Transposable elements, their controllers and the genesis of human-specific transcriptional networks

Publicaciones

Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons

Autores: Priscilla Turelli, Christopher Playfoot, Dephine Grun, Charlène Raclot, Julien Pontis, Alexandre Coudray, Christian Thorball, Julien Duc, Eugenia V. Pankevich, Bart Deplancke, Volker Busskamp, Didier Trono
Publicado en: Science Advances, Edición 6/35, 2020, Página(s) eaba3200, ISSN 2375-2548
Editor: Science Advances
DOI: 10.1126/sciadv.aba3200

KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage

Autores: Gernot Wolf, Alberto de Iaco, Ming-An Sun, Melania Bruno, Matthew Tinkham, Don Hoang, Apratim Mitra, Sherry Ralls, Didier Trono, Todd S Macfarlan
Publicado en: eLife, Edición 9, 2020, ISSN 2050-084X
Editor: eLife Sciences Publications
DOI: 10.7554/elife.56337

A Dissection of Oligomerization by the TRIM28 Tripartite Motif and the Interaction with Members of the Krab-ZFP Family

Autores: Yunyuan Sun, Jeremy R. Keown, Moyra M. Black, Charlène Raclot, Nicholas Demarais, Didier Trono, Priscilla Turelli, David C. Goldstone
Publicado en: Journal of Molecular Biology, Edición 431/14, 2019, Página(s) 2511-2527, ISSN 0022-2836
Editor: Academic Press
DOI: 10.1016/j.jmb.2019.05.002

Transposable elements and their KZFP controllers are drivers of transcriptional innovation in the developing human brain

Autores: Christopher Playfoot; Julien Duc; Shaoline Sheppard; Sagane Dind; Alexandre Coudray; Evarist Planet; Didier Trono
Publicado en: Genome Research, Edición 9, 2021, Página(s) 1531-1545, ISSN 1088-9051
Editor: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gr.275133.120

The mouse genome displays highly dynamic populations of KRAB-zinc finger protein genes and related genetic units

Autores: Annamaria Kauzlaric, Gabriela Ecco, Marco Cassano, Julien Duc, Michael Imbeault, Didier Trono
Publicado en: PLOS ONE, Edición 12/3, 2017, Página(s) e0173746, ISSN 1932-6203
Editor: Public Library of Science
DOI: 10.1371/journal.pone.0173746

DUX-family transcription factors regulate zygotic genome activation in placental mammals

Autores: Alberto De Iaco, Evarist Planet, Andrea Coluccio, Sonia Verp, Julien Duc, Didier Trono
Publicado en: Nature Genetics, Edición 49/6, 2017, Página(s) 941-945, ISSN 1061-4036
Editor: Nature Publishing Group
DOI: 10.1038/ng.3858

Polyphenic trait promotes liver cancer in a model of epigenetic instability in mice

Autores: Marco Cassano, Sandra Offner, Evarist Planet, Alessandra Piersigilli, Suk Min Jang, Hugues Henry, Markus B. Geuking, Catherine Mooser, Kathy D. McCoy, Andrew J. Macpherson, Didier Trono
Publicado en: Hepatology, Edición 66/1, 2017, Página(s) 235-251, ISSN 0270-9139
Editor: John Wiley & Sons Inc.
DOI: 10.1002/hep.29182

Individual retrotransposon integrants are differentially controlled by KZFP/KAP1-dependent histone methylation, DNA methylation and TET-mediated hydroxymethylation in naïve embryonic stem cells

Autores: Andrea Coluccio, Gabriela Ecco, Julien Duc, Sandra Offner, Priscilla Turelli, Didier Trono
Publicado en: Epigenetics & Chromatin, Edición 11/1, 2018, ISSN 1756-8935
Editor: BioMed Central
DOI: 10.1186/s13072-018-0177-1

KRAB zinc finger proteins

Autores: Gabriela Ecco, Michael Imbeault, Didier Trono
Publicado en: Development, Edición 144/15, 2017, Página(s) 2719-2729, ISSN 0950-1991
Editor: The Company of Biologists Ltd.
DOI: 10.1242/dev.132605

