European Network linking informatics and genomics of helper T cells

Autores: Verena Brucklacher-Waldert, Cristina Ferreira, Marisa Stebegg, Olivier Fesneau, Silvia Innocentin, Julien C. Marie, Marc Veldhoen
Publicado en: Cell Reports, Edición 19/11, 2017, Página(s) 2357-2370, ISSN 2211-1247
Editor: Cell Press
DOI: 10.1016/j.celrep.2017.05.052

ROTS: An R package for reproducibility-optimized statistical testing

Autores: Tomi Suomi, Fatemeh Seyednasrollah, Maria K. Jaakkola, Thomas Faux, Laura L. Elo
Publicado en: PLOS Computational Biology, Edición 13/5, 2017, Página(s) e1005562, ISSN 1553-7358
Editor: Public Library of Science
DOI: 10.1371/journal.pcbi.1005562

Follicular T Helper Cells: A New Marker of Type 1 Diabetes Risk?

Autores: Frank Heuts, Natalie M. Edner, Lucy S.K. Walker
Publicado en: Diabetes, Edición 66/2, 2017, Página(s) 258-260, ISSN 0012-1797
Editor: American Diabetes Association
DOI: 10.2337/dbi16-0062

Regulation of the Germinal Center Response

Autores: Marisa Stebegg, Saumya D. Kumar, Alyssa Silva-Cayetano, Valter R. Fonseca, Michelle A. Linterman, Luis Graca
Publicado en: Frontiers in Immunology, Edición 9, 2018, ISSN 1664-3224
Editor: Frontiers Media SA
DOI: 10.3389/fimmu.2018.02469

Single-Cell Transcriptomics of Regulatory T Cells Reveals Trajectories of Tissue Adaptation

Autores: Ricardo J. Miragaia, Tomás Gomes, Agnieszka Chomka, Laura Jardine, Angela Riedel, Ahmed N. Hegazy, Natasha Whibley, Andrea Tucci, Xi Chen, Ida Lindeman, Guy Emerton, Thomas Krausgruber, Jacqueline Shields, Muzlifah Haniffa, Fiona Powrie, Sarah A. Teichmann
Publicado en: Immunity, Edición 50/2, 2019, Página(s) 493-504.e7, ISSN 1074-7613
Editor: Cell Press
DOI: 10.1016/j.immuni.2019.01.001

Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation

Autores: Jhuma Pramanik, Xi Chen, Gozde Kar, Johan Henriksson, Tomás Gomes, Jong-Eun Park, Kedar Natarajan, Kerstin B. Meyer, Zhichao Miao, Andrew N. J. McKenzie, Bidesh Mahata, Sarah A. Teichmann
Publicado en: Genome Medicine, Edición 10/1, 2018, ISSN 1756-994X
Editor: BioMed Central
DOI: 10.1186/s13073-018-0589-3

Genome-wide CRISPR Screens in T Helper Cells Reveal Pervasive Crosstalk between Activation and Differentiation

Autores: Johan Henriksson, Xi Chen, Tomás Gomes, Ubaid Ullah, Kerstin B. Meyer, Ricardo Miragaia, Graham Duddy, Jhuma Pramanik, Kosuke Yusa, Riitta Lahesmaa, Sarah A. Teichmann
Publicado en: Cell, Edición 176/4, 2019, Página(s) 882-896.e18, ISSN 0092-8674
Editor: Cell Press
DOI: 10.1016/j.cell.2018.11.044

CTLA-4–mediated transendocytosis of costimulatory molecules primarily targets migratory dendritic cells

Autores: Vitalijs Ovcinnikovs, Ellen M. Ross, Lina Petersone, Natalie M. Edner, Frank Heuts, Elisavet Ntavli, Alexandros Kogimtzis, Alan Kennedy, Chun Jing Wang, Clare L. Bennett, David M. Sansom, Lucy S. K. Walker
Publicado en: Science Immunology, Edición 4/35, 2019, Página(s) eaaw0902, ISSN 2470-9468
Editor: AAAS
DOI: 10.1126/sciimmunol.aaw0902

T Cell/B Cell Collaboration and Autoimmunity: An Intimate Relationship

Autores: Lina Petersone, Natalie M. Edner, Vitalijs Ovcinnikovs, Frank Heuts, Ellen M. Ross, Elisavet Ntavli, Chun J. Wang, Lucy S. K. Walker
Publicado en: Frontiers in Immunology, Edición 9, 2018, ISSN 1664-3224
Editor: Frontiers Media SA
DOI: 10.3389/fimmu.2018.01941

Heterochronic faecal transplantation boosts gut germinal centres in aged mice

Autores: Marisa Stebegg, Alyssa Silva-Cayetano, Silvia Innocentin, Timothy P. Jenkins, Cinzia Cantacessi, Colin Gilbert, Michelle A. Linterman
Publicado en: Nature Communications, Edición 10/1, 2019, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-019-10430-7

RepViz: a replicate-driven R tool for visualizing genomic regions

Autores: Thomas Faux, Kalle T. Rytkönen, Asta Laiho, Laura L. Elo
Publicado en: BMC Research Notes, Edición 12/1, 2019, ISSN 1756-0500
Editor: BioMed Central
DOI: 10.1186/s13104-019-4473-z

Molecular Markers Distinguishing T Cell Subtypes With TSDR Strand-Bias Methylation

Autores: Ekaterina Minskaia, Barbara C. Saraiva, Maria M. V. Soares, Rita I. Azevedo, Ruy M. Ribeiro, Saumya D. Kumar, Ana I. S. Vieira, João F. Lacerda
Publicado en: Frontiers in Immunology, Edición 9, 2018, ISSN 1664-3224
Editor: Frontiers Media SA
DOI: 10.3389/fimmu.2018.02540

Immune Cell Dynamics Unfolded by Single-Cell Technologies

Autores: Daniel J. Kunz, Tomás Gomes, Kylie R. James
Publicado en: Frontiers in Immunology, Edición 9, 2018, ISSN 1664-3224
Editor: Frontiers Media SA
DOI: 10.3389/fimmu.2018.01435

Immunology Driven by Large-Scale Single-Cell Sequencing

Autores: Tomás Gomes, Sarah A. Teichmann, Carlos Talavera-López
Publicado en: Trends in Immunology, Edición 40/11, 2019, Página(s) 1011-1021, ISSN 1471-4906
Editor: Elsevier BV
DOI: 10.1016/j.it.2019.09.004

Re-evaluation of human BDCA-2+ DC during acute sterile skin inflammation

Autores: Yi-Ling Chen, Tomas Gomes, Clare S. Hardman, Felipe A. Vieira Braga, Danuta Gutowska-Owsiak, Maryam Salimi, Nicki Gray, David A. Duncan, Gary Reynolds, David Johnson, Mariolina Salio, Vincenzo Cerundolo, Jillian L. Barlow, Andrew N.J. McKenzie, Sarah A. Teichmann, Muzlifah Haniffa, Graham Ogg
Publicado en: The Journal of Experimental Medicine, Edición 217/3, 2020, ISSN 0022-1007
Editor: Rockefeller University Press
DOI: 10.1084/jem.20190811

Metabolic pathways in T cell activation and lineage differentiation

Autores: Luís Almeida, Matthias Lochner, Luciana Berod, Tim Sparwasser
Publicado en: Seminars in Immunology, Edición 28/5, 2016, Página(s) 514-524, ISSN 1044-5323
Editor: Academic Press
DOI: 10.1016/j.smim.2016.10.009

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