSN 1937-3333
Éditeur: Institute of Electrical and Electronics Engineers (IEEE)
DOI: 10.1109/RBME.2025.3562951

Linking cellular-level phenomena to brain architecture: the case of spiking cerebellar controllers

Auteurs: Egidio D’Angelo, Alberto Antonietti, Alice Geminiani, Benedetta Gambosi, Cristiano Alessandro, Emiliano Buttarazzi, Alessandra Pedrocchi, Claudia Casellato
Publié dans: Neural Networks, Numéro 188, 2025, ISSN 0893-6080
Éditeur: Elsevier BV
DOI: 10.1016/J.NEUNET.2025.107538

The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases

Auteurs: Camilla H. Blixhavn, Ingrid Reiten, Heidi Kleven, Martin Øvsthus, Sharon C. Yates, Ulrike Schlegel, Maja A. Puchades, Oliver Schmid, Jan G. Bjaalie, Ingvild E. Bjerke, Trygve B. Leergaard
Publié dans: Frontiers in Neuroinformatics, Numéro 18, 2024, ISSN 1662-5196
Éditeur: Frontiers Media SA
DOI: 10.3389/FNINF.2024.1284107

Scientific Reports

Auteurs: Rocha R. P.; Zorzi M.; Corbetta M.
Publié dans: Scientific Reports, 2024, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/S41598-024-80196-6

Identifying sources of bias when testing three available algorithms for quantifying white matter lesions: BIANCA, LPA and LGA

Auteurs: Tatiana Miller, Nora Bittner, Susanne Moebus, Svenja Caspers
Publié dans: GeroScience, Numéro 47, 2024, ISSN 2509-2723
Éditeur: Springer Science and Business Media LLC
DOI: 10.1007/S11357-024-01306-W

Digital tools of analysis and data integration facilitate synergy between mouse and human brain research and enable translation

Auteurs: Sabine M. Hölter, Lillian Garrett, Sebastian Bludau, Katrin Amunts
Publié dans: Mammalian Genome, Numéro 35, 2024, ISSN 0938-8990
Éditeur: Springer Science and Business Media LLC
DOI: 10.1007/S00335-024-10072-1

Nature Communications

The developing mouse dopaminergic system: Cortical-subcortical shift in D1/D2 receptor balance and increasing regional differentiation

Auteurs: Ingvild E. Bjerke, Harry Carey, Jan G. Bjaalie, Trygve B. Leergaard, Jee Hyun Kim
Publié dans: Neurochemistry International, Numéro 182, 2025, ISSN 0197-0186
Éditeur: Elsevier BV
DOI: 10.1016/J.NEUINT.2024.105899

Considerations and recommendations from the <scp>ISMRM</scp> diffusion study group for preclinical diffusion <scp>MRI</scp>: Part 1: In vivo small‐animal imaging

Auteurs: Ileana O. Jelescu, Francesco Grussu, Andrada Ianus, Brian Hansen, Rachel L. C. Barrett, Manisha Aggarwal, Stijn Michielse, Fatima Nasrallah, Warda Syeda, Nian Wang, Jelle Veraart, Alard Roebroeck, Andrew F. Bagdasarian, Cornelius Eichner, Farshid Sepehrband, Jan Zimmermann, Lucas Soustelle, Christien Bowman, Benjamin C. Tendler, Andreea Hertanu, Ben Jeurissen, Marleen Verhoye, Lucio Frydman, Yohan van de Looij, David Hike, Jeff F. Dunn, Karla Miller, Bennett A. Landman, Noam Shemesh, Adam Anderson, Emilie McKinnon, Shawna Farquharson, Flavio Dell'Acqua, Carlo Pierpaoli, Ivana Drobnjak, Alexander Leemans, Kevin D. Harkins, Maxime Descoteaux, Duan Xu, Hao Huang, Mathieu D. Santin, Samuel C. Grant, Andre Obenaus, Gene S. Kim, Dan Wu, Denis Le Bihan, Stephen J. Blackband, Luisa Ciobanu, Els Fieremans, Ruiliang Bai, Trygve B. Leergaard, Jiangyang Zhang, Tim B. Dyrby, G. Allan Johnson, Julien Cohen‐Adad, Matthew D. Budde, Kurt G. Schilling
Publié dans: Magnetic Resonance in Medicine, Numéro 93, 2025, ISSN 0740-3194
Éditeur: Wiley
DOI: 10.1002/MRM.30429