KAP1 facilitates reinstatement of heterochromatin after DNA replication

Autores: Suk Min Jang, Annamaria Kauzlaric, Jean-Pierre Quivy, Julien Pontis, Benjamin Rauwel, Andrea Coluccio, Sandra Offner, Julien Duc, Priscilla Turelli, Geneviève Almouzni, Didier Trono
Publicado en: Nucleic Acids Research, 2018, ISSN 0305-1048
Editor: Oxford University Press
DOI: 10.1093/nar/gky580

ZNF445 is a primary regulator of genomic imprinting

Autores: Nozomi Takahashi, Andrea Coluccio, Christian W. Thorball, Evarist Planet, Hui Shi, Sandra Offner, Priscilla Turelli, Michael Imbeault, Anne C. Ferguson-Smith, Didier Trono
Publicado en: Genes & Development, Edición 33/1-2, 2019, Página(s) 49-54, ISSN 0890-9369
Editor: Cold Spring Harbor Laboratory Press
DOI: 10.1101/gad.320069.118

The interactome of KRAB zinc finger proteins reveals the evolutionary history of their functional diversification

Autores: Pierre‐Yves Helleboid, Moritz Heusel, Julien Duc, Cécile Piot, Christian W Thorball, Andrea Coluccio, Julien Pontis, Michaël Imbeault, Priscilla Turelli, Ruedi Aebersold, Didier Trono
Publicado en: The EMBO Journal, 2019, ISSN 0261-4189
Editor: Nature Publishing Group
DOI: 10.15252/embj.2018101220

DPPA2 and DPPA4 are necessary to establish a 2C‐like state in mouse embryonic stem cells

Autores: Alberto De Iaco, Alexandre Coudray, Julien Duc, Didier Trono
Publicado en: EMBO reports, Edición 20/5, 2019, ISSN 1469-221X
Editor: Nature Publishing Group
DOI: 10.15252/embr.201847382

Hominoid-Specific Transposable Elements and KZFPs Facilitate Human Embryonic Genome Activation and Control Transcription in Naive Human ESCs

Autores: Julien Pontis, Evarist Planet, Sandra Offner, Priscilla Turelli, Julien Duc, Alexandre Coudray, Thorold W. Theunissen, Rudolf Jaenisch, Didier Trono
Publicado en: Cell Stem Cell, Edición 24/5, 2019, Página(s) 724-735.e5, ISSN 1934-5909
Editor: Cell Press
DOI: 10.1016/j.stem.2019.03.012

DUX is a non-essential synchronizer of zygotic genome activation

Autores: Alberto De Iaco, Sonia Verp, Sandra Offner, Delphine Grun, Didier Trono
Publicado en: Development, Edición 147/2, 2020, Página(s) dev177725, ISSN 0950-1991
Editor: The Company of Biologists Ltd.
DOI: 10.1242/dev.177725

KAP1 targets actively transcribed genomic loci to exert pleomorphic effects on RNA polymerase II activity

Autores: Annamaria Kauzlaric, Suk Min Jang, Mehdi Morchikh, Marco Cassano, Evarist Planet, Monsef Benkirane, Didier Trono
Publicado en: Philosophical Transactions of the Royal Society B: Biological Sciences, Edición 375/1795, 2020, Página(s) 20190334, ISSN 0962-8436
Editor: Royal Society of London
DOI: 10.1098/rstb.2019.0334

KRAB zinc finger protein ZNF676 controls the transcriptional influence of LTR12-related endogenous retrovirus sequences

Autores: Alexandra Iouranova, Delphine Grun , Tamara Rossy , Julien Duc , Alexandre Coudray , Michael Imbeault , Jonas de Tribolet-Hardy , Priscilla Turelli , Alexandre Persat , Didier Trono
Publicado en: Mobile DNA, Edición 13, 2022, ISSN 1759-8753
Editor: BioMed Central
DOI: 10.1186/s13100-021-00260-0

A KRABsody for Embryo-Placental Development

Autores: Didier Trono
Publicado en: Developmental Cell, Edición 41/6, 2017, Página(s) 578-580, ISSN 1534-5807
Editor: Cell Press
DOI: 10.1016/j.devcel.2017.06.005

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