Objective
More than 99% of the microbial diversity on earth still resists cultivation. To exploit this nearly inexhaustible natural resource of new genes and functions direct cloning and sequencing of large DNA fragments from the environment (the metagenome) is the ongoing goal of many researchers worldwide. Nevertheless, more than 50 to 70% of the genes currently found on the genomes and metagenomes lack functional assignments, representing so called hypothetical genes. This shortcoming will be addressed by our new integrative approach that correlates possible gene functions by taking into account habitat specific data and global patterns of gene distribution. First approaches to map biodiversity of cultivated microorganisms and correlate it with ecological and geogr aphical data have already been published, but without genomic data. Independently, the existence of clusters of genes across genomes is documented. No methodology or database integrates these two kinds of information in a single concept at this time. There fore the time is ripe to develop a new integrative system combining genomic and ecological data by using Geographic Information Systems (GIS) in a "Metagenomes Mapserver". The project will result in a new basic technology to systematically store, analyse, visualize and evaluate ecological, geographical and genomic data together. A proof of usefulness will already be given in the proposed project, as data on the carbon and sulfur-cycles will be linked with genomic data from specific sites to predict gene pat terns with potential functions involved in these globally important processes. This proposal is ideally suited for the high risk/high impact NEST program as it cuts across several scientific disciplines and only a few institutes worldwide can develop such a system (high risk). Once it has been installed and its usefulness proven, new areas of scientific development in data mining for environmental monitoring and biotechnology will be possible (high impact)
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences earth and related environmental sciences physical geography cartography geographic information systems
- natural sciences biological sciences genetics DNA
- natural sciences computer and information sciences data science data mining
- natural sciences biological sciences ecology ecosystems
- natural sciences biological sciences genetics genomes
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Keywords
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Project’s keywords as indicated by the project coordinator. Not to be confused with the EuroSciVoc taxonomy (Fields of science)
Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP6-2003-NEST-A
See other projects for this call
Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Coordinator
MUENCHEN
Germany
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.