CEREALPATH - Training in innovative and integrated control of cereal diseases | CEREALPATH | Project | Results | H2020 | CORDIS

Livrables

Identification of new endophytes that show potential for disease control
Workshop 3 - Biologicals and bioactives for disease control

Training in knowledge of different biological and other alternative agents that can control diseases (month 17); Knowledge on the cutting edge literature on biological control and bioactives in relation to cereal pathology (month 17 and afterwards through the online journal club); Improved network with experts in the field (month 17).

Progress report submitted to REA

Progress report submitted to REA Other internal network reports: inception report (M4), annual progress report (M12,M24,36), and final report (M48)

Elucidation of the effect of host genotype on endophyte efficacy for disease control
Determination of the complementarity of endophytes and bioactive silicon
Determination of the potential of RNAi for broad spectrum disease control
Draft periodic report

Draft periodic report (for the purpose of the mid term review meeting)

Publications and outreach

Publications and outreach (from month 12 to 52)

Website, social media setup

Website and social media set up

Symposia- annual UCD-based symposia and a final symposium in BOKU on “Advances in cereal disease control”

Annual symposia (months 16, 28, 38)

Determination of the potential of manipulating RNAi for disease control via wheat breeding

Publications

Editorial: Plant Disease Management in the Post-genomic Era: From Functional Genomics to Genome Editing.

Auteurs: Sabrina Sarrocco; Alfredo Herrera-Estrella; David B. Collinge
Publié dans: Sarrocco , S , Herrera-estrella , A & Collinge , D B 2020 , ' Plant Disease Management in the Post-genomic Era : From Functional Genomics to Genome Editing ' , Frontiers in Microbiology , vol. 11 , 107 , pp. 1-2 . https://doi.org/10.3389/fmicb.2020.00107, Numéro 18, 2020, Page(s) 107, ISSN 1664-462X
Éditeur: Frontiers Media S. A.
DOI: 10.3389/fmicb.2020.00107

Cross-kingdom RNA trafficking and environmental RNAi — nature's blueprint for modern crop protection strategies

Auteurs: Cai, Qiang; He, Baoye; Kogel, Karl-Heinz; Jin, Hailing
Publié dans: Current Opinion in Microbiology, Numéro 7, 2018, ISSN 1369-5274
Éditeur: Elsevier BV
DOI: 10.1016/j.mib.2018.02.003

Identification of two endophytic fungi that control Septoria tritici blotch in the field, using a structured screening approach

Auteurs: Meike A.C. Latz, Birgit Jensen, David B. Collinge, Hans Jørgen Lyngs Jørgensen
Publié dans: Biological Control, Numéro 141, 2020, Page(s) 104128, ISSN 1049-9644
Éditeur: Academic Press
DOI: 10.1016/j.biocontrol.2019.104128

Fusarium Head Blight Modifies Fungal Endophytic Communities During Infection of Wheat Spikes

Auteurs: Edward C. Rojas, Rumakanta Sapkota, Birgit Jensen, Hans J. L. Jørgensen, Tina Henriksson, Lise Nistrup Jørgensen, Mogens Nicolaisen, David B. Collinge
Publié dans: Microbial Ecology, 2019, ISSN 0095-3628
Éditeur: Springer Verlag
DOI: 10.1007/s00248-019-01426-3

Further Elucidation of the Argonaute and Dicer Protein Families in the Model Grass Species Brachypodium distachyon

Auteurs: Ena Šečić, Silvia Zanini, Karl-Heinz Kogel
Publié dans: Frontiers in Plant Science, Numéro 10, 2019, ISSN 1664-462X
Éditeur: Frontiers Media S. A.
DOI: 10.3389/fpls.2019.01332

A Bioinformatics Pipeline for the Analysis and Target Prediction of RNA Effectors in Bidirectional Communication During Plant–Microbe Interactions

Auteurs: Silvia Zanini, Ena Šečić, Lukas Jelonek, Karl-Heinz Kogel
Publié dans: Frontiers in Plant Science, Numéro 9, 2018, ISSN 1664-462X
Éditeur: Frontiers Media S. A.
DOI: 10.3389/fpls.2018.01212

Association mapping of wheat Fusarium head blight resistance-related regions using a candidate-gene approach and their verification in a biparental population

Auteurs: Karolina Maria Słomińska-Durdasiak, Sonja Kollers, Viktor Korzun, Daniela Nowara, Patrick Schweizer, Armin Djamei, Jochen Christoph Reif
Publié dans: Theoretical and Applied Genetics, 2019, ISSN 0040-5752
Éditeur: Springer Verlag
DOI: 10.1007/s00122-019-03463-5

Endophytic fungi as biocontrol agents: elucidating mechanisms in disease suppression

Auteurs: Meike A.C. Latz, Birgit Jensen, David B. Collinge, Hans J.L. Jørgensen
Publié dans: Plant Ecology & Diversity, Numéro 11/5-6, 2018, Page(s) 555-567, ISSN 1755-0874
Éditeur: Taylor & Francis
DOI: 10.1080/17550874.2018.1534146

Hidden Fungi: Combining Culture-Dependent and -Independent DNA Barcoding Reveals Inter-Plant Variation in Species Richness of Endophytic Root Fungi in Elymus repens