The coming decade of digital brain research: A vision for neuroscience at the intersection of technology and computing

Auteurs: Katrin Amunts, Markus Axer, Swati Banerjee, Lise Bitsch, Jan G. Bjaalie, Philipp Brauner, Andrea Brovelli, Navona Calarco, Marcel Carrere, Svenja Caspers, Christine J. Charvet, Sven Cichon, Roshan Cools, Irene Costantini, Egidio Ugo D’Angelo, Giulia De Bonis, Gustavo Deco, Javier DeFelipe, Alain Destexhe, Timo Dickscheid, Markus Diesmann, Emrah Düzel, Simon B. Eickhoff, Gaute Einevoll, Damian Eke, Andreas K. Engel, Alan C. Evans, Kathinka Evers, Nataliia Fedorchenko, Stephanie J. Forkel, Jan Fousek, Angela D. Friederici, Karl Friston, Stephen Furber, Liesbet Geris, Rainer Goebel, Onur Güntürkün, Aini Ismafairus Abd Hamid, Christina Herold, Claus C. Hilgetag, Sabine M. Hölter, Yannis Ioannidis, Viktor Jirsa, Sriranga Kashyap, Burkhard S. Kasper, Alban de Kerchove d’Exaerde, Roxana Kooijmans, István Koren, Jeanette Hellgren Kotaleski, Gregory Kiar, Wouter Klijn, Lars Klüver, Alois C. Knoll, Zeljka Krsnik, Julia Kämpfer, Matthew E Larkum, Marja-Leena Linne, Thomas Lippert, Jafri Malin Abdullah, Paola Di Maio, Neville Magielse, Pierre Maquet, Anna Letizia Allegra Mascaro, Daniele Marinazzo, Jorge Mejias, Andreas Meyer-Lindenberg, Michele Migliore, Judith Michael, Yannick Morel, Fabrice O. Morin, Lars Muckli, Guy Nagels, Lena Oden, Nicola Palomero-Gallagher, Fanis Panagiotaropoulos, Pier Stanislao Paolucci, Cyriel Pennartz, Liesbet M. Peeters, Spase Petkoski, Nicolai Petkov, Lucy S. Petro, Mihai A. Petrovici, Giovanni Pezzulo, Pieter Roelfsema, Laurence Ris, Petra Ritter, Kathleen Rockland, Stefan Rotter, Andreas Rowald, Sabine Ruland, Philippe Ryvlin, Arleen Salles, Maria V. Sanchez-Vives, Johannes Schemmel, Walter Senn, Alexandra A. de Sousa, Felix Ströckens, Bertrand Thirion, Kâmil Uludağ, Simo Vanni, Sacha Jennifer van Albada, Wim Vanduffel, Julien Vezoli, Lisa Vincenz-Donnelly, Florian Walter, Laszlo Zaborszky
Publié dans: Imaging Neuroscience, Numéro 2, 2024, ISSN 2837-6056
Éditeur: MIT Press
DOI: 10.1162/IMAG_A_00137

Nature Communications

Auteurs: Pacella, Valentina; Nozais, Victor; Talozzi, Lia; Abdallah, Majd; Wassermann, Demian; Forkel, Stephanie; Thiebaut de Schotten, Michel
Publié dans: Nature Communications, 2024, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/S41467-024-52186-9

Bifurcations and bursting in the Epileptor

Auteurs: Maria Luisa Saggio, Viktor Jirsa
Publié dans: PLOS Computational Biology, Numéro 20, 2024, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/JOURNAL.PCBI.1011903

Time to bury the chisel: a continuous dorsal association tract system

Auteurs: Hoven, Emiel van den; Reisert, Marco; Musso, Mariacristina; Glauche, Volkmar; Rijntjes, Michel; Weiller, Cornelius
Publié dans: Brain Structure and Function, 2024, ISSN 1863-2661
Éditeur: Springer
DOI: 10.1007/S00429-024-02829-W

Frontiers in Computational Neuroscience

Modeling realistic synaptic inputs of CA1 hippocampal pyramidal neurons and interneurons via Adaptive Generalized Leaky Integrate-and-Fire models

Auteurs: A. Marasco, C. Tribuzi, C.A. Lupascu, M. Migliore
Publié dans: Mathematical Biosciences, Numéro 372, 2024, ISSN 0025-5564
Éditeur: Elsevier BV
DOI: 10.1016/J.MBS.2024.109192

