Human Brain Project Specific Grant Agreement 1

CORDIS bietet Links zu öffentlichen Ergebnissen und Veröffentlichungen von HORIZONT-Projekten.

Links zu Ergebnissen und Veröffentlichungen von RP7-Projekten sowie Links zu einigen Typen spezifischer Ergebnisse wie Datensätzen und Software werden dynamisch von OpenAIRE abgerufen.

Leistungen

D11.5.1 Education Programme Report

WPs involved: WP 11.5 This report will provide a detailed description of the HBP Curriculum as well as evaluation, statistics, conclusions and outlook of the HBP Education Programme tasks.

D 2.7.5 CDP6 Components Report for SGA1 M13-M24

The report will include a detailed overview of the components and products delivered and related outcomes for M13-M24 of SGA1. The tasks contributing to the CDP will be mentioned and responsible for the results.

D 7.6.1 High-Performance Analytics and Computing Platform specification update

"WPs involved: WP7.1, WP7.2, WP7.3, WP7.4, WP7.5 & WP7.6 This document is an update of the Ramp-Up Phase Deliverable D7.7.2 ""High Performance Computing Platform v1 - specification document"". It will provide a detailed specification of the High-Performance Analytics and Computing Platform at the end of SGA1."

D 2.7.1 SP2 Human Brain Organisation - Results for SGA1 Period 1

WPs involved: WP2.1, WP2.2., WP2.3, WP2.4, WP2.5, WP2.6 & WP2.7 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: Research results, tools and methods and contribution to initiate the platforms (for Period 1): Description of the data, tools and methods produced and developed in SP2 during the SGA1 phase and their contribution to the platforms. This package will include genetic factors contributing to at least one morphological / cognitive factor, genetic variants and individual genomic profiles, new cytoarchitectonic probabilistic maps of 5 or more human brain regions, mean densities of 15 different receptors in human anterior, mid- and posterior cingulate cortex, early extrastriate and higher visual areas, receptor distributions for selected areas of an initial native Big Brain parcellation, mapped U-fibre bundles and their microstructure, electrophysiological profiles and matching morphologies, massive mapping data from the 12 subjects of the IBC cohort, image-based meta-analysis of multiple functional datasets handled by HBP, framework for multi-modal mapping for one initial region of interest, systematic multi-modal mapping and characterization for at least 3 ROIs, differential laminar‐specific fMRI signals along feedforward ‐and feedback pathways in monkey and humans, model of spatial and feature-based attention effects at the level of cortical columns and layers, excitatory and inhibitory synaptic connections in rodent neocortex and their neuromodulation, effect of ventral midbrain stimulation on cortical representations in monkey, sulcus‐based alignment of cytoarchitectonic and diffusion‐based parcellations, connectivity matrix of the cytoarchitectonic and diffusion‐based parcellations, EEG recording of the first 30 patients localized relative to the HBP connectome nodes, initial prototype of shape model and inter-individual spatial alignment, automatic extraction and identification of sulci from MRI, matching between small and large FoV PLI, HBP workflow for computing cell counts in high-resolution microscopic data.

D 12.5.3 Report on Ethics and Society activities

WPs involved: WP12.1, WP12.2, WP12.3, WP12.4 & WP12.5 This is the second SP12 report on Ethics and Society activities during SGA-1, detailing the main outcomes and results achieved by SP12 work packages in M12-24.

D 8.6.1 SP8 Medical Informatics Platform –Architecture and Deployment Plan

WPs involved: WP8.1, WP8.2, WP8.3, WP8.4, WP8.5 & WP8.6 • Architecture: Description of overall architecture for Medical Informatics Platform, providing a detailed plan for how “the architecture split designs will now converge” specifying who is responsible for what and when it must be done. • Deployment: Detailed deployment plan, specifying how difficulties encountered in deploying MIP to first five hospitals will be overcome specifying who is responsible for what and when it must be done. • Identify dependencies between architecture and deployment.

D 3.5.2 SP3 Systems and Cognitive Neuroscience - Results for SGA1 Period 2

WPs involved: WP3.1, WP3.2, WP3.3, WP3.4 WP3.5 & WP3.6 Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • WP3.1 input: Studies in human brain imaging, rodent electrophysiology, optogenetics, and computational modelling of feedforward and feedback processing in the context of object recognition, and reinforcement learning. This report will include data on improvements made in modelling, experiments, techniques, and reports links to data repositories, use of Platforms as well as collaboration in Co-design projects. • WP3.2 input Period 1: Slow Wave Activity experiments, models and simulations and interaction with HBP platforms. This report will include usage statistics, TRLs, collaboration in Co-design projects and updates on data accessibility. • WP3.3 input Period 1: Studies in human brain imaging, rodent electrophysiology, optogenetics, computational modelling and robotics of concerning Episodic memory and multisensory integration, with Robot demos. This report will include data on improvements made in experiments & measurement techniques, use of the tools by colleagues in the field and/or in HBP, links to data repositories, collaboration in Co-design projects, and TRLs. • WP3.4 input Period 1: Studies in electrophysiology, imaging and behaviour in rodents and humans, and multilevel computational modelling. This report will include methods for assessing consciousness and testing of theories of consciousness; links to data repositories, collaboration in Co-design projects, use of platforms, usage statistics for tools delivered. • WP3.5 input Period 1: Data usage plan and impact of data on models. A detailed plan of data usage and the impact of data on models for the data will be generated • WP3.6 input Period 1: Scientific report on SP3 contributions to the development of the infrastructure and co-design projects. This report will include the development of network simulation models, data analysis methods and other tools, as well as constraints and requirements for further applications using HBP platforms, and usage statistics for tools delivered.

D 12.5.1 Report on Ethics and Society activities

WPs involved: WP12.1, WP12.2, WP12.3, WP12.4 & WP12.5 This is the first SP12 report on Ethics and Society activities during SGA-1, detailing the main outcomes and results achieved by SP12 work packages in M1-12.

D 11.3.3 HBP Software Engineering and Quality Assurance Approach

WPs involved: WP11.2, WP11.3, WP5.6, WP6.5, WP7.5, WP8.6, WP9.5 & WP10.7 • This will describe the overall software engineering and quality assurance approach (covering both agile and codesign processes) This will update related content in System Engineering Package sent by PCO (Jeff Muller) to the EC in March 2016 and address feedback points received from the EC. NOTE: PEER REVIEW REQUIRED

D 5.8.3 SP5 Neuroinformatics Platform - Results for SGA1 Period 2

Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP Products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDES: Research results, tools and methods and contribution to initiate the Platforms (for Period 2)

D 4.7.1 SP4 Theoretical Neuroscience - Results for SGA1 Period 1

WPs involved: WP4.1, WP4.2, WP4.3, WP4.4, WP4.5 & WP4.7 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: • WP4.1 Period 1: Report of publications on theoretical approaches that bridge scales for model types, for brain signals and for model scales. Report of publications on theoretical approaches that bridge scales for model types (detailed vs. simplified), for brain signals (cellular vs. large-scale) and for model scales (cellular vs populations). • WP4.2 Period 1: Implementation of multi-area model of macaque visual cortex relating macroscopic brain connectivity to the microscopic connectivity. Implementation of multi-area model of macaque visual cortex relating macroscopic brain connectivity to the microscopic connectivity available to consortium through collaboratory and documented. • WP4.3 Period 1: Report of publications on theoretical approaches that relate learning and memory to synaptic plasticity. Report of publications on theoretical approaches that relate learning and memory to synaptic plasticity. • WP4.4 Period 1: Models of neural and large-scale brain activity to understand the constraints imposed by structural connectivity on their behaviour with applications to resting-state brain activity, vision, motor-control and spatial navigation. WP 4.4 will create models of neural and large-scale brain activity to understand the constraints imposed by structural connectivity on their behaviour with applications to resting-state brain activity, vision, motor-control and spatial navigation. • WP4.5 Period 1: Report on first use case(s) for the comparison of brain activity data and model simulation(s). Report on first use case(s) for the comparison of brain activity data and model simulation

D 4.7.3 CDP5 Components Report for SGA1 M13-M24

D 12.5.4 Second Opinions Report

WPs involved: WP12.1, WP12.2, WP12.3, WP12.4 & WP12.5 This is the second “opinions” reports formulating SP12 observations and recommendations about ethical and social issues arising during the course of HBP

D 2.7.3 CDP3 Components Report for SGA1 M13-M24

D 4.7.2 SP4 Theoretical Neuroscience - Results for SGA1 Period 2

WPs involved: WP4.1, WP4.2, WP4.3, WP4.4, WP4.5 & WP4.7 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • WP4.1: Report of publications on theoretical approaches that bridge scales for model types, for brain signals and for model scales. Report of publications on theoretical approaches that bridge scales for model types (detailed vs. simplified), for brain signals (cellular vs. large-scale) and for model scales (cellular vs populations). • WP4.2: Implementation of multi-area model of macaque visual cortex relating macroscopic brain connectivity to the microscopic connectivity. Implementation of multi-area model of macaque visual cortex relating macroscopic brain connectivity to the microscopic connectivity available to consortium through collaboratory and documented. • WP4.3: Report of publications on theoretical approaches that relate learning and memory to synaptic plasticity. Report of publications on theoretical approaches that relate learning and memory to synaptic plasticity. • WP4.4: Models of neural and large-scale brain activity to understand the constraints imposed by structural connectivity on their behaviour with applications to resting-state brain activity, vision, motor-control and spatial navigation. WP 4.4 will create models of neural and large-scale brain activity to understand the constraints imposed by structural connectivity on their behaviour with applications to resting-state brain activity, vision, motor-control and spatial navigation. • WP4.5: Report on first use case(s) for the comparison of brain activity data and model simulation(s). Report on first use case(s) for the comparison of brain activity data and model simulation(s)..

D 9.5.2 SP9 Neuromorphic Computing Platform - Results for SGA1 Period 2

WPs involved: WP9.1, WP9.2, WP9.3, WP9.4 & WP9.5 Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • Neuromorphic Computing Platform: Status description: Description of the status of the full range of the neuromorphic computing platform (standalone systems and big platform systems) including the software stack and a guidebook update release.

D 1.5.2 SP1 Mouse Brain Organisation - Results for SGA1 Period 2

WPs involved: WP1.1, WP1.2, WP1.3, WP1.4 & WP1.5 Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • Brain Atlas data package. This data, which will be deposited in the HBP Brain Atlas, will include: Maps of the vasculature; Whole-brain maps of different cellular types based on gene expression; Microcircuitry analysis, proteins and receptor distributions and fibre architecture; Maps of cellular distributions, long-range axonal projections, and synaptic proteins; reconstructed morphologies of major neuron types; Whole-brain activation maps; Spatial organization principles in brain activation; Functional maps of cortical activity. • Brain Modelling data package. This package will include strategic data on quantitative description of synaptic connections on neurons; numbers, distributions and relative densities of cells in selected regions and where possible across the whole brain; statistical parameters characterizing particular cell types and spatial arrangements between neurons, glia and blood vessels; a high-resolution quantitative synaptic map of exemplar brain regions; EM blocks scans and volume analysis of exemplar brain regions with quantification of the neuropil organization; microcircuit analysis; functional maps of brain activation; morphological and physiological comparative studies of neurons between rodent and human.

D 12.5.2 First Opinions Report

WPs involved: WP12.1, WP12.2, WP12.3, WP12.4 & WP12.5 This is the first “opinions” reports formulating SP12 observations and recommendations about ethical and social issues arising during the course of HBP.

D 3.5.1 SP3 Systems and Cognitive Neuroscience - Results for SGA1 Period 1

WPs involved: WP3.1, WP3.2, WP3.3, WP3.4 WP3.5 & WP3.6 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: • WP3.1 input Period 1: Studies in human brain imaging, rodent electrophysiology, optogenetics, and computational modelling of feedforward and feedback processing in the context of object recognition, and reinforcement learning. This report will include data on improvements made in modelling, experiments, techniques, and reports links to data repositories, use of Platforms as well as collaboration in Co-design projects. • WP3.2 input Period 1: Slow Wave Activity experiments, models and simulations and interaction with HBP platforms. This report will include usage statistics, TRLs, collaboration in Co-design projects and updates on data accessibility. • WP3.3 input Period 1: Studies in human brain imaging, rodent electrophysiology, optogenetics, computational modelling and robotics of concerning Episodic memory and multisensory integration, with Robot demos. This report will include data on improvements made in experiments & measurement techniques, use of the tools by colleagues in the field and/or in HBP, links to data repositories, collaboration in Co-design projects, and TRLs. • WP3.4 input Period 1: Studies in electrophysiology, imaging and behaviour in rodents and humans, and multilevel computational modelling. This report will include methods for assessing consciousness and testing of theories of consciousness; links to data repositories, collaboration in Co-design projects, use of platforms, usage statistics for tools delivered. • WP3.5 input Period 1: Data usage plan and impact of data on models. A detailed plan of data usage and the impact of data on models for the data will be generated • WP3.6 input Period 1: Scientific report on SP3 contributions to the development of the infrastructure and co-design projects. This report will include the development of network simulation models, data analysis methods and other tools, as well as constraints and requirements for further applications using HBP platforms, and usage statistics for tools delivered.

D 6.5.3 CDP2 Components Report for SGA1 M13-M24

D 4.6.2 WP4.6 EITN - Activity Report SGA1 Period 2

WPs involved: WP4.6 European Institute for Theoretical Neuroscience (EITN) activity report for M13-24

D 11.3.1 HBP Collaboratory Architecture

WPs involved: WP11.2, WP11.3, & WP7.5 • HBP Collaboratory Specification This will update related content in System Engineering Package sent by PCO (Jeff Muller) to the EC in March 2016 and address feedback points received from the EC. NOTE: PEER REVIEW REQUIRED

D 1.5.3 Detailed plan of data usage and the impact of generated data on models

WPs involved: WP1.1, WP1.2, WP1.3, WP1.4 & WP1.5 From M1 to M24, a detailed plan for data usage via cross-SP working meetings will be drawn up. We will provide strategic structural and functional data to model and simulate the four major brain circuits and to set up their use in modelling at sub-cellular, cellular and circuit levels. Due to the possible constraints to produce new data in terms of time and resources, the data generated will be sent to the platforms as it is produced, i.e., not only the initial (and also intermediate), but also incomplete datasets to test all the pipelines. The identification of the gaps between what data is available and what data is needed will be implemented following a scale of priorities for SP2, SP3, SP4, SP5 and SP6. The modelling work and the coordination with the relevant SPs will ensure that data generated is strategic and is used in HBP models. This strategic data plan will be delivered in M24 and will be implemented in the SGA2 and will continue throughout the project.

