Small RNA regulation of the body plan and epigenome in Arabidopsis embryos

Project Information

sRNA-EMB

Grant agreement ID: 637888

DOI

10.3030/637888

Project closed

EC signature date 20 June 2015

Start date 1 July 2015

End date 30 June 2020

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 1 499 988,99

EU contribution

€ 1 499 988,99

Coordinated by

GREGOR MENDEL INSTITUT FUR MOLEKULARE PFLANZENBIOLOGIE GMBH
Austria

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (6)

Novel small RNA spike-in oligonucleotides enable absolute normalization of small RNA-Seq data

Author(s): Stefan Lutzmayer, Balaji Enugutti, Michael D. Nodine
Published in: Scientific Reports, Issue 7/1, 2017, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-017-06174-3

Widespread Contamination of Arabidopsis Embryo and Endosperm Transcriptome Data Sets

Author(s): Michael A. Schon, Michael D. Nodine
Published in: The Plant Cell, Issue 29/4, 2017, Page(s) 608-617, ISSN 1040-4651
Publisher: American Society of Plant Biologists
DOI: 10.1105/tpc.16.00845

MicroRNA Dynamics and Functions During Arabidopsis Embryogenesis

Author(s): Alexandra Plotnikova, Max J. Kellner, Michael A. Schon, Magdalena Mosiolek, Michael D. Nodine
Published in: The Plant Cell, Issue 31/12, 2019, Page(s) 2929-2946, ISSN 1040-4651
Publisher: American Society of Plant Biologists
DOI: 10.1105/tpc.19.00395

NanoPARE: parallel analysis of RNA 5′ ends from low-input RNA

Author(s): Michael A. Schon, Max J. Kellner, Alexandra Plotnikova, Falko Hofmann, Michael D. Nodine
Published in: Genome Research, Issue 28/12, 2018, Page(s) 1931-1942, ISSN 1088-9051
Publisher: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.239202.118

The embryonic transcriptome of Arabidopsis thaliana

Author(s): Falko Hofmann, Michael A. Schon, Michael D. Nodine
Published in: Plant Reproduction, Issue 32/1, 2019, Page(s) 77-91, ISSN 2194-7953
Publisher: Springer Verlag
DOI: 10.1007/s00497-018-00357-2

Chromatin regulates expression of small RNAs to help maintain transposon methylome homeostasis in Arabidopsis

Author(s): Ranjith K. Papareddy, Katalin Páldi, Subramanian Paulraj, Ping Kao, Stefan Lutzmayer, Michael D. Nodine
Published in: Genome Biology, Issue 21, 2020, Page(s) 1-24, ISSN 1474-760X
Publisher: Springer Nature
DOI: 10.1186/s13059-020-02163-4

Book chapters (1)

Small RNA In Situ Hybridizations on Sections of Arabidopsis Embryos

Author(s): Katalin Páldi, Magdalena Mosiolek, Michael D. Nodine
Published in: Plant Embryogenesis - Methods and Protocols, Issue 2122, 2020, Page(s) 87-99, ISBN 978-1-0716-0341-3
Publisher: Springer US
DOI: 10.1007/978-1-0716-0342-0_7