Auteurs: Anna K. Høyer; Trevor R. Hodkinson
Publié dans: Numéro 6, Numéro 4, 2021, ISSN 2309-608X
Éditeur: MDPI
DOI: 10.3390/jof7060466

Characterization of the volatilome of Lysobacter capsici AZ78 and its bioactivity against soilborne plant pathogenic fungi and oomycetes

Auteurs: Vlassi, A.; Puopolo, G.; Perazzolli, M.; Nesler, A.; Parich, A.; Schuhmacher, R.
Publié dans: BOKU University PhD conference IFA-TULLN, Numéro 17, 2018
Éditeur: BOKU University

Zurich-Basel Plant Science Center: PSC Summer Schools 2014 and 2016, Agriculture in transformation – Concepts for agriculture production systems that are socially fair, environmentally safe and economically viable

Auteurs: Paschke; Melanie (Ed) Kangara; N.; Marchal; C.; Ndougonna C.; and Słomińska-Durdasiak K Kolodziej; M.C.; Karki; S.J.; Malla K.B.; and Zanini; S. Soto; M.; Santos; M.; Reyhanloo; T.; and Drakopoulos; D. Hoeyer; A.J.; Ramoneda; J.; Merz; Q.; and Welker; L Deshaies; M; Gimeno; A.; Rahn; E.; and Rojas; E.C.
Publié dans: Agriculture in transformation – Concepts for agriculture production systems that are socially fair, environmentally safe and economically viable, Numéro 4, 2017
Éditeur: ETH Library

Auteurs: Paschke, Melanie (Ed) Kangara, N., Marchal, C., Ndougonna C., and Słomińska-Durdasiak K Kolodziej, M.C., Karki, S.J., Malla K.B., and Zanini, S. Soto, M., Santos, M., Reyhanloo, T., and Drakopoulos, D. Hoeyer, A.J., Ramoneda, J., Merz, Q., and Welker, L Deshaies, M, Gimeno, A., Rahn, E., and Rojas, E.C.
Publié dans: 2017
Éditeur: Idea Verlag
DOI: 10.3929/ethz-b-000218321

Fusarium diseases: biology and management perspectives

Auteurs: Edward C. Rojas, Hans J. L. Jørgensen, Birgit Jensen, David B. Collinge
Publié dans: Integrated disease management of wheat and barley, 2018, Page(s) 23-45, ISBN 9781-786762160
Éditeur: Burleigh Dodds Science Publishing
DOI: 10.19103/as.2018.0039.02

Searching for Novel Fungal Biological Control Agents for Plant Disease Control Among Endophytes

Auteurs: David B. Collinge, Hans J. L. Jørgensen, Meike A. C. Latz, Andrea Manzotti, Fani Ntana, Edward C. Rojas, Birgit Jensen
Publié dans: Endophytes for a Growing World, 2019, Page(s) 25-51, ISBN 9781-108607667
Éditeur: Cambridge University Press
DOI: 10.1017/9781108607667.003

Emerging Methods for Biological Control of Barley Diseases Including the Role of Endophytes

Auteurs: Anna K. Høyer, Hans J. L. Jørgensen, Birgit Jensen, Brian R. Murphy, Trevor R. Hodkinson
Publié dans: Endophytes for a Growing World, 2019, Page(s) 93-119, ISBN 9781-108607667
Éditeur: Cambridge University Press
DOI: 10.1017/9781108607667.006

Discovery of interaction-related sRNAs and their targets in the Brachypodium distachyon and Magnaporthe oryzae pathosystem

Auteurs: Silvia Zanini, Ena Šečić, Tobias Busche, Jörn Kalinowski, Karl-Heinz Kogel
Publié dans: 2019
Éditeur: bioRxiv, Cold Spring Harbor Laboratory,
DOI: 10.1101/631945

K-PIE: using K-means algorithm for Percentage Infection symptoms Estimation

Auteurs: Vanessa Bueno-Sancho; Pilar Corredor-Moreno; Ngonidzashe Kangara; Diane G.O. Saunders
Publié dans: 2019
Éditeur: Zenodo
DOI: 10.5281/zenodo.3584148

Isolation and characterisation of novel fungal root endophytes from Elymus repens (Poaceae) for resistance to Fusarium, Gaeummanomyces and Pyrenophora

Auteurs: HØYER, ANNA KAJA
Publié dans: 2019
Éditeur: Trinity College Dublin

Identification and characterisation of effector proteins from Zymoseptoria tritici

Auteurs: Sujit Jung Karki
Publié dans: 2019
Éditeur: University College Dublin

Characterisation of genes involved in the wheat response to Fusarium head blight disease

Auteurs: Malla, Keshav Bahadur
Publié dans: 2019
Éditeur: University College Dublin

Endophytic fungi in wheat : plant-microbe interactions from molecular to community scale

Auteurs: Meike Latz
Publié dans: 2019
Éditeur: University of Copenhagen

Fungal Endophytes as Novel Biocontrol Agents of Fusarium Head Blight in Wheat

Auteurs: ROJAS, EDWARD C,
Publié dans: 2019
Éditeur: University of Copenhagen

Investigating the potential of biologically derived agents to reduce the effects of stress in wheat

Auteurs: Myriam Deshaies
Publié dans: 2019
Éditeur: University College Dublin

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CEREALPATH - Training in innovative and integrated control of cereal diseases

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