D5.8.1 Strategy and Architecture for HBP data viewers

New Deliverable requested by EC Feedback from Review of 24 Oct 2016.

D 11.2.4 Report on cumulative expenditure incurred

In line with the reporting streamlining, this document will provide general cost incurred by the Consortium

D 2.7.2 SP2 Human Brain Organisation - Results for SGA1 Period 2

WPs involved: WP2.1, WP2.2., WP2.3, WP2.4, WP2.5, WP2.6 & WP2.7 Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: Research results, tools and methods and contribution to initiate the platforms (for Period 2): This data, which will be deposited in the HBP Brain Atlas, will include: Maps of the vasculature; Microcircuitry analysis, proteins and receptor distributions and fibre architecture; Maps of cellular distributions and synaptic proteins; reconstructed morphologies of major neuron types; Functional maps of cortical activity.

D 10.7.1 Release Plan for the NRP for SGA1 and project implementation proposal

WPs involved: WP10.1, WP10.2, WP10.3, WP10.4, WP10.5 & WP10.6 This document will describe the release plan for the SP10 Platform and will detail out the project implementation proposal. It will receive input from WP 10.1, 10.2, 10.3, 10.4, 10.5 and 10.6.

D 1.5.4 CDP1 Components Report for SGA1 M13-M24

D 5.6.1 Revised SP5 work plan for SGA1 (DPIT)

WPs involved: WP11.3, WP5.1, WP5.2, WP5.3, WP5.4, WP5.5 & WP5.6 plus WP1.5, WP2.7, WP3.5, WP4.5, WP6.5, WP7.6, WP8.6, WP9.5 & WP10.7 The SP5 Month 6 Deliverable D5.6.1 Revised SP5 work plan for SGA1 will form the basis for a special review as agreed between the EC and the HBP. The revisions in D5.6.1 are expected to require an amendment to the SGA1. The Deliverable needs to be accepted by the SIB prior to submission. The Month 6 Deliverable D5.6.1 will replace the Month 3 Deliverable foreseen earlier in the SGA negotiations. D5.6.1 will include: - Data Flow and Project Lifecycle: a listing of data related components from all use cases and datasets, from all SPs and CDPs, in the Project, documenting each Task/component. - A reviewed and agreed SP5 architecture, identifying all components, how they interact, who is responsible for which Task and component, and what each one does. It should cover both tools and supporting infrastructure. - A revised management and implementation plan for SP5 and data-related parts of other SPs, including a revised and expanded list of SP5 Milestones and Deliverables, featuring a visual roadmap / timetable. - A global HBP data-related work breakdown structure and PERT chart with prioritized workflows for SP5 in interaction with the entire HBP. - A comprehensive data curation plan for the entire HBP. - The division of responsibilities, setting out what is done by SP5 and what is done by other SPs. - A description of FeDaPP, its elements and its role in the HBP, along with its interaction with the NIP. - Plans for interaction with external partners. - A budget plan, allocating both money and manpower and broken down, by SP, WP, Task and Partner.

D 9.5.1 SP9 Neuromorphic Computing Platform - Results for SGA1 Period 1

WPs involved: WP9.1, WP9.2, WP9.3, WP9.4 & WP9.5 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: • Neuromorphic Computing Platform: Intermediate Status description report (Period 1). Description of the status of the full range of the neuromorphic computing platform (standalone systems and big platform systems) including the software stack and a guidebook update release.

D 5.6.2 HBP Platform Architecture (DPIT)

WPs involved: WP5.6, WP7.5, WP11.2 & WP11.3 Overall platform architecture of HBP, including: • FedApp.and its funding (EC & other sources) • Target TRL levels for each platform • RI construction plan, with detailed work breakdown structure • RI user support This will update related content in System Engineering Package sent by PCO (Jeff Muller) to the EC in March 2016 and address feedback points received from the EC. NOTE: PEER REVIEW REQUIRED

D 1.5.1 SP1 Mouse Brain Organisation - Results for SGA1 Period 1

WPs involved: WP1.1, WP1.2, WP1.3, WP1.4 & WP1.5 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: • Brain Atlas data package (Period 1). This data, which will be deposited in the HBP Brain Atlas, will include: Maps of the vasculature; Whole-brain maps of different cellular types based on gene expression; Microcircuitry analysis, proteins and receptor distributions and fibre architecture; Maps of cellular distributions, long-range axonal projections, and synaptic proteins; reconstructed morphologies of major neuron types; Whole-brain activation maps; Spatial organization principles in brain activation; Functional maps of cortical activity. • Brain Modelling data package (Period 1). This package will include strategic data on quantitative description of synaptic connections on neurons; numbers, distributions and relative densities of cells in selected regions and where possible across the whole brain; statistical parameters characterizing particular cell types and spatial arrangements between neurons, glia and blood vessels; a high-resolution quantitative synaptic map of exemplar brain regions; EM blocks scans and volume analysis of exemplar brain regions with quantification of the neuropil organization; microcircuit analysis; functional maps of brain activation; morphological and physiological comparative studies of neurons between rodent and human.

D 4.6.1 WP4.6 EITN - Activity report SGA1 Period 1

WPs involved: WP4.6 European Institute for Theoretical Neuroscience (EITN) activity report for M1-12

D 11.2.1 Central Services IT / Web Tools Specifications

WPs involved: WP11.2, WP11.3, WP11.4 & WP11.5 This document will compile the specifications for the following IT / Web Tools: 1. HBP public website redesign 2. Education Programme website redesign 3. ERP knowledge management tool for PCO Explain ecosystem of PCO IT coordination tools

D 2.7.4 CDP4 Components Report for SGA1 M13-M24

D 8.6.4 SP8 Medical Informatics Platform – MIP validation plan

SP8 Medical Informatics Platform – MIP validation plan

D 5.8.2 SP5 Neuroinformatics Platform - Results for SGA1 Period 1

Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP Products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: Research results, tools and methods and contribution to initiate the Platforms (for Period 1)

D 8.6.2 SP8 Medical Informatics Platform - Results for SGA1 Period 1

WPs involved: WP8.1, WP8.2, WP8.3, WP8.4, WP8.5 & WP8.6 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: • Medical Informatics Platform v1.5 (Period 1). This deliverable will consist of the second formal release of the Medical Informatics Platform and related documentation (Release notes, user guide, technical documentation, data management plan and deployment plan). The platform, accessible to end-users via the HBP Collaboratory, will provide access to the clinical infrastructure (WP8.1). The platform will provide access to the user community (neuroscientists, clinicians, data scientists) thought web apps and microservices (WP8.5) to the tools developed in WP8.3/8.4/8.5. The platform will also include services for engaging the general public.

D 10.7.3 SP10 Neurorobotics Platform - Results for SGA1 Period 2

WPs involved: WP10.1, WP10.2, WP10.3, WP10.4, WP10.5 & WP10.6 Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • Public release NR Platform and software with support for physics-based light, musculoskeletal robot designer, graphical brain-body integrator. This deliverable will point to the public release of the SP10 platform and all corresponding software packages at the end of the SGA1.

D 8.6.3 SP8 Medical Informatics Platform - Results for SGA1 Period 2

WPs involved: WP8.1, WP8.2, WP8.3, WP8.4, WP8.5 & WP8.6 Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • Medical Informatics Platform v2 (Period 2).This deliverable will consist of the second formal release of the Medical Informatics Platform and related documentation (Release notes, user guide, technical documentation, data management plan and deployment plan). The platform, accessible to end-users via the HBP Collaboratory, will provide access to the clinical infrastructure (WP8.1). The platform will provide access to the user community (neuroscientists, clinicians, data scientists) thought web apps and microservices (WP8.5) to the tools developed in WP8.3/8.4/8.5. The platform will also include services for engaging the general public.

D 6.5.1 SP6 Brain Simulation Platform - Results for SGA1 Period 1

WPs involved: WP6.1, WP6.2, WP6.3, WP6.4 & WP6.5 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website.

D 7.6.2 SP7 High-Performance Analytics and Computing Platform - Results for SGA1 Period 1

WPs involved: WP7.1, WP7.2, WP7.3, WP7.4, WP7.5 & WP7.6 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. COULD INCLUDE: • High Performance Analytics and Computing Platform v1.5 (Period 1): This deliverable will consist of the second formal release of the High Performance Analytics and Computing Platform and related documentation. The platform, accessible to end users through the HBP Collaboratory, will provide the neuroscience community with access to federated HPC and Cloud resources, common developer and software deployment services, SimLab-style support for the porting of applications to novel hardware architectures, the simulator NEST as a service and user support. It will incorporate results from WP7.1, WP7.2, WP7.3 and WP7.4.

D 10.7.2 SP10 Neurorobotics Platform - Results for SGA1 Period 1

WPs involved: WP10.1, WP10.2, WP10.3, WP10.4, WP10.5 & WP10.6 Summary of SP Results for M1-12, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications • SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • NRP roadmap for SGA2: This document will describe the roadmap for the SP10 platform in SGA2 • Effective methods for transferring simulated control architectures to real robots calibration, cross-compilation and remote control. • Public release of NR platform and software with partial implementation of soft body collision, muscles, physics and HMD/CAVE visualization.

D 6.5.2 SP6 Brain Simulation Platform - Results for SGA1 Period 2

WPs involved: WP6.1, WP6.2, WP6.3, WP6.4 & WP6.5 Summary of SP Results for M13-24, broken down by Task: • Actual vs. planned results (due & done/due & not done) • Results passed to another Task, WP or SP (due & done/due & not done) • CDP products (due & done/due & not done) • Milestones due and achieved, how validated, by whom. • Milestones due but not achieved, why, impact, corrective action • Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website. INCLUDE: • Brain Simulation Platform v2: This deliverable will consist of the second formal release of the Brain Simulation Platform and related documentation. The Platform, accessible to end-users via the HBP Collaboratory, will provide access to tools, apps and services developed in WP6.3 and WP6.4 (based on co-design drivers from WP6.1 and WP6.2, as well as CDP1 and CDP2). • Scaffold model Collabs release v2: This deliverable will expose the latest releases of models and simulations of the scaffold modelling activities of WP6.1 and WP6.2 in their respective Collabs, and showcase the underlying workflows of the Brain Simulation Platform. • CDP2 Collab release v2: CDP2 Deliverable: This deliverable will expose the models and simulations of CDP2 in the respective Collab and showcase the underlying workflows of the Brain Simulation Platform and other platforms.

Veröffentlichungen

High-Performance Scientific Computing

Autoren: Edoardo Di Napoli, Marc-André Hermanns, Hristo Iliev, Andreas Lintermann, Alexander Peyser
Veröffentlicht in: Lecture Notes in Computer Science, 2017, ISBN 978-3-319-53862-4
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-53862-4

Neurotechnology and Direct Brain Communication - New insights and responsibilities concerning speechless but communicative subjects

Autoren: Farisco M. Evers K.
Veröffentlicht in: 2016, ISBN 9781-315723983
Herausgeber: Routledge
DOI: 10.4324/9781315723983

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1

Autoren: Sue Denham, Panayiota Poirazi, Erik De Schutter, Karl Friston, Ho Ka Chan, Thomas Nowotny, Dongqi Han, Sungho Hong, Sophie Rosay, Tanja Wernle, Alessandro Treves, Sarah Goethals, Romain Brette, Tomas Van Pottelbergh, Rodolphe Sepulchre, Alex D. Bird, Hermann Cuntz, Pedro J. Gonçalves, Jan-Matthis Lueckmann, Giacomo Bassetto, Marcel Nonnenmacher, Jakob H. Macke, Audrey J. Sederberg, Jason N. MacLe
Veröffentlicht in: BMC Neuroscience, Ausgabe 18/S1, 2017, ISSN 1471-2202
Herausgeber: BioMed Central
DOI: 10.1186/s12868-017-0370-3

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 2

Autoren: Leonid L. Rubchinsky, Sungwoo Ahn, Wouter Klijn, Ben Cumming, Stuart Yates, Vasileios Karakasis, Alexander Peyser, Marmaduke Woodman, Sandra Diaz-Pier, James Deraeve, Eliana Vassena, William Alexander, David Beeman, Pawel Kudela, Dana Boatman-Reich, William S. Anderson, Niceto R. Luque, Francisco Naveros, Richard R. Carrillo, Eduardo Ros, Angelo Arleo, Jacob Huth, Koki Ichinose, Jihoon Park, Yuji
Veröffentlicht in: BMC Neuroscience, Ausgabe 18/S1, 2017, ISSN 1471-2202
Herausgeber: BioMed Central
DOI: 10.1186/s12868-017-0371-2

A Combination of Machine Learning and Cerebellar-like Neural Networks for the Motor Control and Motor Learning of the Fable Modular Robot

Autoren: Ismael Baira Ojeda, Silvia Tolu, Moisés Pacheco, David Johan Christensen, Henrik Hautop Lund
Veröffentlicht in: Journal of Robotics, Networking and Artificial Life, Ausgabe 4/1, 2017, Seite(n) 62, ISSN 2352-6386
Herausgeber: Atlantis Press
DOI: 10.2991/jrnal.2017.4.1.14

Fast–Slow Bursters in the Unfolding of a High Codimension Singularity and the Ultra-slow Transitions of Classes

Autoren: Maria Luisa Saggio, Andreas Spiegler, Christophe Bernard, Viktor K. Jirsa
Veröffentlicht in: The Journal of Mathematical Neuroscience, Ausgabe 7/1, 2017, ISSN 2190-8567
Herausgeber: Springer Verlag
DOI: 10.1186/s13408-017-0050-8

Predicting the spatiotemporal diversity of seizure propagation and termination in human focal epilepsy

Autoren: Timothée Proix, Viktor K. Jirsa, Fabrice Bartolomei, Maxime Guye, Wilson Truccolo
Veröffentlicht in: Nature Communications, Ausgabe 9/1, 2018, ISSN 2041-1723
Herausgeber: Nature Publishing Group
DOI: 10.1038/s41467-018-02973-y

Whole-brain analytic measures of network communication reveal increased structure-function correlation in right temporal lobe epilepsy

Autoren: Jonathan Wirsich, Alistair Perry, Ben Ridley, Timothée Proix, Mathieu Golos, Christian Bénar, Jean-Philippe Ranjeva, Fabrice Bartolomei, Michael Breakspear, Viktor Jirsa, Maxime Guye
Veröffentlicht in: NeuroImage: Clinical, Ausgabe 11, 2016, Seite(n) 707-718, ISSN 2213-1582
Herausgeber: Elsevier BV
DOI: 10.1016/j.nicl.2016.05.010

Defining epileptogenic networks: Contribution of SEEG and signal analysis

Autoren: Fabrice Bartolomei, Stanislas Lagarde, Fabrice Wendling, Aileen McGonigal, Viktor Jirsa, Maxime Guye, Christian Bénar
Veröffentlicht in: Epilepsia, Ausgabe 58/7, 2017, Seite(n) 1131-1147, ISSN 0013-9580
Herausgeber: Blackwell Publishing Inc.
DOI: 10.1111/epi.13791

A new neuroinformatics approach to personalized medicine in neurology

Autoren: Maria I. Falcon, Viktor Jirsa, Ana Solodkin
Veröffentlicht in: Current Opinion in Neurology, Ausgabe 29/4, 2016, Seite(n) 429-436, ISSN 1350-7540
Herausgeber: Lippincott Williams & Wilkins Ltd.
DOI: 10.1097/WCO.0000000000000344

Resting state brain dynamics and its transients: a combined TMS-EEG study

Autoren: Mireille Bonnard, Sophie Chen, Jérôme Gaychet, Marcel Carrere, Marmaduke Woodman, Bernard Giusiano, Viktor Jirsa
Veröffentlicht in: Scientific Reports, Ausgabe 6/1, 2016, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/srep31220

Structure and Topology Dynamics of Hyper-Frequency Networks during Rest and Auditory Oddball Performance

Autoren: Viktor Müller, Dionysios Perdikis, Timo von Oertzen, Rita Sleimen-Malkoun, Viktor Jirsa, Ulman Lindenberger
Veröffentlicht in: Frontiers in Computational Neuroscience, Ausgabe 10, 2016, ISSN 1662-5188
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fncom.2016.00108

Sex differences in the functional connectivity of the amygdalae in association with cortisol

Autoren: Lydia Kogler, Veronika I. Müller, Eva-Maria Seidel, Roland Boubela, Klaudius Kalcher, Ewald Moser, Ute Habel, Ruben C. Gur, Simon B. Eickhoff, Birgit Derntl
Veröffentlicht in: NeuroImage, Ausgabe 134, 2016, Seite(n) 410-423, ISSN 1053-8119
Herausgeber: Academic Press
DOI: 10.1016/j.neuroimage.2016.03.064

Correlations Between Personality and Brain Structure: A Crucial Role of Gender

Autoren: Alessandra D. Nostro, Veronika I. Müller, Andrew T. Reid, Simon B. Eickhoff
Veröffentlicht in: Cerebral Cortex, 2016, ISSN 1047-3211
Herausgeber: Oxford University Press
DOI: 10.1093/cercor/bhw191

Behavior, sensitivity, and power of activation likelihood estimation characterized by massive empirical simulation

Autoren: Simon B. Eickhoff, Thomas E. Nichols, Angela R. Laird, Felix Hoffstaedter, Katrin Amunts, Peter T. Fox, Danilo Bzdok, Claudia R. Eickhoff
Veröffentlicht in: NeuroImage, Ausgabe 137, 2016, Seite(n) 70-85, ISSN 1053-8119
Herausgeber: Academic Press
DOI: 10.1016/j.neuroimage.2016.04.072

How do parcellation size and short-range connectivity affect dynamics in large-scale brain network models?

Autoren: Timothée Proix, Andreas Spiegler, Michael Schirner, Simon Rothmeier, Petra Ritter, Viktor K. Jirsa
Veröffentlicht in: NeuroImage, Ausgabe 142, 2016, Seite(n) 135-149, ISSN 1053-8119
Herausgeber: Academic Press
DOI: 10.1016/j.neuroimage.2016.06.016

Heterogeneity of time delays determines synchronization of coupled oscillators

Autoren: Spase Petkoski, Andreas Spiegler, Timothée Proix, Parham Aram, Jean-Jacques Temprado, Viktor K. Jirsa
Veröffentlicht in: Physical Review E, Ausgabe 94/1, 2016, ISSN 2470-0045
Herausgeber: American Physical Society (APS)
DOI: 10.1103/PhysRevE.94.012209

Resting-state test–retest reliability of a priori defined canonical networks over different preprocessing steps

Autoren: Deepthi P. Varikuti, Felix Hoffstaedter, Sarah Genon, Holger Schwender, Andrew T. Reid, Simon B. Eickhoff
Veröffentlicht in: Brain Structure and Function, Ausgabe 222/3, 2017, Seite(n) 1447-1468, ISSN 1863-2653
Herausgeber: Springer Verlag
DOI: 10.1007/s00429-016-1286-x

Estimating Fiber Orientation Distribution Functions in 3D-Polarized Light Imaging

Autoren: Markus Axer, Sven Strohmer, David Gräßel, Oliver Bücker, Melanie Dohmen, Julia Reckfort, Karl Zilles, Katrin Amunts
Veröffentlicht in: Frontiers in Neuroanatomy, Ausgabe 10, 2016, ISSN 1662-5129
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fnana.2016.00040

Spatial normalization of brain images and beyond

Autoren: J.-F. Mangin, J. Lebenberg, S. Lefranc, N. Labra, G. Auzias, M. Labit, M. Guevara, H. Mohlberg, P. Roca, P. Guevara, J. Dubois, F. Leroy, G. Dehaene-Lambertz, A. Cachia, T. Dickscheid, O. Coulon, C. Poupon, D. Rivière, K. Amunts, Z.Y. Sun
Veröffentlicht in: Medical Image Analysis, Ausgabe 33, 2016, Seite(n) 127-133, ISSN 1361-8415
Herausgeber: Elsevier BV
DOI: 10.1016/j.media.2016.06.008

Functional Decoding and Meta-analytic Connectivity Modeling in Adult Attention-Deficit/Hyperactivity Disorder

Autoren: Samuele Cortese, F. Xavier Castellanos, Claudia R. Eickhoff, Giulia D’Acunto, Gabriele Masi, Peter T. Fox, Angela R. Laird, Simon B. Eickhoff
Veröffentlicht in: Biological Psychiatry, Ausgabe 80/12, 2016, Seite(n) 896-904, ISSN 0006-3223
Herausgeber: Elsevier BV
DOI: 10.1016/j.biopsych.2016.06.014

Layer-specific cholinergic control of human and mouse cortical synaptic plasticity

Autoren: Matthijs B. Verhoog, Joshua Obermayer, Christian A. Kortleven, René Wilbers, Jordi Wester, Johannes C. Baayen, Christiaan P. J. De Kock, Rhiannon M. Meredith, Huibert D. Mansvelder
Veröffentlicht in: Nature Communications, Ausgabe 7, 2016, Seite(n) 12826, ISSN 2041-1723
Herausgeber: Nature Publishing Group
DOI: 10.1038/ncomms12826

High-frequency oscillations in human and monkey neocortex during the wake–sleep cycle

Autoren: Michel Le Van Quyen, Lyle E. Muller, Bartosz Telenczuk, Eric Halgren, Sydney Cash, Nicholas G. Hatsopoulos, Nima Dehghani, Alain Destexhe
Veröffentlicht in: Proceedings of the National Academy of Sciences, Ausgabe 113/33, 2016, Seite(n) 9363-9368, ISSN 0027-8424
Herausgeber: National Academy of Sciences
DOI: 10.1073/pnas.1523583113

Stochastic inference with spiking neurons in the high-conductance state

Autoren: Mihai A. Petrovici, Johannes Bill, Ilja Bytschok, Johannes Schemmel, Karlheinz Meier
Veröffentlicht in: Physical Review E, Ausgabe 94/4, 2016, Seite(n) 42312, ISSN 2470-0045
Herausgeber: American Physical Society
DOI: 10.1103/PhysRevE.94.042312

Groupwise connectivity-based parcellation of the whole human cortical surface using watershed-driven dimension reduction

Autoren: Sandrine Lefranc, Pauline Roca, Matthieu Perrot, Cyril Poupon, Denis Le Bihan, Jean-François Mangin, Denis Rivière
Veröffentlicht in: Medical Image Analysis, Ausgabe 30, 2016, Seite(n) 11-29, ISSN 1361-8415
Herausgeber: Elsevier BV
DOI: 10.1016/j.media.2016.01.003

Neuroimaging Research: From Null-Hypothesis Falsification to Out-of-Sample Generalization

Autoren: D. Bzdok, G. Varoquaux, B. Thirion
Veröffentlicht in: Educational and Psychological Measurement, 2016, ISSN 0013-1644
Herausgeber: SAGE Publications
DOI: 10.1177/0013164416667982

ViSimpl: Multi-View Visual Analysis of Brain Simulation Data

Autoren: Sergio E. Galindo, Pablo Toharia, Oscar D. Robles, Luis Pastor
Veröffentlicht in: Frontiers in Neuroinformatics, Ausgabe 10, 2016, ISSN 1662-5196
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fninf.2016.00044

Implementation errors in the GingerALE Software: Description and recommendations

Autoren: Simon B. Eickhoff, Angela R. Laird, P. Mickle Fox, Jack L. Lancaster, Peter T. Fox
Veröffentlicht in: Human Brain Mapping, Ausgabe 38/1, 2017, Seite(n) 7-11, ISSN 1065-9471
Herausgeber: John Wiley & Sons Inc.
DOI: 10.1002/hbm.23342

3D Reconstructed Cyto-, Muscarinic M2 Receptor, and Fiber Architecture of the Rat Brain Registered to the Waxholm Space Atlas

Autoren: Nicole Schubert, Markus Axer, Martin Schober, Anh-Minh Huynh, Marcel Huysegoms, Nicola Palomero-Gallagher, Jan G. Bjaalie, Trygve B. Leergaard, Mehmet E. Kirlangic, Katrin Amunts, Karl Zilles
Veröffentlicht in: Frontiers in Neuroanatomy, Ausgabe 10, 2016, ISSN 1662-5129
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fnana.2016.00051

Functional Mechanisms of Recovery after Chronic Stroke: Modeling with the Virtual Brain

Autoren: M. I. Falcon, J. D. Riley, V. Jirsa, A. R. McIntosh, E. Elinor Chen, A. Solodkin
Veröffentlicht in: eNeuro, Ausgabe 3/2, 2016, ISSN 2373-2822
Herausgeber: Society for Neuroscience
DOI: 10.1523/ENEURO.0158-15.2016

Unique membrane properties and enhanced signal processing in human neocortical neurons

Autoren: Guy Eyal, Matthijs B Verhoog, Guilherme Testa-Silva, Yair Deitcher, Johannes C Lodder, Ruth Benavides-Piccione, Juan Morales, Javier DeFelipe, Christiaan PJ de Kock, Huibert D Mansvelder, Idan Segev
Veröffentlicht in: eLife, Ausgabe 5, 2016, ISSN 2050-084X
Herausgeber: eLife Sciences Publications
DOI: 10.7554/eLife.16553

Imbalance in subregional connectivity of the right temporoparietal junction in major depression

Autoren: Timm B. Poeppl, Veronika I. Müller, Felix Hoffstaedter, Danilo Bzdok, Angela R. Laird, Peter T. Fox, Berthold Langguth, Rainer Rupprecht, Christian Sorg, Valentin Riedl, Roberto Goya-Maldonado, Oliver Gruber, Simon B. Eickhoff
Veröffentlicht in: Human Brain Mapping, Ausgabe 37/8, 2016, Seite(n) 2931-2942, ISSN 1065-9471
Herausgeber: John Wiley & Sons Inc.
DOI: 10.1002/hbm.23217

Selective Activation of Resting-State Networks following Focal Stimulation in a Connectome-Based Network Model of the Human Brain

Autoren: A. Spiegler, E. C. A. Hansen, C. Bernard, A. R. McIntosh, V. K. Jirsa
Veröffentlicht in: eNeuro, Ausgabe 3/5, 2016, ISSN 2373-2822
Herausgeber: eNeuro, Society for Neuroscience
DOI: 10.1523/ENEURO.0068-16.2016

Hybrid Scheme for Modeling Local Field Potentials from Point-Neuron Networks

Autoren: Espen Hagen, David Dahmen, Maria L. Stavrinou, Henrik Lindén, Tom Tetzlaff, Sacha J. van Albada, Sonja Grün, Markus Diesmann, Gaute T. Einevoll
Veröffentlicht in: Cerebral Cortex, Ausgabe 26/12, 2016, Seite(n) 4461-4496, ISSN 1047-3211
Herausgeber: Oxford University Press
DOI: 10.1093/cercor/bhw237

The Human Brainnetome Atlas: A New Brain Atlas Based on Connectional Architecture

Autoren: Lingzhong Fan, Hai Li, Junjie Zhuo, Yu Zhang, Jiaojian Wang, Liangfu Chen, Zhengyi Yang, Congying Chu, Sangma Xie, Angela R. Laird, Peter T. Fox, Simon B. Eickhoff, Chunshui Yu, Tianzi Jiang
Veröffentlicht in: Cerebral Cortex, Ausgabe 26/8, 2016, Seite(n) 3508-3526, ISSN 1047-3211
Herausgeber: Oxford University Press
DOI: 10.1093/cercor/bhw157

Different involvement of subregions within dorsal premotor and medial frontal cortex for pro- and antisaccades

Autoren: Edna C. Cieslik, Isabelle Seidler, Angela R. Laird, Peter T. Fox, Simon B. Eickhoff
Veröffentlicht in: Neuroscience & Biobehavioral Reviews, Ausgabe 68, 2016, Seite(n) 256-269, ISSN 0149-7634
Herausgeber: Pergamon Press Ltd.
DOI: 10.1016/j.neubiorev.2016.05.012

A neural circuit encoding sexual preference in humans

Autoren: Timm B. Poeppl, Berthold Langguth, Rainer Rupprecht, Angela R. Laird, Simon B. Eickhoff
Veröffentlicht in: Neuroscience & Biobehavioral Reviews, Ausgabe 68, 2016, Seite(n) 530-536, ISSN 0149-7634
Herausgeber: Pergamon Press Ltd.
DOI: 10.1016/j.neubiorev.2016.06.025

Formal Models of the Network Co-occurrence Underlying Mental Operations

Autoren: Danilo Bzdok, Gaël Varoquaux, Olivier Grisel, Michael Eickenberg, Cyril Poupon, Bertrand Thirion
Veröffentlicht in: PLOS Computational Biology, Ausgabe 12/6, 2016, Seite(n) e1004994, ISSN 1553-7358
Herausgeber: Public Library of Science (PLoS)
DOI: 10.1371/journal.pcbi.1004994

The Virtual Epileptic Patient: Individualized whole-brain models of epilepsy spread

Autoren: V.K. Jirsa, T. Proix, D. Perdikis, M.M. Woodman, H. Wang, J. Gonzalez-Martinez, C. Bernard, C. Bénar, M. Guye, P. Chauvel, F. Bartolomei
Veröffentlicht in: NeuroImage, Ausgabe 145, 2017, Seite(n) 377-388, ISSN 1053-8119
Herausgeber: Academic Press
DOI: 10.1016/j.neuroimage.2016.04.049

Synchronous Spike Patterns in Macaque Motor Cortex during an Instructed-Delay Reach-to-Grasp Task

Autoren: E. Torre, P. Quaglio, M. Denker, T. Brochier, A. Riehle, S. Grun
Veröffentlicht in: Journal of Neuroscience, Ausgabe 36/32, 2016, Seite(n) 8329-8340, ISSN 0270-6474
Herausgeber: Society for Neuroscience
DOI: 10.1523/JNEUROSCI.4375-15.2016

Handling Metadata in a Neurophysiology Laboratory

Autoren: Lyuba Zehl, Florent Jaillet, Adrian Stoewer, Jan Grewe, Andrey Sobolev, Thomas Wachtler, Thomas G. Brochier, Alexa Riehle, Michael Denker, Sonja Grün
Veröffentlicht in: Frontiers in Neuroinformatics, Ausgabe 10, 2016, ISSN 1662-5196
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fninf.2016.00026

ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains

Autoren: Emiliano Torre, Carlos Canova, Michael Denker, George Gerstein, Moritz Helias, Sonja Grün
Veröffentlicht in: PLOS Computational Biology, Ausgabe 12/7, 2016, Seite(n) e1004939, ISSN 1553-7358
Herausgeber: Public Library of Science (PLoS)
DOI: 10.1371/journal.pcbi.1004939

Seeing it all: Convolutional network layers map the function of the human visual system

Autoren: Michael Eickenberg, Alexandre Gramfort, Gaël Varoquaux, Bertrand Thirion
Veröffentlicht in: NeuroImage, Ausgabe 152, 2017, Seite(n) 184-194, ISSN 1053-8119
Herausgeber: Academic Press
DOI: 10.1016/j.neuroimage.2016.10.001

[Re] Cellular and Network Mechanisms of Slow Oscillatory Activity (<1 Hz) and Wave Propagations in a Cortical Network Model

Autoren: Maksimov A, van Albada S, Diesmann M
Veröffentlicht in: Rescience, 2016, ISSN 2430-3658
Herausgeber: Rescience
DOI: 10.5281/zenodo.161526

Exploring the Usefulness of Formal Concept Analysis for Robust Detection of Spatio-temporal Spike Patterns in Massively Parallel Spike Trains

Autoren: Alper Yegenoglu, Pietro Quaglio, Emiliano Torre, Sonja Grün, Dominik Endres
Veröffentlicht in: Graph-Based Representation and Reasoning, 2016, Seite(n) 3-16, ISSN 0302-9743
Herausgeber: Springer Verlag
DOI: 10.1007/978-3-319-40985-6_1

The Spinal Cord Has an Intrinsic System for the Control of pH

Autoren: Elham Jalalvand, Brita Robertson, Hervé Tostivint, Peter Wallén, Sten Grillner
Veröffentlicht in: Current Biology, Ausgabe 26/10, 2016, Seite(n) 1346-1351, ISSN 0960-9822
Herausgeber: Cell Press
DOI: 10.1016/j.cub.2016.03.048

Embodied neurology: an integrative framework for neurological disorders

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Big Science, Brain Simulation, and Neuroethics

Autoren: Michele Farisco, Kathinka Evers, Arleen Salles
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Premature changes in neuronal excitability account for hippocampal network impairment and autistic-like behavior in neonatal BTBR T+tf/J mice

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Searching for principles of brain computation

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The laminar integration of sensory inputs with feedback signals in human cortex

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Veröffentlicht in: Brain and Cognition, Ausgabe 112, 2017, Seite(n) 54-57, ISSN 0278-2626
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Worldwide initiatives to advance brain research

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Benchmarking Spike-Based Visual Recognition: A Dataset and Evaluation

Autoren: Qian Liu, Garibaldi Pineda-García, Evangelos Stromatias, Teresa Serrano-Gotarredona, Steve B. Furber
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Active subthreshold dendritic conductances shape the local field potential

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Texture Segregation Causes Early Figure Enhancement and Later Ground Suppression in Areas V1 and V4 of Visual Cortex

Autoren: Jasper Poort, Matthew W. Self, Bram van Vugt, Hemi Malkki, Pieter R. Roelfsema
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Dendritic-branching angles of pyramidal neurons of the human cerebral cortex

Autoren: Pablo Fernandez-Gonzalez, Ruth Benavides-Piccione, Ignacio Leguey, Concha Bielza, Pedro Larrañaga, Javier DeFelipe
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Comments and General Discussion on “The Anatomical Problem Posed by Brain Complexity and Size: A Potential Solution”

Autoren: Javier DeFelipe, Rodney J. Douglas, Sean L. Hill, Ed S. Lein, Kevan A. C. Martin, Kathleen S. Rockland, Idan Segev, Gordon M. Shepherd, Gábor Tamás
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Shining Light on an mGlu5 Photoswitchable NAM: A Theoretical Perspective

Autoren: James A.R. Dalton, Isaias Lans, Xavier Rovira, Fanny Malhaire, Xavier Gómez-Santacana, Silvia Pittolo, Pau Gorostiza, Amadeu Llebaria, Cyril Goudet, Jean-Philippe Pin, Jesús Giraldo
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Properties and dynamics of inhibitory synaptic communication within the CA3 microcircuits of pyramidal cells and interneurons expressing parvalbumin or cholecystokinin

Autoren: Z. Kohus, S. Káli, L. Rovira-Esteban, D. Schlingloff, O. Papp, T. F. Freund, N. Hájos, A. I. Gulyás
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Spatiotemporal interplay between multisensory excitation and recruited inhibition in the lamprey optic tectum

Autoren: Andreas A Kardamakis, Juan Pérez-Fernández, Sten Grillner
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Comparative electrostatic analysis of adenylyl cyclase for isoform dependent regulation properties

Autoren: Rudi Tong, Rebecca C. Wade, Neil J. Bruce
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Role of DARPP-32 and ARPP-21 in the Emergence of Temporal Constraints on Striatal Calcium and Dopamine Integration

Autoren: Anu G. Nair, Upinder S. Bhalla, Jeanette Hellgren Kotaleski
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A Framework for Coupled Simulations of Robots and Spiking Neuronal Networks

Autoren: Georg Hinkel, Henning Groenda, Sebastian Krach, Lorenzo Vannucci, Oliver Denninger, Nino Cauli, Stefan Ulbrich, Arne Roennau, Egidio Falotico, Marc-Oliver Gewaltig, Alois Knoll, Rüdiger Dillmann, Cecilia Laschi, Ralf Reussner
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Neural Activity Elicited by a Cognitive Task can be Detected in Single-Trials with Simultaneous Intracerebral EEG-fMRI Recordings

Autoren: Mani Saignavongs, Carolina Ciumas, Mathilde Petton, Romain Bouet, Sébastien Boulogne, Sylvain Rheims, David W. Carmichael, Jean-Philippe Lachaux, Philippe Ryvlin
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OptoGluNAM4.1, a Photoswitchable Allosteric Antagonist for Real-Time Control of mGlu4 Receptor Activity

Autoren: Xavier Rovira, Ana Trapero, Silvia Pittolo, Charleine Zussy, Adèle Faucherre, Chris Jopling, Jesús Giraldo, Jean-Philippe Pin, Pau Gorostiza, Cyril Goudet, Amadeu Llebaria
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Optical control of endogenous receptors and cellular excitability using targeted covalent photoswitches

Autoren: Mercè Izquierdo-Serra, Antoni Bautista-Barrufet, Ana Trapero, Aida Garrido-Charles, Ariadna Díaz-Tahoces, Nuria Camarero, Silvia Pittolo, Sergio Valbuena, Ariadna Pérez-Jiménez, Marina Gay, Alejandro García-Moll, Carles Rodríguez-Escrich, Juan Lerma, Pedro de la Villa, Eduardo Fernández, Miquel À Pericàs, Amadeu Llebaria, Pau Gorostiza
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Autoren: David Dahmen, Hannah Bos, Moritz Helias
Veröffentlicht in: Physical Review X, Ausgabe 6/3, 2016, ISSN 2160-3308
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FHF-independent conduction of action potentials along the leak-resistant cerebellar granule cell axon

Autoren: Katarzyna Dover, Christopher Marra, Sergio Solinas, Marko Popovic, Sathyaa Subramaniyam, Dejan Zecevic, Egidio D’Angelo, Mitchell Goldfarb
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Learning maximum entropy models from finite-size data sets: A fast data-driven algorithm allows sampling from the posterior distribution

Autoren: Ulisse Ferrari
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Optimizing Network Traffic for Spiking Neural Network Simulations on Densely Interconnected Many-Core Neuromorphic Platforms

Autoren: Gianvito Urgese, Francesco Barchi, Enrico Macii, Andrea Acquaviva
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PSD95 nanoclusters are postsynaptic building blocks in hippocampus circuits

Autoren: Matthew J. Broadhead, Mathew H. Horrocks, Fei Zhu, Leila Muresan, Ruth Benavides-Piccione, Javier DeFelipe, David Fricker, Maksym V. Kopanitsa, Rory R. Duncan, David Klenerman, Noboru H. Komiyama, Steven F. Lee, Seth G. N. Grant
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BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience

Autoren: Werner Van Geit, Michael Gevaert, Giuseppe Chindemi, Christian Rössert, Jean-Denis Courcol, Eilif B. Muller, Felix Schürmann, Idan Segev, Henry Markram
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Efficient Integration of Coupled Electrical-Chemical Systems in Multiscale Neuronal Simulations

Autoren: Ekaterina Brocke, Upinder S. Bhalla, Mikael Djurfeldt, Jeanette Hellgren Kotaleski, Michael Hanke
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Oscillation-Driven Spike-Timing Dependent Plasticity Allows Multiple Overlapping Pattern Recognition in Inhibitory Interneuron Networks

Autoren: Jesús A. Garrido, Niceto R. Luque, Silvia Tolu, Egidio D’Angelo
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Identifying Anatomical Origins of Coexisting Oscillations in the Cortical Microcircuit

Autoren: Hannah Bos, Markus Diesmann, Moritz Helias
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Computational Modeling of Single Neuron Extracellular Electric Potentials and Network Local Field Potentials using LFPsim

Autoren: Harilal Parasuram, Bipin Nair, Egidio D'Angelo, Michael Hines, Giovanni Naldi, Shyam Diwakar
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Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON

Autoren: William W. Lytton, Alexandra H. Seidenstein, Salvador Dura-Bernal, Robert A. McDougal, Felix Schürmann, Michael L. Hines
Veröffentlicht in: Neural Computation, Ausgabe 28/10, 2016, Seite(n) 2063-2090, ISSN 0899-7667
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Proactive epigenesis and ethical innovation

Autoren: Kathinka Evers, Jean‐Pierre Changeux
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The Basal Ganglia Over 500 Million Years

Autoren: Sten Grillner, Brita Robertson
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Consciousness and cortical responsiveness: a within-state study during non-rapid eye movement sleep

Autoren: Jaakko O. Nieminen, Olivia Gosseries, Marcello Massimini, Elyana Saad, Andrew D. Sheldon, Melanie Boly, Francesca Siclari, Bradley R. Postle, Giulio Tononi
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A General Procedure to Study Subcellular Models of Transsynaptic Signaling at Inhibitory Synapses

Autoren: Carmen A. Lupascu, Annunziato Morabito, Elisabetta Merenda, Silvia Marinelli, Cristina Marchetti, Rosanna Migliore, Enrico Cherubini, Michele Migliore
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Serial grouping of 2D-image regions with object-based attention in humans

Autoren: Danique Jeurissen, Matthew W Self, Pieter R Roelfsema
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Stratification of unresponsive patients by an independently validated index of brain complexity

Autoren: Silvia Casarotto, Angela Comanducci, Mario Rosanova, Simone Sarasso, Matteo Fecchio, Martino Napolitani, Andrea Pigorini, Adenauer G. Casali, Pietro D. Trimarchi, Melanie Boly, Olivia Gosseries, Olivier Bodart, Francesco Curto, Cristina Landi, Maurizio Mariotti, Guya Devalle, Steven Laureys, Giulio Tononi, Marcello Massimini
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Synapse-Centric Mapping of Cortical Models to the SpiNNaker Neuromorphic Architecture

Autoren: James C. Knight, Steve B. Furber
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Neurotechnological assessment of consciousness disorders: five ethical imperatives

Autoren: Evers K
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Supervised Learning in Spiking Neural Networks for Precise Temporal Encoding

Autoren: Brian Gardner, André Grüning
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From Neuron Biophysics to Orientation Selectivity in Electrically Coupled Networks of Neocortical L2/3 Large Basket Cells

Autoren: Oren Amsalem, Werner Van Geit, Eilif Muller, Henry Markram, Idan Segev
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The Human Brain Project: Parallel technologies for biologically accurate simulation of Granule cells

Autoren: Giordana Florimbi, Emanuele Torti, Stefano Masoli, Egidio D'Angelo, Giovanni Danese, Francesco Leporati
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The Effects of Realistic Synaptic Distribution and 3D Geometry on Signal Integration and Extracellular Field Generation of Hippocampal Pyramidal Cells and Inhibitory Neurons

Autoren: Attila I. Gulyás, Tamás F. Freund, Szabolcs Káli
Veröffentlicht in: Frontiers in Neural Circuits, Ausgabe 10, 2016, ISSN 1662-5110
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Modeling the Cerebellar Microcircuit: New Strategies for a Long-Standing Issue

Autoren: Egidio D’Angelo, Alberto Antonietti, Stefano Casali, Claudia Casellato, Jesus A. Garrido, Niceto Rafael Luque, Lisa Mapelli, Stefano Masoli, Alessandra Pedrocchi, Francesca Prestori, Martina Francesca Rizza, Eduardo Ros
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Functional Relevance of Different Basal Ganglia Pathways Investigated in a Spiking Model with Reward Dependent Plasticity

Autoren: Pierre Berthet, Mikael Lindahl, Philip J. Tully, Jeanette Hellgren-Kotaleski, Anders Lansner
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The Number of Genomic Copies at the 16p11.2 Locus Modulates Language, Verbal Memory, and Inhibition

Autoren: Loyse Hippolyte, Anne M. Maillard, Borja Rodriguez-Herreros, Aurélie Pain, Sandra Martin-Brevet, Carina Ferrari, Philippe Conus, Aurélien Macé, Nouchine Hadjikhani, Andres Metspalu, Anu Reigo, Anneli Kolk, Katrin Männik, Mandy Barker, Bertrand Isidor, Cédric Le Caignec, Cyril Mignot, Laurence Schneider, Laurent Mottron, Boris Keren, Albert David, Martine Doco-Fenzy, Marion Gérard, Raphael Be
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Neurobiological origin of spurious brain morphological changes: A quantitative MRI study

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The contribution of neuroethics to international brain research initiatives

Autoren: Kathinka Evers
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The pretectal connectome in lamprey

Autoren: Lorenza Capantini, Arndt von Twickel, Brita Robertson, Sten Grillner
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Data Publications Correlate with Citation Impact

Autoren: Florian Leitner, Concha Bielza, Sean L. Hill, Pedro Larrañaga
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Early Visual Cortex as a Multiscale Cognitive Blackboard

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Effect of Heterogeneity on Decorrelation Mechanisms in Spiking Neural Networks: A Neuromorphic-Hardware Study

Autoren: Thomas Pfeil, Jakob Jordan, Tom Tetzlaff, Andreas Grübl, Johannes Schemmel, Markus Diesmann, Karlheinz Meier
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Microstructural proliferation in human cortex is coupled with the development of face processing

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Effect of Ionic Diffusion on Extracellular Potentials in Neural Tissue

Autoren: Geir Halnes, Tuomo Mäki-Marttunen, Daniel Keller, Klas H. Pettersen, Ole A. Andreassen, Gaute T. Einevoll
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Best practices in data analysis and sharing in neuroimaging using MRI

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The neural basis of sex differences in sexual behavior: A quantitative meta-analysis

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The Human Brain Project: Creating a European Research Infrastructure to Decode the Human Brain

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Active cortical dendrites modulate perception

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Topographic organization of the cerebral cortex and brain cartography

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Multimodal evaluation of the amygdala's functional connectivity

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Understanding the brain through large, multidisciplinary research initiatives

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The heterogeneity of the left dorsal premotor cortex evidenced by multimodal connectivity-based parcellation and functional characterization

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Altered Brain Activity in Unipolar Depression Revisited

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Evidence for three genetic loci involved in both anorexia nervosa risk and variation of body mass index

Autoren: A Hinney, M Kesselmeier, S Jall, A-L Volckmar, M Föcker, J Antel, Vesna Boraska Perica, Christopher S Franklin, James A B Floyd, Laura M Thornton, Laura M Huckins, Lorraine Southam, N William Rayner, Ioanna Tachmazidou, Kelly L Klump, Janet Treasure, Cathryn M Lewis, Ulrike Schmidt, Federica Tozzi, Kirsty iezebrink, Johannes Hebebrand, Philip Gorwood, Roger A H Adan, Martien J H Kas, Angela Favar
Veröffentlicht in: Molecular Psychiatry, Ausgabe 22/2, 2016, Seite(n) 192-201, ISSN 1359-4184
Herausgeber: Nature Publishing Group
DOI: 10.1038/mp.2016.71

Identification of rare variants in KCTD13 at the schizophrenia risk locus 16p11.2

Autoren: Franziska Degenhardt, Barbara Heinemann, Jana Strohmaier, Marvin A. Pfohl, Ina Giegling, Andrea Hofmann, Kerstin U. Ludwig, Stephanie H. Witt, Michael Ludwig, Andreas J. Forstner, Margot Albus, Sibylle G. Schwab, Margitta Borrmann-Hassenbach, Leonard Lennertz, Michael Wagner, Per Hoffmann, Dan Rujescu, Wolfgang Maier, Sven Cichon, Marcella Rietschel, Markus M. Nöthen
Veröffentlicht in: Psychiatric Genetics, Ausgabe 26/6, 2016, Seite(n) 293-296, ISSN 0955-8829
Herausgeber: Lippincott Williams & Wilkins Ltd.
DOI: 10.1097/YPG.0000000000000145

Self-Grounded Vision: Hand Ownership Modulates Visual Location through Cortical β and γ Oscillations

Autoren: Nathan Faivre, Jonathan Dönz, Michele Scandola, Herberto Dhanis, Javier Bello Ruiz, Fosco Bernasconi, Roy Salomon, Olaf Blanke
Veröffentlicht in: The Journal of Neuroscience, Ausgabe 37/1, 2017, Seite(n) 11-22, ISSN 0270-6474
Herausgeber: Society for Neuroscience
DOI: 10.1523/JNEUROSCI.0563-16.2017

Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome

Autoren: Jannis Schuecker, Maximilian Schmidt, Sacha J. van Albada, Markus Diesmann, Moritz Helias
Veröffentlicht in: PLOS Computational Biology, Ausgabe 13/2, 2017, Seite(n) e1005179, ISSN 1553-7358
Herausgeber: Public Library of Science (PLoS)
DOI: 10.1371/journal.pcbi.1005179

Reproducibility of superficial white matter tracts using diffusion-weighted imaging tractography

Autoren: Miguel Guevara, Claudio Román, Josselin Houenou, Delphine Duclap, Cyril Poupon, Jean François Mangin, Pamela Guevara
Veröffentlicht in: NeuroImage, Ausgabe 147, 2017, Seite(n) 703-725, ISSN 1053-8119
Herausgeber: Academic Press
DOI: 10.1016/j.neuroimage.2016.11.066

Influence of age and cognitive performance on resting-state brain networks of older adults in a population-based cohort

Autoren: Christiane Jockwitz, Svenja Caspers, Silke Lux, Simon B. Eickhoff, Kerstin Jütten, Stefan Lenzen, Susanne Moebus, Noreen Pundt, Andrew Reid, Felix Hoffstaedter, Karl-Heinz Jöckel, Raimund Erbel, Sven Cichon, Markus M. Nöthen, N. Jon Shah, Karl Zilles, Katrin Amunts
Veröffentlicht in: Cortex, Ausgabe 89, 2017, Seite(n) 28-44, ISSN 0010-9452
Herausgeber: Masson Publishing
DOI: 10.1016/j.cortex.2017.01.008

Self-induced intracerebral gamma oscillations in the human cortex

Autoren: Juliana Corlier, Daphné Rimsky-Robert, Mario Valderrama, Katia Lehongre, Claude Adam, Stéphane Clémenceau, Stéphane Charpier, Julien Bastin, Philippe Kahane, Jean-Philippe Lachaux, Vincent Navarro, Michel Le Van Quyen
Veröffentlicht in: Brain, Ausgabe 139/12, 2016, Seite(n) 3084-3091, ISSN 0006-8950
Herausgeber: Oxford University Press
DOI: 10.1093/brain/aww246

The Cytoarchitecture of Domain-specific Regions in Human High-level Visual Cortex

Autoren: Kevin S. Weiner, Michael A. Barnett, Simon Lorenz, Julian Caspers, Anthony Stigliani, Katrin Amunts, Karl Zilles, Bruce Fischl, Kalanit Grill-Spector
Veröffentlicht in: Cerebral Cortex, Ausgabe 27/1, 2016, Seite(n) 146-161, ISSN 1047-3211
Herausgeber: Oxford University Press
DOI: 10.1093/cercor/bhw361

Exome chip analyses in adult attention deficit hyperactivity disorder

Autoren: T Zayats, K K Jacobsen, R Kleppe, C P Jacob, S Kittel-Schneider, M Ribasés, J A Ramos-Quiroga, V Richarte, M Casas, N R Mota, E H Grevet, M Klein, J Corominas, J Bralten, T Galesloot, A A Vasquez, S Herms, A J Forstner, H Larsson, G Breen, P Asherson, S Gross-Lesch, K P Lesch, S Cichon, M B Gabrielsen, O L Holmen, C H D Bau, J Buitelaar, L Kiemeney, S V Faraone, B Cormand, B Franke, A Reif, J Haa
Veröffentlicht in: Translational Psychiatry, Ausgabe 6/10, 2016, Seite(n) e923, ISSN 2158-3188
Herausgeber: Nature Publishing Group
DOI: 10.1038/tp.2016.196

Semi-supervised classification trees

Autoren: Jurica Levatić, Michelangelo Ceci, Dragi Kocev, Sašo Džeroski
Veröffentlicht in: Journal of Intelligent Information Systems, 2017, ISSN 0925-9902
Herausgeber: Kluwer Academic Publishers
DOI: 10.1007/s10844-017-0457-4

Large-scale neuromorphic computing systems

Autoren: Steve Furber
Veröffentlicht in: Journal of Neural Engineering, Ausgabe 13/5, 2016, Seite(n) 051001, ISSN 1741-2560
Herausgeber: Institute of Physics Publishing
DOI: 10.1088/1741-2560/13/5/051001

Multi-label classification via multi-target regression on data streams

Autoren: Aljaž Osojnik, Panče Panov, Sašo Džeroski
Veröffentlicht in: Machine Learning, Ausgabe 106/6, 2017, Seite(n) 745-770, ISSN 0885-6125
Herausgeber: Kluwer Academic Publishers
DOI: 10.1007/s10994-016-5613-5

Yeasts and yeast-like fungi in tap water and groundwater, and their transmission to household appliances

Autoren: Monika Novak Babič, Polona Zalar, Bernard Ženko, Sašo Džeroski, Nina Gunde-Cimerman
Veröffentlicht in: Fungal Ecology, Ausgabe 20, 2016, Seite(n) 30-39, ISSN 1754-5048
Herausgeber: Elsevier BV
DOI: 10.1016/j.funeco.2015.10.001

Refinement and selection heuristics in subgroup discovery and classification rule learning

Autoren: Anita Valmarska, Nada Lavrač, Johannes Fürnkranz, Marko Robnik-Šikonja
Veröffentlicht in: Expert Systems with Applications, Ausgabe 81, 2017, Seite(n) 147-162, ISSN 0957-4174
Herausgeber: Pergamon Press Ltd.
DOI: 10.1016/j.eswa.2017.03.041

Designing Workflows for the Reproducible Analysis of Electrophysiological Data

Autoren: Michael Denker, Sonja Grün
Veröffentlicht in: BrainComp 2015: Brain-Inspired Computing, 2016, Seite(n) 58-72
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-50862-7_5

ClowdFlows: Online workflows for distributed big data mining

Autoren: Janez Kranjc, Roman Orač, Vid Podpečan, Nada Lavrač, Marko Robnik-Šikonja
Veröffentlicht in: Future Generation Computer Systems, Ausgabe 68, 2017, Seite(n) 38-58, ISSN 0167-739X
Herausgeber: Elsevier BV
DOI: 10.1016/j.future.2016.07.018

HINMINE: heterogeneous information network mining with information retrieval heuristics

Autoren: Jan Kralj, Marko Robnik-Šikonja, Nada Lavrač
Veröffentlicht in: Journal of Intelligent Information Systems, 2017, ISSN 0925-9902
Herausgeber: Kluwer Academic Publishers
DOI: 10.1007/s10844-017-0444-9

Selective TMS-induced modulation of functional connectivity correlates with changes in behavior

Autoren: Puiu F. Balan, Annelies Gerits, Dante Mantini, Wim Vanduffel
Veröffentlicht in: NeuroImage, Ausgabe 149, 2017, Seite(n) 361-378, ISSN 1053-8119
Herausgeber: Academic Press
DOI: 10.1016/j.neuroimage.2017.01.076

Modeling dynamical systems with data stream mining

Autoren: Aljaz Osojnik, Pance Panov, Saso Dzeroski
Veröffentlicht in: Computer Science and Information Systems, Ausgabe 13/2, 2016, Seite(n) 453-473, ISSN 1820-0214
Herausgeber: ComSIS Consortium
DOI: 10.2298/CSIS150518009O

Neurorobotics: A strategic pillar of the Human Brain Project

Autoren: Alois Knoll and Marc-Oliver Gewaltig
Veröffentlicht in: Brain-inspired intelligent robotics: The intersection of robotics and neuroscience, 2016
Herausgeber: Science AAAS

25th Annual Computational Neuroscience Meeting: CNS-2016

Autoren: Tatyana O. Sharpee, Alain Destexhe, Mitsuo Kawato, Vladislav Sekulić, Frances K. Skinner, Daniel K. Wójcik, Chaitanya Chintaluri, Dorottya Cserpán, Zoltán Somogyvári, Jae Kyoung Kim, Zachary P. Kilpatrick, Matthew R. Bennett, Kresimir Josić, Irene Elices, David Arroyo, Rafael Levi, Francisco B. Rodriguez, Pablo Varona, Eunjin Hwang, Bowon Kim, Hio-Been Han, Tae Kim, James T. McKenna, Ritchie
Veröffentlicht in: BMC Neuroscience, Ausgabe 17/S1, 2016, ISSN 1471-2202
Herausgeber: BioMed Central
DOI: 10.1186/s12868-016-0283-6

Closed Loop Interactions between Spiking Neural Network and Robotic Simulators Based on MUSIC and ROS

Autoren: Philipp Weidel, Mikael Djurfeldt, Renato C. Duarte, Abigail Morrison
Veröffentlicht in: Frontiers in Neuroinformatics, Ausgabe 10, 2016, ISSN 1662-5196
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fninf.2016.00031

Ontology Engineering: From an Art to a Craft

Autoren: Larisa Soldatova, Panče Panov, Sašo Džeroski
Veröffentlicht in: OWLED 2015: Ontology Engineering, 2016, Seite(n) 174-181
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-33245-1_18

Decoding Grasping Movements from the Parieto-Frontal Reaching Circuit in the Nonhuman Primate

Autoren: Koen Nelissen, Prosper Agbesi Fiave, Wim Vanduffel
Veröffentlicht in: Cerebral Cortex, 2017, Seite(n) 1-15, ISSN 1047-3211
Herausgeber: Oxford University Press
DOI: 10.1093/cercor/bhx037

Learning Ensembles of Process-Based Models by Bagging of Random Library Samples

Autoren: Nikola Simidjievski, Ljupčo Todorovski, Sašo Džeroski
Veröffentlicht in: DS 2016: Discovery Science, 2016, Seite(n) 245-260
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-46307-0_16

Demonstrating Hybrid Learning in a Flexible Neuromorphic Hardware System

Autoren: Simon Friedmann, Johannes Schemmel, Andreas Grubl, Andreas Hartel, Matthias Hock, Karlheinz Meier
Veröffentlicht in: IEEE Transactions on Biomedical Circuits and Systems, Ausgabe 11/1, 2017, Seite(n) 128-142, ISSN 1932-4545
Herausgeber: Institute of Electrical and Electronics Engineers
DOI: 10.1109/TBCAS.2016.2579164

Homogeneous clusters of Alzheimer’s disease patient population

Autoren: Dragan Gamberger, Bernard Ženko, Alexis Mitelpunkt, Nada Lavrač
Veröffentlicht in: BioMedical Engineering OnLine, Ausgabe 15/S1, 2016, ISSN 1475-925X
Herausgeber: BioMed Central
DOI: 10.1186/s12938-016-0183-0

Energy-efficient neural network chips approach human recognition capabilities

Autoren: Wolfgang Maass
Veröffentlicht in: Proceedings of the National Academy of Sciences, Ausgabe 113/41, 2016, Seite(n) 11387-11389, ISSN 0027-8424
Herausgeber: National Academy of Sciences
DOI: 10.1073/pnas.1614109113

Comparison of Tree-Based Methods for Multi-target Regression on Data Streams

Autoren: Aljaž Osojnik, Panče Panov, Sašo Džeroski
Veröffentlicht in: NFMCP 2015: New Frontiers in Mining Complex Patterns, 2016, Seite(n) 17-31
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-39315-5_2

Effective Connectivity Reveals Largely Independent Parallel Networks of Face and Body Patches

Autoren: Elsie Premereur, Jessica Taubert, Peter Janssen, Rufin Vogels, Wim Vanduffel
Veröffentlicht in: Current Biology, Ausgabe 26/24, 2016, Seite(n) 3269-3279, ISSN 0960-9822
Herausgeber: Cell Press
DOI: 10.1016/j.cub.2016.09.059

Option Predictive Clustering Trees for Multi-target Regression

Autoren: Aljaž Osojnik, Sašo Džeroski, Dragi Kocev
Veröffentlicht in: DS 2016: Discovery Science, 2016, Seite(n) 118-133
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-46307-0_8

Fast Predictive Handshaking in Synchronous FPGAs for Fully Asynchronous Multisymbol Chip Links: Application to SpiNNaker 2-of-7 Links

Autoren: Amirreza Yousefzadeh, Luis A. Plana, Steve Temple, Teresa Serrano-Gotarredona, Steve B. Furber, Bernabe Linares-Barranco
Veröffentlicht in: IEEE Transactions on Circuits and Systems II: Express Briefs, Ausgabe 63/8, 2016, Seite(n) 763-767, ISSN 1549-7747
Herausgeber: Institute of Electrical and Electronics Engineers
DOI: 10.1109/TCSII.2016.2531092

Microprocessors: the engines of the digital age

Autoren: Steve Furber
Veröffentlicht in: Proceedings of the Royal Society A: Mathematical, Physical and Engineering Science, Ausgabe 473/2199, 2017, Seite(n) 20160893, ISSN 1364-5021
Herausgeber: Royal Society of London
DOI: 10.1098/rspa.2016.0893

Process-based design of dynamical biological systems

Autoren: Jovan Tanevski, Ljupčo Todorovski, Sašo Džeroski
Veröffentlicht in: Scientific Reports, Ausgabe 6/1, 2016, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/srep34107

Effects of Calcium Spikes in the Layer 5 Pyramidal Neuron on Coincidence Detection and Activity Propagation

Autoren: Yansong Chua, Abigail Morrison
Veröffentlicht in: Frontiers in Computational Neuroscience, Ausgabe 10, 2016, ISSN 1662-5188
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fncom.2016.00076

Functional complexity emerging from anatomical constraints in the brain: the significance of network modularity and rich-clubs

Autoren: Gorka Zamora-López, Yuhan Chen, Gustavo Deco, Morten L. Kringelbach, Changsong Zhou
Veröffentlicht in: Scientific Reports, Ausgabe 6/1, 2016, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/srep38424

Connecting Artificial Brains to Robots in a Comprehensive Simulation Framework: The Neurorobotics Platform

Autoren: Egidio Falotico, Lorenzo Vannucci, Alessandro Ambrosano, Ugo Albanese, Stefan Ulbrich, Juan Camilo Vasquez Tieck, Georg Hinkel, Jacques Kaiser, Igor Peric, Oliver Denninger, Nino Cauli, Murat Kirtay, Arne Roennau, Gudrun Klinker, Axel Von Arnim, Luc Guyot, Daniel Peppicelli, Pablo Martínez-Cañada, Eduardo Ros, Patrick Maier, Sandro Weber, Manuel Huber, David Plecher, Florian Röhrbein, Stefan De
Veröffentlicht in: Frontiers in Neurorobotics, Ausgabe 11, 2017, ISSN 1662-5218
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fnbot.2017.00002

Climbing Brain Levels of Organisation from Genes to Consciousness

Autoren: Jean-Pierre Changeux
Veröffentlicht in: Trends in Cognitive Sciences, Ausgabe 21/3, 2017, Seite(n) 168-181, ISSN 1364-6613
Herausgeber: Elsevier BV
DOI: 10.1016/j.tics.2017.01.004

Musculoskeletal Robots: Scalability in Neural Control

Autoren: Christoph Richter, Soren Jentzsch, Rafael Hostettler, Jesus A. Garrido, Eduardo Ros, Alois Knoll, Florian Rohrbein, Patrick van der Smagt, Jorg Conradt
Veröffentlicht in: IEEE Robotics & Automation Magazine, Ausgabe 23/4, 2016, Seite(n) 128-137, ISSN 1070-9932
Herausgeber: Institute of Electrical and Electronics Engineers
DOI: 10.1109/MRA.2016.2535081

A Comparison of Different Data Transformation Approaches in the Feature Ranking Context

Autoren: Matej Petković, Panče Panov, Sašo Džeroski
Veröffentlicht in: DS 2016: Discovery Science, 2016, Seite(n) 310-324
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-46307-0_20

Self-training for multi-target regression with tree ensembles

Autoren: Jurica Levatić, Michelangelo Ceci, Dragi Kocev, Sašo Džeroski
Veröffentlicht in: Knowledge-Based Systems, Ausgabe 123, 2017, Seite(n) 41-60, ISSN 0950-7051
Herausgeber: Elsevier BV
DOI: 10.1016/j.knosys.2017.02.014

Speed hysteresis and noise shaping of traveling fronts in neural fields: role of local circuitry and nonlocal connectivity

Autoren: Cristiano Capone, Maurizio Mattia
Veröffentlicht in: Scientific Reports, Ausgabe 7, 2017, Seite(n) 39611, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/srep39611

Measures of metabolism and complexity in the brain of patients with disorders of consciousness

Autoren: Olivier Bodart, Olivia Gosseries, Sarah Wannez, Aurore Thibaut, Jitka Annen, Melanie Boly, Mario Rosanova, Adenauer G. Casali, Silvia Casarotto, Giulio Tononi, Marcello Massimini, Steven Laureys
Veröffentlicht in: NeuroImage: Clinical, Ausgabe 14, 2017, Seite(n) 354-362, ISSN 2213-1582
Herausgeber: Elsevier BV
DOI: 10.1016/j.nicl.2017.02.002

Impedance Spectrum in Cortical Tissue: Implications for Propagation of LFP Signals on the Microscopic Level

Autoren: Stéphanie Miceli, Torbjørn V. Ness, Gaute T. Einevoll, Dirk Schubert
Veröffentlicht in: eneuro, Ausgabe 4/1, 2017, Seite(n) ENEURO.0291-16.2016, ISSN 2373-2822
Herausgeber: Society for Neuroscience
DOI: 10.1523/ENEURO.0291-16.2016

Untangling Basal Ganglia Network Dynamics and Function: Role of Dopamine Depletion and Inhibition Investigated in a Spiking Network Model

Autoren: Mikael Lindahl, Jeanette Hellgren Kotaleski
Veröffentlicht in: eneuro, Ausgabe 3/6, 2016, Seite(n) ENEURO.0156-16.2016, ISSN 2373-2822
Herausgeber: Society for Neuroscience
DOI: 10.1523/ENEURO.0156-16.2016

Living well in the Neuropolis

Autoren: Des Fitzgerald, Nikolas Rose, Ilina Singh
Veröffentlicht in: The Sociological Review Monographs, Ausgabe 64/1, 2016, Seite(n) 221-237, ISSN 0081-1769
Herausgeber: Wiley online library
DOI: 10.1002/2059-7932.12022

Local recording of biological magnetic fields using Giant Magneto Resistance-based micro-probes

Autoren: Francesca Barbieri, Vincent Trauchessec, Laure Caruso, Josué Trejo-Rosillo, Bartosz Telenczuk, Elodie Paul, Thierry Bal, Alain Destexhe, Claude Fermon, Myriam Pannetier-Lecoeur, Gilles Ouanounou
Veröffentlicht in: Scientific Reports, Ausgabe 6/1, 2016, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/srep39330

Individual brain structure and modelling predict seizure propagation

Autoren: Timothée Proix, Fabrice Bartolomei, Maxime Guye, Viktor K. Jirsa
Veröffentlicht in: Brain, Ausgabe 140/3, 2017, Seite(n) 641-654, ISSN 0006-8950
Herausgeber: Oxford University Press
DOI: 10.1093/brain/awx004

Local field potentials primarily reflect inhibitory neuron activity in human and monkey cortex

Autoren: Bartosz Teleńczuk, Nima Dehghani, Michel Le Van Quyen, Sydney S. Cash, Eric Halgren, Nicholas G. Hatsopoulos, Alain Destexhe
Veröffentlicht in: Scientific Reports, Ausgabe 7, 2017, Seite(n) 40211, ISSN 2045-2322
Herausgeber: Nature Publishing Group
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Recent progress in multi-electrode spike sorting methods

Autoren: Baptiste Lefebvre, Pierre Yger, Olivier Marre
Veröffentlicht in: Journal of Physiology-Paris, 2017, ISSN 0928-4257
Herausgeber: Elsevier BV
DOI: 10.1016/j.jphysparis.2017.02.005

Reaction-diffusion-like formalism for plastic neural networks reveals dissipative solitons at criticality

Autoren: Dmytro Grytskyy, Markus Diesmann, Moritz Helias
Veröffentlicht in: Physical Review E, Ausgabe 93/6, 2016, ISSN 2470-0045
Herausgeber: Physical Review E
DOI: 10.1103/PhysRevE.93.062303

Tracking Dynamic Interactions Between Structural and Functional Connectivity: A TMS/EEG-dMRI Study

Autoren: Enrico Amico, Olivier Bodart, Mario Rosanova, Olivia Gosseries, Lizette Heine, Pieter Van Mierlo, Charlotte Martial, Marcello Massimini, Daniele Marinazzo, Steven Laureys
Veröffentlicht in: Brain Connectivity, Ausgabe 7/2, 2017, Seite(n) 84-97, ISSN 2158-0014
Herausgeber: Mary Ann Liebert Inc.
DOI: 10.1089/brain.2016.0462

Neurorobotics

Autoren: A. Knoll, F. Röhrbein, A. Kuhn, M. Akl, K. Sharma
Veröffentlicht in: Informatik-Spektrum, Ausgabe 40/2, 2017, Seite(n) 161-164, ISSN 0170-6012
Herausgeber: Springer Verlag
DOI: 10.1007/s00287-017-1031-8

Hopf bifurcation in a nonlocal nonlinear transport equation stemming from stochastic neural dynamics

Autoren: Audric Drogoul, Romain Veltz
Veröffentlicht in: Chaos: An Interdisciplinary Journal of Nonlinear Science, Ausgabe 27/2, 2017, Seite(n) 021101, ISSN 1054-1500
Herausgeber: American Institute of Physics
DOI: 10.1063/1.4976510

Function-structure connectivity in patients with severe brain injury as measured by MRI-DWI and FDG-PET

Autoren: J. Annen, L. Heine, E. Ziegler, G. Frasso, M. Bahri, C. Di Perri, J. Stender, C. Martial, S. Wannez, K. D'ostilio, E. Amico, G. Antonopoulos, C. Bernard, F. Tshibanda, R. Hustinx, S. Laureys
Veröffentlicht in: Human Brain Mapping, Ausgabe 37/11, 2016, Seite(n) 3707-3720, ISSN 1065-9471
Herausgeber: John Wiley & Sons Inc.
DOI: 10.1002/hbm.23269

Multiple Choice Neurodynamical Model of the Uncertain Option Task

Autoren: Andrea Insabato, Mario Pannunzi, Gustavo Deco
Veröffentlicht in: PLOS Computational Biology, Ausgabe 13/1, 2017, Seite(n) e1005250, ISSN 1553-7358
Herausgeber: International Society for Computational Biology (ISCB).
DOI: 10.1371/journal.pcbi.1005250

Power-law statistics and universal scaling in the absence of criticality

Autoren: Jonathan Touboul, Alain Destexhe
Veröffentlicht in: Physical Review E, Ausgabe 95/1, 2017, ISSN 2470-0045
Herausgeber: American Physical Society
DOI: 10.1103/PhysRevE.95.012413

Synaptic Correlates of Working Memory Capacity

Autoren: Yuanyuan Mi, Mikhail Katkov, Misha Tsodyks
Veröffentlicht in: Neuron, Ausgabe 93/2, 2017, Seite(n) 323-330, ISSN 0896-6273
Herausgeber: Cell Press
DOI: 10.1016/j.neuron.2016.12.004

Environmental factors linked to depression vulnerability are associated with altered cerebellar resting-state synchronization

Autoren: Aldo Córdova-Palomera, Cristian Tornador, Carles Falcón, Nuria Bargalló, Paolo Brambilla, Benedicto Crespo-Facorro, Gustavo Deco, Lourdes Fañanás
Veröffentlicht in: Scientific Reports, Ausgabe 6/1, 2016, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/srep37384

Reproducibility and Comparability of Computational Models for Astrocyte Calcium Excitability

Autoren: Tiina Manninen, Riikka Havela, Marja-Leena Linne
Veröffentlicht in: Frontiers in Neuroinformatics, Ausgabe 11, 2017, ISSN 1662-5196
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fninf.2017.00011

Hebbian plasticity requires compensatory processes on multiple timescales

Autoren: Friedemann Zenke, Wulfram Gerstner
Veröffentlicht in: Philosophical Transactions of the Royal Society B: Biological Sciences, Ausgabe 372/1715, 2017, Seite(n) 20160259, ISSN 0962-8436
Herausgeber: Royal Society of London
DOI: 10.1098/rstb.2016.0259

Hebbian Spike-Timing Dependent Plasticity at the Cerebellar Input Stage

Autoren: Martina Sgritta, Francesca Locatelli, Teresa Soda, Francesca Prestori, Egidio Ugo D'Angelo
Veröffentlicht in: The Journal of Neuroscience, Ausgabe 37/11, 2017, Seite(n) 2809-2823, ISSN 0270-6474
Herausgeber: Society for Neuroscience
DOI: 10.1523/JNEUROSCI.2079-16.2016

Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data

Autoren: Walid M. Abdelmoula, Benjamin Balluff, Sonja Englert, Jouke Dijkstra, Marcel J. T. Reinders, Axel Walch, Liam A. McDonnell, Boudewijn P. F. Lelieveldt
Veröffentlicht in: Proceedings of the National Academy of Sciences, Ausgabe 113/43, 2016, Seite(n) 12244-12249, ISSN 0027-8424
Herausgeber: National Academy of Sciences
DOI: 10.1073/pnas.1510227113

Controlled clinical trial of repeated prefrontal tDCS in patients with chronic minimally conscious state

Autoren: Aurore Thibaut, Sarah Wannez, Anne-Francoise Donneau, Camille Chatelle, Olivia Gosseries, Marie-Aurélie Bruno, Steven Laureys
Veröffentlicht in: Brain Injury, Ausgabe 31/4, 2017, Seite(n) 466-474, ISSN 0269-9052
Herausgeber: Taylor & Francis
DOI: 10.1080/02699052.2016.1274776

Single Neuron Optimization as a Basis for Accurate Biophysical Modeling: The Case of Cerebellar Granule Cells

Autoren: Stefano Masoli, Martina F. Rizza, Martina Sgritta, Werner Van Geit, Felix Schürmann, Egidio D'Angelo
Veröffentlicht in: Frontiers in Cellular Neuroscience, Ausgabe 11, 2017, ISSN 1662-5102
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fncel.2017.00071

Mass Cytometry of the Human Mucosal Immune System Identifies Tissue- and Disease-Associated Immune Subsets

Autoren: Vincent van Unen, Na Li, Ilse Molendijk, Mine Temurhan, Thomas Höllt, Andrea E. van der Meulen-de Jong, Hein W. Verspaget, M. Luisa Mearin, Chris J. Mulder, Jeroen van Bergen, Boudewijn P.F. Lelieveldt, Frits Koning
Veröffentlicht in: Immunity, Ausgabe 44/5, 2016, Seite(n) 1227-1239, ISSN 1074-7613
Herausgeber: Cell Press
DOI: 10.1016/j.immuni.2016.04.014

A Multiple-Plasticity Spiking Neural Network Embedded in a Closed-Loop Control System to Model Cerebellar Pathologies

Autoren: Alice Geminiani, Claudia Casellato, Alberto Antonietti, Egidio D’Angelo, Alessandra Pedrocchi
Veröffentlicht in: International Journal of Neural Systems, 2017, Seite(n) 1750017, ISSN 0129-0657
Herausgeber: World Scientific Publishing Co
DOI: 10.1142/S0129065717500174

Automated Ischemic Lesion Segmentation in MRI Mouse Brain Data after Transient Middle Cerebral Artery Occlusion

Autoren: Inge A. Mulder, Artem Khmelinskii, Oleh Dzyubachyk, Sebastiaan de Jong, Nathalie Rieff, Marieke J. H. Wermer, Mathias Hoehn, Boudewijn P. F. Lelieveldt, Arn M. J. M. van den Maagdenberg
Veröffentlicht in: Frontiers in Neuroinformatics, Ausgabe 11, 2017, ISSN 1662-5196
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fninf.2017.00003

Reducing GABAA-mediated inhibition improves forelimb motor function after focal cortical stroke in mice

Autoren: Claudia Alia, Cristina Spalletti, Stefano Lai, Alessandro Panarese, Silvestro Micera, Matteo Caleo
Veröffentlicht in: Scientific Reports, Ausgabe 6/1, 2016, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/srep37823

Detection of Conversion from Mild Cognitive Impairment to Alzheimer's Disease Using Longitudinal Brain MRI

Autoren: Zhuo Sun, Martijn van de Giessen, Boudewijn P. F. Lelieveldt, Marius Staring
Veröffentlicht in: Frontiers in Neuroinformatics, Ausgabe 11, 2017, ISSN 1662-5196
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fninf.2017.00016

Unbinding Kinetics of a p38 MAP Kinase Type II Inhibitor from Metadynamics Simulations

Autoren: Rodrigo Casasnovas, Vittorio Limongelli, Pratyush Tiwary, Paolo Carloni, Michele Parrinello
Veröffentlicht in: Journal of the American Chemical Society, Ausgabe 139/13, 2017, Seite(n) 4780-4788, ISSN 0002-7863
Herausgeber: American Chemical Society
DOI: 10.1021/jacs.6b12950

Density-based clustering: A ‘landscape view’ of multi-channel neural data for inference and dynamic complexity analysis

Autoren: Gabriel Baglietto, Guido Gigante, Paolo Del Giudice
Veröffentlicht in: PLOS ONE, Ausgabe 12/4, 2017, Seite(n) e0174918, ISSN 1932-6203
Herausgeber: Public Library of Science
DOI: 10.1371/journal.pone.0174918

Illuminating Phenylazopyridines To Photoswitch Metabotropic Glutamate Receptors: From the Flask to the Animals

Autoren: Xavier Gómez-Santacana, Silvia Pittolo, Xavier Rovira, Marc Lopez, Charleine Zussy, James A. R. Dalton, Adèle Faucherre, Chris Jopling, Jean-Philippe Pin, Francisco Ciruela, Cyril Goudet, Jesús Giraldo, Pau Gorostiza, Amadeu Llebaria
Veröffentlicht in: ACS Central Science, Ausgabe 3/1, 2017, Seite(n) 81-91, ISSN 2374-7943
Herausgeber: American Chemical Society (ACS)
DOI: 10.1021/acscentsci.6b00353

Random versus maximum entropy models of neural population activity

Autoren: Ulisse Ferrari, Tomoyuki Obuchi, Thierry Mora
Veröffentlicht in: Physical Review E, Ausgabe 95/4, 2017, ISSN 2470-0045
Herausgeber: American Physical Society
DOI: 10.1103/PhysRevE.95.042321

Autoren: Y. Mochizuki, T. Onaga, H. Shimazaki, T. Shimokawa, Y. Tsubo, R. Kimura, A. Saiki, Y. Sakai, Y. Isomura, S. Fujisawa, K.-i. Shibata, D. Hirai, T. Furuta, T. Kaneko, S. Takahashi, T. Nakazono, S. Ishino, Y. Sakurai, T. Kitsukawa, J. W. Lee, H. Lee, M. W. Jung, C. Babul, P. E. Maldonado, K. Takahashi, F. I. Arce-McShane, C. F. Ross, B. J. Sessle, N. G. Hatsopoulos, T. Brochier, A. Riehle, P. Chorley
Veröffentlicht in: Journal of Neuroscience, Ausgabe 36/21, 2016, Seite(n) 5736-5747, ISSN 0270-6474
Herausgeber: Society for Neuroscience
DOI: 10.1523/JNEUROSCI.0230-16.2016

Heterogeneous firing rate response of mouse layer V pyramidal neurons in the fluctuation-driven regime

Autoren: Y. Zerlaut, B. Teleńczuk, C. Deleuze, T. Bal, G. Ouanounou, A. Destexhe
Veröffentlicht in: The Journal of Physiology, Ausgabe 594/13, 2016, Seite(n) 3791-3808, ISSN 0022-3751
Herausgeber: Blackwell Publishing Inc.
DOI: 10.1113/JP272317

Neuron-Based Control Mechanisms for a Robotic Arm and Hand

Autoren: Nishant Singh, Christian Huyck, Vaibhav Gandhi, Alexander Jones
Veröffentlicht in: International Journal of Computer, Electrical, Automation, Control and Information Engineering, 2017, Seite(n) 175-179
Herausgeber: World Academy of Science, Engineering and Technology

Morphological Properties of Mass–Spring Networks for Optimal Locomotion Learning

Autoren: Gabriel Urbain, Jonas Degrave, Benonie Carette, Joni Dambre, Francis Wyffels
Veröffentlicht in: Frontiers in Neurorobotics, Ausgabe 11, 2017, ISSN 1662-5218
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fnbot.2017.00016

Enhanced Responsiveness and Low-Level Awareness in Stochastic Network States

Autoren: Yann Zerlaut, Alain Destexhe
Veröffentlicht in: Neuron, Ausgabe 94/5, 2017, Seite(n) 1002-1009, ISSN 0896-6273
Herausgeber: Cell Press
DOI: 10.1016/j.neuron.2017.04.001

Connectomic Analysis of Brain Networks: Novel Techniques and Future Directions

Autoren: J. Leonie Cazemier, Francisco Clascá, Paul H. E. Tiesinga
Veröffentlicht in: Frontiers in Neuroanatomy, Ausgabe 10, 2016, ISSN 1662-5129
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fnana.2016.00110

Neuroscience of Childhood Poverty: Evidence of Impacts and Mechanisms as Vehicles of Dialog With Ethics

Autoren: Sebastián J. Lipina, Kathinka Evers
Veröffentlicht in: Frontiers in Psychology, Ausgabe 8, 2017, ISSN 1664-1078
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fpsyg.2017.00061

Wiring Economy of Pyramidal Cells in the Juvenile Rat Somatosensory Cortex

Autoren: Laura Anton-Sanchez, Concha Bielza, Pedro Larrañaga, Javier DeFelipe
Veröffentlicht in: PLOS ONE, Ausgabe 11/11, 2016, Seite(n) e0165915, ISSN 1932-6203
Herausgeber: Public Library of Science
DOI: 10.1371/journal.pone.0165915

Mapping and Analysis of the Connectome of Sympathetic Premotor Neurons in the Rostral Ventrolateral Medulla of the Rat Using a Volumetric Brain Atlas

Autoren: Bowen Dempsey, Sheng Le, Anita Turner, Phil Bokiniec, Radhika Ramadas, Jan G. Bjaalie, Clement Menuet, Rachael Neve, Andrew M. Allen, Ann K. Goodchild, Simon McMullan
Veröffentlicht in: Frontiers in Neural Circuits, Ausgabe 11, 2017, ISSN 1662-5110
Herausgeber: Frontiers Research Foundation
DOI: 10.3389/fncir.2017.00009

The dynamics of resting fluctuations in the brain: metastability and its dynamical cortical core

Autoren: Gustavo Deco, Morten L. Kringelbach, Viktor K. Jirsa, Petra Ritter
Veröffentlicht in: Scientific Reports, Ausgabe 7/1, 2017, ISSN 2045-2322
Herausgeber: Nature Publishing Group
DOI: 10.1038/s41598-017-03073-5

Symmetry Breaking in Space-Time Hierarchies Shapes Brain Dynamics and Behavior

Autoren: Ajay S. Pillai, Viktor K. Jirsa
Veröffentlicht in: Neuron, Ausgabe 94/5, 2017, Seite(n) 1010-1026, ISSN 0896-6273
Herausgeber: Cell Press
DOI: 10.1016/j.neuron.2017.05.013

Assessment of antibody library diversity through next generation sequencing and technical error compensation

Autoren: Marco Fantini, Luca Pandolfini, Simonetta Lisi, Michele Chirichella, Ivan Arisi, Marco Terrigno, Martina Goracci, Federico Cremisi, Antonino Cattaneo
Veröffentlicht in: PLOS ONE, Ausgabe 12/5, 2017, Seite(n) e0177574, ISSN 1932-6203
Herausgeber: Public Library of Science
DOI: 10.1371/journal.pone.0177574

Memory Retrieval from First Principles

Autoren: M. Katkov, S. Romani, M. Tsodyks
Veröffentlicht in: Neuron, Ausgabe 94/5, 2017, Seite(n) 1027-1032, ISSN 0896-6273
Herausgeber: Cell Press
DOI: 10.1016/j.neuron.2017.03.048

Grand challenges for global brain sciences

Autoren: Grillner, S.
Veröffentlicht in: F1000Research, Ausgabe 5, 2016, Seite(n) 2873, ISSN 2046-1402
Herausgeber: F1000 Research Ltd.
DOI: 10.12688/f1000research.10025.1

The missing link: Predicting connectomes from noisy and partially observed tract tracing data

Autoren: Max Hinne, Annet Meijers, Rembrandt Bakker, Paul H. E. Tiesinga, Morten Mørup, Marcel A. J. van Gerven
Veröffentlicht in: PLOS Computational Biology, Ausgabe 13/1, 2017, Seite(n) e1005374, ISSN 1553-7358
Herausgeber: PLOS
DOI: 10.1371/journal.pcbi.1005374

Hierarchy of Information Processing in the Brain: A Novel ‘Intrinsic Ignition’ Framework

Autoren: Gustavo Deco, Morten L. Kringelbach
Veröffentlicht in: Neuron, Ausgabe 94/5, 2017, Seite(n) 961-968, ISSN 0896-6273
Herausgeber: Cell Press
DOI: 10.1016/j.neuron.2017.03.028

Post-translational selective intracellular silencing of acetylated proteins with de novo selected intrabodies

Autoren: Michele Chirichella, Simonetta Lisi, Marco Fantini, Martina Goracci, Mariantonietta Calvello, Rossella Brandi, Ivan Arisi, Mara D'Onofrio, Cristina Di Primio, Antonino Cattaneo
Veröffentlicht in: Nature Methods, Ausgabe 14/3, 2017, Seite(n) 279-282, ISSN 1548-7091
Herausgeber: Nature Publishing Group
DOI: 10.1038/nmeth.4144

Feasibility of deep learning for automatic parcellation of cortical regions in histological sections.

Autoren: Spitzer H, Stibane D, Caspers S, Zilles K, Amunts K, Dickscheid T
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Resting-state test-retest reliability over different preprocessing steps.

Autoren: Varikuti D, Hoffstaedter F, Genon S, Schwender H, Reid A, Eickhoff S
Veröffentlicht in: 2016
Herausgeber: Proc. 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Multimodal evidence of a rostro-caudal and ventro-dorsal organization within the right dorsal promotor cortex.

Autoren: Genon S, Li H, Fan L, Müller V, Cieslik E, Hoffstaedter F, Reid A, Langner R, Grefkes C, Fox P, Moebus S, Caspers S, Amunts K, Jiang T, Eickhoff S
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Functional hierarchy in the optokinetic nystagmus network reveals functional specific sub-networks.

Autoren: Hoffstaedter F, Reid A, Grefkes C, zu Eulenberg P, Eickhoff S
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Anatomo-functional correlates of visual interhemispheric communication throughout infancy.

Autoren: Adibpour P, Dehaene-Lambertz G, Dubois J
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Sulcus-based alignment of infant brains to study cortical maturation with a AAL-like atlas.

Autoren: Lebenberg J, Labit M, Auzias G, Kabdebon C, Leroy F, Hertz-Pannier L, Poupon C, Dehaene-Lambertz G, Mangin J-F, Dubois J
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Cyto-, receptor and fiber architecture of the rat brain registered to the Waxholm Space.

Autoren: Schubert N, Axer M, Schober M, Huynh A-M, Huysegoms M, Palomero-Gallagher N, Bjaalie J, Leergard T, Amunts K, Zilles K
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Post-mortem mapping of the inner connectivity of the human hippocampus using diffusion MRI at 11.7T.

Autoren: Beaujoin J, Boumezbeur F, Bernard J, Axer M, Mangin J-F, Poupon C
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd annual meeting of the Organization for Human Brain Mapping (OHBM)

Molecular correlates of resting state networks

Autoren: Palomero-Gallagher N, Schleicher A, Amunts K, Zilles K
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Working memory in schizophrenia: a neuroimaging meta-analytic and VBM study.

Autoren: Cieslik E, Müller V, Janssen L, Eickhoff S
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

ALE meta-analysis on altered brain activity in major depression revised: A problem of reproducibility.

Autoren: Müller V, Cieslik E, Serbanescu I, Eickhoff S
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Is age-related decline in cognition action control mediated by functional connectivity changes?

Autoren: Langner R, Latz A, Cieslik E, Hoffstaedter F, Pundt N, Moebus S, Caspers S, Amunts K, Eickhoff SB
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Neural correlates of age-related changes in cognitive action control.

Autoren: Latz A, Hoffstaedter F, Cieslik E, Caspers S, Moebus S, Pundt N, Amunts K, Eickhoff S, Langner R
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Comparing functional connectivity based predictive models across datasets

Autoren: Kamalaker Dadi, Alexandre Abraham, Mehdi Rahim, Bertrand Thirion, Gael Varoquaux
Veröffentlicht in: 2016 International Workshop on Pattern Recognition in Neuroimaging (PRNI), 2016, Seite(n) 1-4, ISBN 978-1-4673-6530-7
Herausgeber: IEEE
DOI: 10.1109/PRNI.2016.7552359

The human dorsal premotor cortex – cytoarchitecture, maps and function.

Autoren: Sigl B, Caspers S, Mohlberg H, Cieslik E, Eickhoff S, Amunts K
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Multimodal connectivity mapping of the left anterior and posterior lateral prefrontal cortex.

Autoren: Reid A, Bzdok D, Langner R, Fox P, Laird A, Amunts K, Eickhoff S, Eickhoff C
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

3D-reconstruction of cell distributions in the human subthalamic nucleus at 1 micron resolution

Autoren: Bludau S, Dickscheid T, Iannilli F, Amunts K
Veröffentlicht in: 2016
Herausgeber: Proceedings of the 22nd annual meeting of the Organization for Human Brain Mapping (OHBM)

Spotlight Imaging to explore high-resolution fiber orientation maps of the rat and human brain.

Autoren: Gräßel D, Palomero-Gallagher N, Axer M, Amunts K, Zeineh M, Zilles K
Veröffentlicht in: 2016, Seite(n) Poster 3604
Herausgeber: Proceedings of the 22nd Annual Meeting of the Organization for Human Brain Mapping (OHBM)

Fast brain decoding with random sampling and random projections

Autoren: Andres Hoyos-Idrobo, Gael Varoquaux, Bertrand Thirion
Veröffentlicht in: 2016 International Workshop on Pattern Recognition in Neuroimaging (PRNI), 2016, Seite(n) 1-4, ISBN 978-1-4673-6530-7
Herausgeber: IEEE
DOI: 10.1109/PRNI.2016.7552350

Astrocyte-neuron interactions in vitro and in vivo: evaluation of computational models.

Autoren: Manninen T., Havela R., Linne M.-L.
Veröffentlicht in: 2016, Seite(n) Abstract number: FENS-3317
Herausgeber: 10th FENS Forum of Neuroscience in Copenhagen

Social-sparsity brain decoders: faster spatial sparsity

Autoren: Gael Varoquaux, Matthieu Kowalski, Bertrand Thirion
Veröffentlicht in: 2016 International Workshop on Pattern Recognition in Neuroimaging (PRNI), 2016, Seite(n) 1-4, ISBN 978-1-4673-6530-7
Herausgeber: IEEE
DOI: 10.1109/PRNI.2016.7552352

Space odyssey - efficient exploration of scientific data

Autoren: Mirjana Pavlovic, Eleni Tzirita Zacharatou, Darius Sidlauskas, Thomas Heinis, Anastasia Ailamaki
Veröffentlicht in: Proceedings of the Third International Workshop on Exploratory Search in Databases and the Web - ExploreDB '16, 2016, Seite(n) 12-18, ISBN 9781-450343121
Herausgeber: ACM Press
DOI: 10.1145/2948674.2948677

Pattern representation and recognition with accelerated analog neuromorphic systems

Autoren: Mihai A. Petrovici, Sebastian Schmitt, Johann Klähn, David Stöckel, Anna Schroeder, Guillaume Bellec, Johannes Bill, Oliver Breitwieser, Ilja Bytschok, Andreas Grübl, Maurice Güttler, Andreas Hartel, Stephan Hartmann, Dan Husmann, Kai Husmann, Sebastian Jeltsch, Vitali Karasenko, Mitja Kleider, Christoph Koke, Alexander Kononov, Christian Mauch, Paul Müller, Johannes Partzsch, ..., Bernhard V
Veröffentlicht in: 2017
Herausgeber: ISCAS 2017

Combination of two-photon fluorescence microscopy and label-free near-infrared reflectance: a new complementary approach for brain imaging

Autoren: Irene Costantini, Anna Letizia Allegra Mascaro, Emilia Margoni, Giulio Iannello, Alessandro Bria, Leonardo Sacconi, Francesco S. Pavone
Veröffentlicht in: Biomedical Optics 2016, 2016, Seite(n) JW3A.23, ISBN 978-1-943580-10-1
Herausgeber: OSA
DOI: 10.1364/CANCER.2016.JW3A.23

Data and Commands Communication Protocol for Neuromorphic Platform Configuration

Autoren: Alessandro Siino, Francesco Barchi, Sergio Davies, Gianvito Urgese, Andrea Acquaviva
Veröffentlicht in: 2016 IEEE 10th International Symposium on Embedded Multicore/Many-core Systems-on-Chip (MCSOC), 2016, Seite(n) 23-30, ISBN 978-1-5090-3531-1
Herausgeber: IEEE
DOI: 10.1109/MCSoC.2016.41

An Accelerated Analog Neuromorphic Hardware System Emulating NMDA- and Calcium-Based Non-Linear Dendrites

Autoren: Johannes Schemmel, Laura Kriener, Paul Müller, Karlheinz Meier
Veröffentlicht in: 2017
Herausgeber: IJCNN 2017

A Collaborative Simulation-Analysis Workflow for Computational Neuroscience Using HPC

Autoren: Johanna Senk, Alper Yegenoglu, Olivier Amblet, Yury Brukau, Andrew Davison, David Roland Lester, Anna Lührs, Pietro Quaglio, Vahid Rostami, Andrew Rowley, Bernd Schuller, Alan Barry Stokes, Sacha Jennifer van Albada, Daniel Zielasko, Markus Diesmann, Benjamin Weyers, Michael Denker, Sonja Grün
Veröffentlicht in: 2017, Seite(n) 243-256
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-53862-4_21

High-Resolution Reconstruction of Whole Mouse Brain Vasculature with Light-Sheet Microscopy

Autoren: Antonino Paolo Di Giovanna, Ludovico Silvestri, Marie Caroline Müllenbroich, Anna Letizia Allegra Mascaro, Leonardo Sacconi, Francesco S. Pavone
Veröffentlicht in: Biomedical Optics 2016, 2016, Seite(n) BTu4D.4, ISBN 978-1-943580-10-1
Herausgeber: OSA
DOI: 10.1364/BRAIN.2016.BTu4D.4

Assembly pointers for variable binding in networks of spiking neurons

Autoren: Robert Legenstein, Christos H. Papadimitriou, Santosh Vempala, Wolfgang Maass
Veröffentlicht in: 2016
Herausgeber: -

Effect of Heterogeneity on Decorrelation Mechanisms in Spiking Neural Networks: A Neuromorphic-Hardware Study

Autoren: Pfeil T, Jordan J, Tetzlaff T, Grübl A, Schemmel J, Diesmann M, Meier K
Veröffentlicht in: 2016
Herausgeber: G-Node
DOI: 10.12751/nncn.bc2016.0166

Label-free NIR reflectance imaging as a complimentary tool for two-photon fluorescence microscopy: multimodal investigation of stroke (Conference Presentation)

Autoren: Anna Letizia Allegra Mascaro, Irene Costantini, Emilia Margoni, Giulio Iannello, Alessandro Bria, Leonardo Sacconi, Francesco S. Pavone
Veröffentlicht in: Multiphoton Microscopy in the Biomedical Sciences XVI, 2016, Seite(n) 97121K
Herausgeber: SPIE
DOI: 10.1117/12.2208886

Morphing Image Masks for Stacked Histological Sections Using Laplace’s Equation

Autoren: Martin Schober, Markus Axer, Marcel Huysegoms, Nicole Schubert, Katrin Amunts, Timo Dickscheid
Veröffentlicht in: 2017, Seite(n) 146-151
Herausgeber: Springer Berlin Heidelberg
DOI: 10.1007/978-3-662-49465-3_27

TRANSFORMERS: Robust spatial joins on non-uniform data distributions

Autoren: Mirjana Pavlovic, Thomas Heinis, Farhan Tauheed, Panagiotis Karras, Anastasia Ailamaki
Veröffentlicht in: 2016 IEEE 32nd International Conference on Data Engineering (ICDE), 2016, Seite(n) 673-684, ISBN 978-1-5090-2020-1
Herausgeber: IEEE
DOI: 10.1109/ICDE.2016.7498280

Towards automated neuron tracing via global and local 3D image analysis

Autoren: Ludovica Acciai, