Objective
To understand how molecular machines execute their function, a multidisciplinary approach combining structural biology with biochemical and computational studies is required. In this project, I will couple these three methodologies to understand the dynamic interactions and regulatory mechanisms of the 26S proteasome by cryo-EM single particle analysis.
Recent work from our lab and others resulted in a pseudo-atomic structure of the 26S proteasome. At the same time, cryo-EM technology has been revolutionized by automated data acquisition schemes and new electron detectors, which empower us to explore dynamic structures at high resolution. Thus, now we can not only “watch” conformational changes in macromolecules as they perform their function, but also structurally analyze their transient interactions. In the case of the 26S proteasome, binding of both proteasome interacting proteins (PIPs) and ubiquitylated substrates is crucial for proteasome assembly and function, but how these interactions occur remains poorly understood.
The major goals of this proposal will be to 1) understand the functional and structural interactions of the proteasome and various PIPs, and 2) how the proteasome recognizes different ubiquitylated substrates through different ubiquitin receptors. These results will contribute not only to the general understanding of proteasome regulation, but also to deciphering the code of ubiquitin signaling employed in various cellular pathways, thus impacting different areas of biochemistry, molecular biology and cell biology. Furthermore, this will be the first systematic exploration of a structural “interactome”, which may pave the way for further studies on other macromolecules. Finally, given the role of the proteasome in numerous human diseases, a detailed knowledge of the molecular mechanisms for its regulation can also have significant biomedical relevance and may lead the development of novel, more specific drugs targeting the 26S proteasome.
Fields of science (EuroSciVoc)
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
CORDIS classifies projects with EuroSciVoc, a multilingual taxonomy of fields of science, through a semi-automatic process based on NLP techniques. See: The European Science Vocabulary.
- natural sciences biological sciences biochemistry biomolecules proteins
- natural sciences biological sciences cell biology
- natural sciences biological sciences molecular biology structural biology
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Programme(s)
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Multi-annual funding programmes that define the EU’s priorities for research and innovation.
Topic(s)
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.
Call for proposal
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.
FP7-PEOPLE-2013-CIG
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Funding Scheme
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.
MC-CIG - Support for training and career development of researcher (CIG)
Coordinator
80539 MUNCHEN
Germany
The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.