Semaphorin-3A regulates liver sinusoidal endothelial cell porosity and promotes hepatic steatosis

Auteurs: Daniel Eberhard, Sydney Balkenhol, Andrea Köster, Paula Follert, Eric Upschulte, Philipp Ostermann, Philip Kirschner, Celina Uhlemeyer, Iannis Charnay, Christina Preuss, Sandra Trenkamp, Bengt-Frederik Belgardt, Timo Dickscheid, Irene Esposito, Michael Roden, Eckhard Lammert
Publié dans: Nature Cardiovascular Research, Numéro 3, 2024, ISSN 2731-0590
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S44161-024-00487-Z

Comparison of basal ganglia regions across murine brain atlases using metadata models and the Waxholm Space

Auteurs: H. Kleven, U. Schlegel, H. J. Groenewegen, T. B. Leergaard, I. E. Bjerke
Publié dans: Scientific Data, Numéro 11, 2024, ISSN 2052-4463
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41597-024-03863-3

Inference on the Macroscopic Dynamics of Spiking Neurons

Auteurs: Nina Baldy, Martin Breyton, Marmaduke M. Woodman, Viktor K. Jirsa, Meysam Hashemi
Publié dans: Neural Computation, 2024, ISSN 0899-7667
Éditeur: MIT Press
DOI: 10.1162/NECO_A_01701

Nature Communications

Interdisciplinary and Collaborative Training in Neuroscience: Insights from the Human Brain Project Education Programme

Auteurs: Alice Geminiani, Judith Kathrein, Alper Yegenoglu, Franziska Vogel, Marcelo Armendariz, Ziv Ben-Zion, Petrut Antoniu Bogdan, Joana Covelo, Marissa Diaz Pier, Karin Grasenick, Vitali Karasenko, Wouter Klijn, Tina Kokan, Carmen Alina Lupascu, Anna Lührs, Tara Mahfoud, Taylan Özden, Jens Egholm Pedersen, Luca Peres, Ingrid Reiten, Nikola Simidjievski, Inga Ulnicane, Michiel van der Vlag, Lyuba Zehl, Alois Saria, Sandra Diaz-Pier, Johannes Passecker
Publié dans: Neuroinformatics, Numéro 22, 2024, ISSN 1559-0089
Éditeur: Springer Science and Business Media LLC
DOI: 10.1007/S12021-024-09682-6

White matter changes after Gamma Knife Capsulotomy in patients with intractable obsessive-compulsive disorder

Auteurs: Giorgio Spatola, Paul Triebkorn, Raphaelle Richieri, Christelle Baunez, Jean Farisse, Axelle Cretol, Eric Guedj, Viktor Jirsa, Jean Regis
Publié dans: Heliyon, Numéro 10, 2024, ISSN 2405-8440
Éditeur: Elsevier BV
DOI: 10.1016/J.HELIYON.2024.E34699

Cerebellar control over inter-regional excitatory/inhibitory dynamics discriminates execution from observation of an action

Auteurs: Roberta Maria Lorenzi; Gökçe Korkmaz; Adnan A.S. Alahmadi; Anita Monteverdi; Letizia Casiraghi; Egidio D’Angelo; Fulvia Palesi; Claudia A.M. Gandini Wheeler-Kingshott
Publié dans: The Cerebellum, 2025, ISSN 1473-4230
Éditeur: Springer Nature
DOI: 10.1101/2024.05.21.595114

Self-supervised representation learning for nerve fiber distribution patterns in 3D-PLI

Auteurs: Alexander Oberstrass, Sascha E.A. Muenzing, Meiqi Niu, Nicola Palomero-Gallagher, Christian Schiffer, Markus Axer, Katrin Amunts, Timo Dickscheid
Publié dans: Imaging Neuroscience, Numéro 2, 2024, ISSN 2837-6056
Éditeur: MIT Press
DOI: 10.1162/IMAG_A_00351

A Model with Dopamine Depletion in Basal Ganglia and Cerebellum Predicts Changes in Thalamocortical Beta Oscillations

