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Protein design from sub-domain sized fragments

Publicaciones

The Stability Landscape of de novo TIM Barrels Explored by a Modular Design Approach

Autores: Sergio Romero-Romero, Miguel Costas, Daniel-Adriano Silva Manzano, Sina Kordes, Erendira Rojas-Ortega, Cinthya Tapia, Yasel Guerra, Sooruban Shanmugaratnam, Adela Rodríguez-Romero, David Baker, Birte Höcker, D. Alejandro Fernández-Velasco
Publicado en: Journal of Molecular Biology, Issue 433/18, 2021, Page(s) 167153, ISSN 0022-2836
Editor: Academic Press
DOI: 10.1016/j.jmb.2021.167153

ProteinTools: a toolkit to analyze protein structures

Autores: Noelia Ferruz, Steffen Schmidt, Birte Höcker
Publicado en: Nucleic Acids Research, Issue 49/W1, 2021, Page(s) W559-W566, ISSN 0305-1048
Editor: Oxford University Press
DOI: 10.1093/nar/gkab375

Strategies for designing non-natural enzymes and binders

Autores: Horst Lechner, Noelia Ferruz, Birte Höcker
Publicado en: Current Opinion in Chemical Biology, Issue 47, 2018, Page(s) 67-76, ISSN 1367-5931
Editor: Elsevier BV
DOI: 10.1016/j.cbpa.2018.07.022

Reconstructing the Remote Origins of a Fold Singleton from a Flavodoxin-Like Ancestor

Autores: Saacnicteh Toledo-Patiño, Manish Chaubey, Murray Coles, Birte Höcker
Publicado en: Biochemistry, Issue 58/48, 2019, Page(s) 4790-4793, ISSN 0006-2960
Editor: American Chemical Society
DOI: 10.1021/acs.biochem.9b00900

Identification and Analysis of Natural Building Blocks for Evolution-Guided Fragment-Based Protein Design

Autores: Noelia Ferruz, Francisco Lobos, Dominik Lemm, Saacnicteh Toledo-Patino, José Arcadio Farías-Rico, Steffen Schmidt, Birte Höcker
Publicado en: Journal of Molecular Biology, 2020, ISSN 0022-2836
Editor: Academic Press
DOI: 10.1016/j.jmb.2020.04.013

Fuzzle 2.0: Ligand Binding in Natural Protein Building Blocks

Autores: Noelia Ferruz, Florian Michel, Francisco Lobos, Steffen Schmidt, Birte Höcker
Publicado en: Frontiers in Molecular Biosciences, Issue 8, 2021, ISSN 2296-889X
Editor: Frontiers Media S.A..
DOI: 10.3389/fmolb.2021.715972

Evolution, folding, and design of TIM barrels and related proteins

Autores: Sergio Romero-Romero, Sina Kordes, Florian Michel, Birte Höcker
Publicado en: Current Opinion in Structural Biology, Issue 68, 2021, Page(s) 94-104, ISSN 0959-440X
Editor: Elsevier BV
DOI: 10.1016/j.sbi.2020.12.007

Protlego: A Python package for the analysis and design of chimeric proteins

Autores: Noelia Ferruz; Jakob Noske; Birte Hoecker
Publicado en: Bioinformatics, 2021, ISSN 1367-4803
Editor: Oxford University Press
DOI: 10.1101/2020.10.04.325555

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