Auteurs: Benedetta Gambosi, Francesco Jamal Sheiban, Marco Biasizzo, Alberto Antonietti, Egidio D’angelo, Alberto Mazzoni, Alessandra Pedrocchi
Publié dans: International Journal of Neural Systems, Numéro 34, 2024, ISSN 0129-0657
Éditeur: World Scientific Pub Co Pte Ltd
DOI: 10.1142/S012906572450045X

Simulation-based inference on virtual brain models of disorders

Auteurs: Meysam Hashemi, Abolfazl Ziaeemehr, Marmaduke M Woodman, Jan Fousek, Spase Petkoski, Viktor K Jirsa
Publié dans: Machine Learning: Science and Technology, Numéro 5, 2024, ISSN 2632-2153
Éditeur: IOP Publishing
DOI: 10.1088/2632-2153/AD6230

Scalable network emulation on analog neuromorphic hardware

Auteurs: Elias Arnold, Philipp Spilger, Jan V. Straub, Eric Müller, Dominik Dold, Gabriele Meoni, Johannes Schemmel
Publié dans: Frontiers in Neuroscience, Numéro 18, 2025, ISSN 1662-453X
Éditeur: Frontiers Media SA
DOI: 10.3389/FNINS.2024.1523331

Mesoscale simulations predict the role of synergistic cerebellar plasticity during classical eyeblink conditioning

Auteurs: Alice Geminiani, Claudia Casellato, Henk-Jan Boele, Alessandra Pedrocchi, Chris I. De Zeeuw, Egidio D’Angelo
Publié dans: PLOS Computational Biology, Numéro 20, 2024, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/JOURNAL.PCBI.1011277

Cytoarchitectonic Analysis and 3D Maps of the Mesial Piriform Region in the Human Brain

Auteurs: Olga Kedo, Sebastian Bludau, Christian Schiffer, Hartmut Mohlberg, Timo Dickscheid, Katrin Amunts
Publié dans: Anatomia, Numéro 3, 2024, ISSN 2813-0545
Éditeur: MDPI AG
DOI: 10.3390/ANATOMIA3020007

Spatially integrated cortico-subcortical tracing data for analyses of rodent brain topographical organization

Auteurs: Martin Øvsthus, Maaike M. H. van Swieten, Maja A. Puchades, Chiara Tocco, Michèle Studer, Jan G. Bjaalie, Trygve B. Leergaard
Publié dans: Scientific Data, Numéro 11, 2024, ISSN 2052-4463
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41597-024-04060-Y

Association between night shift work and markers of metabolism, cardiovascular and immune system in a population-based German cohort

Auteurs: Nora Bittner, Horst-Werner Korf, Susanne Moebus, Börge Schmidt, Svenja Caspers
Publié dans: GeroScience, Numéro 47, 2025, ISSN 2509-2723
Éditeur: Springer Science and Business Media LLC
DOI: 10.1007/S11357-025-01596-8

The impact of Parkinson’s disease on striatal network connectivity and cortico-striatal drive: an in-silico study

Auteurs: Ilaria Carannante; Martina Scolamiero; J. J. Johannes Hjorth; Alexander Kozlov; Bo Bekkouche; Lihao Guo; Arvind Kumar; Wojciech Chachólski; Jeanette Hellgren Kotaleski
Publié dans: Network Neuroscience, 2024, ISSN 2472-1751
Éditeur: MIT Press
DOI: 10.1162/NETN_A_00394

Reconciliation of weak pairwise spike–train correlations and highly coherent local field potentials across space

Auteurs: Johanna Senk, Espen Hagen, Sacha J van Albada, Markus Diesmann
Publié dans: Cerebral Cortex, Numéro 34, 2024, ISSN 1047-3211
Éditeur: Oxford University Press (OUP)
DOI: 10.1093/CERCOR/BHAE405

Prediction of Verbal Abilities From Brain Connectivity Data Across the Lifespan Using a Machine Learning Approach

Auteurs: Deborah Früh, Camilla Mendl‐Heinisch, Nora Bittner, Susanne Weis, Svenja Caspers
Publié dans: Human Brain Mapping, Numéro 46, 2025, ISSN 1065-9471
Éditeur: Wiley
DOI: 10.1002/HBM.70191

Region-specific mean field models enhance simulations of local and global brain dynamics

Auteurs: Roberta Maria Lorenzi, Fulvia Palesi, Claudia Casellato, Claudia A. M. Gandini Wheeler-Kingshott, Egidio D’Angelo
Publié dans: npj Systems Biology and Applications, Numéro 11, 2025, ISSN 2056-7189
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41540-025-00543-9

Mathematical generation of data-driven hippocampal CA1 pyramidal neurons and interneurons copies via A-GLIF models for large-scale networks covering the experimental variability range

Auteurs: A. Marasco, C. Tribuzi, A. Iuorio, M. Migliore
Publié dans: Mathematical Biosciences, Numéro 371, 2024, ISSN 0025-5564
Éditeur: Elsevier BV
DOI: 10.1016/J.MBS.2024.109179

Kinetics and functional consequences of BK channels activation by N-type Ca2+ channels in the dendrite of mouse neocortical layer-5 pyramidal neurons

Auteurs: Laila Ananda Blömer, Elisabetta Giacalone, Fatima Abbas, Luiza Filipis, Domenico Tegolo, Michele Migliore, Marco Canepari
Publié dans: Frontiers in Cellular Neuroscience, Numéro 18, 2024, ISSN 1662-5102
Éditeur: Frontiers Media SA
DOI: 10.3389/FNCEL.2024.1353895

MRI R2* captures inflammation in disconnected brain structures after stroke: a translational study

Auteurs: Ismail Koubiyr, Takayuki Yamamoto, Laurent Petit, Nadège Dubourdieu, Elena Avignone, Elise Cozensa, Chloé Galmiche, Hikaru Fukutomi, Igor Sibon, Vincent Dousset, Michel Thiebaut de Schotten, Aude Panatier, Marion Tible, Thomas Tourdias
Publié dans: Brain, 2025, ISSN 0006-8950
Éditeur: Oxford University Press (OUP)
DOI: 10.1101/2024.11.18.624105

Principles and Operation of Virtual Brain Twins

Bilingualism and “brain reserve” in subregions of the hippocampal formation

Auteurs: Katharina Peitz, Nora Bittner, Stefan Heim, Svenja Caspers
Publié dans: GeroScience, Numéro 47, 2025, ISSN 2509-2723
Éditeur: Springer Science and Business Media LLC
DOI: 10.1007/S11357-025-01639-0

The predictive nature of spontaneous brain activity across scales and species

Auteurs: Anastasia Dimakou, Giovanni Pezzulo, Andrea Zangrossi, Maurizio Corbetta
Publié dans: Neuron, Numéro 113, 2025, ISSN 0896-6273
Éditeur: Elsevier BV
DOI: 10.1016/J.NEURON.2025.02.009

Multi-scale spiking network model of human cerebral cortex

Auteurs: Jari Pronold, Alexander van Meegen, Renan O Shimoura, Hannah Vollenbröker, Mario Senden, Claus C Hilgetag, Rembrandt Bakker, Sacha J van Albada
Publié dans: Cerebral Cortex, Numéro 34, 2024, ISSN 1047-3211
Éditeur: Oxford University Press (OUP)
DOI: 10.1093/CERCOR/BHAE409

Dynamic causal modelling in probabilistic programming languages

Auteurs: Nina Baldy, Marmaduke Woodman, Viktor K. Jirsa, Meysam Hashemi
Publié dans: Journal of The Royal Society Interface, Numéro 22, 2025, ISSN 1742-5662
Éditeur: The Royal Society
DOI: 10.1098/RSIF.2024.0880

Neurobiology of Disease

Effects of the spatial resolution of the Virtual Epileptic Patient on the identification of epileptogenic networks

Auteurs: Jean-Didier Lemaréchal, Paul Triebkorn, Anirudh Nihalani Vattikonda, Meysam Hashemi, Marmaduke Woodman, Maxime Guye, Fabrice Bartolomei, Huifang E. Wang, Viktor Jirsa
Publié dans: Imaging Neuroscience, Numéro 2, 2024, ISSN 2837-6056
Éditeur: MIT Press
DOI: 10.1162/IMAG_A_00153

Scientific Reports

Auteurs: auf der Heiden, Franca; Axer, Markus; Amunts, Katrin; Menzel, Miriam
Publié dans: Scientific Reports, 2025, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.48550/ARXIV.2412.08499

The virtual multiple sclerosis patient

Auteurs: P. Sorrentino, A. Pathak, A. Ziaeemehr, E. Troisi Lopez, L. Cipriano, A. Romano, M. Sparaco, M. Quarantelli, A. Banerjee, G. Sorrentino, V. Jirsa, M. Hashemi
Publié dans: iScience, Numéro 27, 2024, ISSN 2589-0042
Éditeur: Elsevier BV
DOI: 10.1016/J.ISCI.2024.110101

A map of mitochondrial biology reveals the energy landscape of the human brain

Publié dans: Nature, 2025, ISSN 0028-0836
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/D41586-025-00872-Z

A layered microcircuit model of somatosensory cortex with three interneuron types and cell-type-specific short-term plasticity

Auteurs: Han-Jia Jiang, Guanxiao Qi, Renato Duarte, Dirk Feldmeyer, Sacha J van Albada
Publié dans: Cerebral Cortex, Numéro 34, 2024, ISSN 1047-3211
Éditeur: Oxford University Press (OUP)
DOI: 10.1093/CERCOR/BHAE378

Frontiers in Neuroanatomy

Parameter estimation in a whole-brain network model of epilepsy: Comparison of parallel global optimization solvers

Auteurs: David R. Penas, Meysam Hashemi, Viktor K. Jirsa, Julio R. Banga
Publié dans: PLOS Computational Biology, Numéro 20, 2024, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/JOURNAL.PCBI.1011642

Symmetry breaking organizes the brain’s resting state manifold

Auteurs: Jan Fousek, Giovanni Rabuffo, Kashyap Gudibanda, Hiba Sheheitli, Spase Petkoski, Viktor Jirsa
Publié dans: Scientific Reports, Numéro 14, 2024, ISSN 2045-2322
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41598-024-83542-W

eLife

Auteurs: Zahra Khodadadi; Daniel Trpevski; Robert Lindroos; Jeanette Hellgren Kotaleski
Publié dans: eLife, 2024, ISSN 2050-084X
Éditeur: eLife Sciences Publications
DOI: 10.7554/ELIFE.97274.1

Closing the loop: High-speed robotics with accelerated neuromorphic hardware

Auteurs: Yannik Stradmann, Johannes Schemmel
Publié dans: Frontiers in Neuroscience, Numéro 18, 2024, ISSN 1662-453X
Éditeur: Frontiers Media SA
DOI: 10.3389/FNINS.2024.1360122

Simulating the impact of white matter connectivity on processing time scales using brain network models

Auteurs: Paul Triebkorn, Viktor Jirsa, Peter Ford Dominey
Publié dans: Communications Biology, Numéro 8, 2025, ISSN 2399-3642
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S42003-025-07587-X

The Domains of Monotonicity Processing

Auteurs: I-An Tan, Nir Segal, Yosef Grodzinsky
Publié dans: Journal of Semantics, Numéro 41, 2024, ISSN 0167-5133
Éditeur: Oxford University Press (OUP)
DOI: 10.1093/JOS/FFAE003

On the validity of electric brain signal predictions based on population firing rates

Auteurs: Torbjørn V. Ness, Tom Tetzlaff, Gaute T. Einevoll, David Dahmen
Publié dans: PLOS Computational Biology, Numéro 21, 2025, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/JOURNAL.PCBI.1012303

Virtual brain twins: from basic neuroscience to clinical use

Auteurs: Huifang E Wang, Paul Triebkorn, Martin Breyton, Borana Dollomaja, Jean-Didier Lemarechal, Spase Petkoski, Pierpaolo Sorrentino, Damien Depannemaecker, Meysam Hashemi, Viktor K Jirsa
Publié dans: National Science Review, Numéro 11, 2024, ISSN 2095-5138
Éditeur: Oxford University Press (OUP)
DOI: 10.1093/NSR/NWAE079

Improving data sharing and knowledge transfer via the Neuroelectrophysiology Analysis Ontology (NEAO)

Auteurs: Cristiano A. Köhler; Sonja Grün; Michael Denker
Publié dans: Scientific Data, 2025, ISSN 2052-4463
Éditeur: Cornell University
DOI: 10.48550/ARXIV.2412.05021

Assessing the Similarity of Real Matrices with Arbitrary Shape

Auteurs: Jasper Albers, Anno C. Kurth, Robin Gutzen, Aitor Morales-Gregorio, Michael Denker, Sonja Grün, Sacha J. van Albada, Markus Diesmann
Publié dans: PRX Life, Numéro 3, 2025, ISSN 2835-8279
Éditeur: American Physical Society (APS)
DOI: 10.1103/PRXLIFE.3.023005

The Virtual Parkinsonian patient

Auteurs: Marianna Angiolelli, Damien Depannemaecker, Hasnae Agouram, Jean Régis, Romain Carron, Marmaduke Woodman, Letizia Chiodo, Paul Triebkorn, Abolfazl Ziaeemehr, Meysam Hashemi, Alexandre Eusebio, Viktor Jirsa, Pierpaolo Sorrentino
Publié dans: npj Systems Biology and Applications, Numéro 11, 2025, ISSN 2056-7189
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/S41540-025-00516-Y

Generative Modelling of Cortical Receptor Distributions from Cytoarchitectonic Images in the Macaque Brain

Auteurs: Ahmed Nebli, Christian Schiffer, Meiqi Niu, Nicola Palomero-Gallagher, Katrin Amunts, Timo Dickscheid
Publié dans: Neuroinformatics, Numéro 22, 2024, ISSN 1559-0089
Éditeur: Springer Science and Business Media LLC
DOI: 10.1007/S12021-024-09673-7

Mapping brain lesions to conduction delays: the next step for personalized brain models in Multiple Sclerosis

Auteurs: C. Mazzara; A. Ziaeemehr; E. Lopez Troisi; L. Cipriano; M. Angiolelli; M. Sparaco; M. Quarantelli; C. Granata; G. Sorrentino; M. Hashemi; V. Jirsa; P. Sorrentino
Publié dans: Human Brain Mapping, 2024, ISSN 1097-0193
Éditeur: Wiley Periodicals LLC
DOI: 10.1002/HBM.70219

Scientific Reports

Auteurs: auf der Heiden, Franca; Axer, Markus; Amunts, Katrin; Menzel, Miriam
Publié dans: Scientific Reports, 2025, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.48550/ARXIV.2412.08499

Demonstrating the Advantages of Analog Wafer-Scale Neuromorphic Hardware

Auteurs: Hartmut Schmidt, Andreas Grübl, José Montes, Eric Müller, Sebastian Schmitt, Johannes Schemmel
Publié dans: 2025 Neuro Inspired Computational Elements (NICE), 2025
Éditeur: IEEE
DOI: 10.1109/NICE65350.2025.11065060

jaxsnn: Event-driven Gradient Estimation for Analog Neuromorphic Hardware

Auteurs: Eric Müller, Moritz Althaus, Elias Arnold, Philipp Spilger, Christian Pehle, Johannes Schemmel
Publié dans: 2024 Neuro Inspired Computational Elements Conference (NICE), 2024
Éditeur: IEEE
DOI: 10.1109/NICE61972.2024.10548709

Short-reach Optical Communications: A Real-world Task for Neuromorphic Hardware

Auteurs: Elias Arnold, Eike-Manuel Edelmann, Alexander von Bank, Eric Müller, Laurent Schmalen, Johannes Schemmel
Publié dans: 2025 Neuro Inspired Computational Elements (NICE), 2025
Éditeur: IEEE
DOI: 10.1109/NICE65350.2025.11065780

Contrastive Learning of Cytoarchitecture using Spatial Information

Auteurs: Boztoprak, Zeynep; Dickscheid, Timo; Amunts, Katrin; Schiffer, Christian
Publié dans: doi:10.34734/FZJ-2024-05541, 2024
DOI: 10.34734/FZJ-2024-05541

Analyzing Regional Organization of The Human Hippocampus in 3D-PLI Using Contrastive Learning and Geometric Unfolding

Auteurs: Alexander Oberstrass, Jordan DeKraker, Nicola Palomero-Gallagher, Sascha E. A. Muenzing, Alan C. Evans, Markus Axer, Katrin Amunts, Timo Dickscheid
Publié dans: 2024 IEEE International Symposium on Biomedical Imaging (ISBI), 2024
Éditeur: IEEE
DOI: 10.1109/ISBI56570.2024.10635467

CytoNet: A Deep Neural Network for Whole-brain Characterization of Human Cytoarchitecture

Auteurs: Schiffer, Christian; Boztoprak, Zeynep; Amunts, Katrin; Dickscheid, Timo
Publié dans: doi:10.34734/FZJ-2024-05546, 2024
DOI: 10.34734/FZJ-2024-05546

Integrating programmable plasticity in experiment descriptions for analog neuromorphic hardware

Auteurs: Philipp Spilger, Eric Müller, Johannes Schemmel
Publié dans: 2025 Neuro Inspired Computational Elements (NICE), 2025
Éditeur: IEEE
DOI: 10.1109/NICE65350.2025.11065886

3D reconstruction of BigBrain2: Progress report on semi-automated repairs of histological sections

Auteurs: Lepage, Claude; Mohlberg, Hartmut; Lewis, Lindsay B.; Toussaint, Paule-J.; Wenzel, Susanne; Evans, Alan C.; Amunts, Katrin
Publié dans: doi:10.34734/FZJ-2024-05655, 2024
DOI: 10.34734/FZJ-2024-05655

Multi-timescale synaptic plasticity on analog neuromorphic hardware

Auteurs: Amani Atoui, Jakob Kaiser, Sebastian Billaudelle, Philipp Spilger, Eric Müller, Jannik Luboeinski, Christian Tetzlaff, Johannes Schemmel
Publié dans: 2025 Neuro Inspired Computational Elements (NICE), 2025
Éditeur: IEEE
DOI: 10.1109/NICE65350.2025.11065914

Automatic Characterization of Fiber Architecture in 3D-PLI Using Contrastive Learning

Auteurs: Oberstraß, Alexander; Schiffer, Christian; Axer, Markus; Amunts, Katrin; Dickscheid, Timo
Publié dans: Helmholtz AI Conference 2024, HAICON24, Düsseldorf, Germany, 2024-06-12 - 2024-06-14, 2024
DOI: 10.34734/FZJ-2024-05545

MIP: Advanced Data Processing and Analytics for Science and Medicine

Auteurs: Kostas Filippopolitis, Yannis Foufoulas, Minos Garofalakis, Apostolos Glenis, Yannis Ioannidis, Thanasis-Michail Karampatsis, Maria-Olympia Katsouli, Evdokia Mailli, Asimakis Papageorgiou-Mariglis, Giorgos Papanikos, George Pikramenos, Jason Sakellariou,
Publié dans: Advances in Database Technology - Volume 27 Proceedings 27th International Conference on Extending Database Technology ( EDBT 2024 ) Paestum, Italy, March 25 - March 28, 2024
Éditeur: Open proceedings
DOI: 10.48786/EDBT.2024.74

Virtual Brain Twins in EBRAINS

Auteurs: Jirsa, viktor; Meysam, Hashemi; Wang, Huifang; Woodman, Marmaduke; Triebkorn, Paul; Dollomaja, Borana; Runfola, Claudio; Depannemaecker, Damien; Breyton, Martin; Sorrentino, Pierpaolo; Klijn, Wouter; Petkoski, Spase
Publié dans: doi:10.34734/FZJ-2024-05114, 2024
DOI: 10.34734/FZJ-2024-05114

Lecture Notes in Computer Science

Auteurs: Robin Dietrich, Philipp Spilger, Eric Müller, Johannes Schemmel, Alois C. Knoll
Publié dans: Lecture Notes in Computer Science, Machine Learning, Optimization, and Data Science, 2025, ISSN 0302-9743
Éditeur: Springer Verlag
DOI: 10.1007/978-3-031-82487-6_15

Human brain anatomy and atlases

Auteurs: Katrin Amunts, Daniel Zachlod
Publié dans: Encyclopedia of the Human Brain, 2025
Éditeur: Elsevier
DOI: 10.1016/B978-0-12-820480-1.00187-X

Compressed representation of brain genetic transcription

Auteurs: James K. Ruffle; Henry Watkins; Robert J. Gray; Harpreet Hyare; Michel Thiebaut de Schotten; Parashkev Nachev
Publié dans: Human Brain Mapping, 2024
DOI: 10.48550/ARXIV.2310.16113

The Virtual Parkinsonian Patient

Auteurs: Marianna Angiolelli; Damien Depannemaecker; Hasnae Agouram; Jean Ŕegis; Romain Carron; Marmaduke Woodman; Letizia Chiodo; Paul Triebkorn; Abolfazl Ziaeemehr; Meysam Hashemi; Alexandre Eusebio; Viktor Jirsa; Pierpaolo Sorrentino
Publié dans: npj Systems Biology and Applications, 2024
DOI: 10.1038/S41540-025-00516-Y

Bachelor thesis: Runtime-dynamic reconfiguration for a time-continuous neuromorphic system

Auteurs: Tim Auberer
Publié dans: 2024

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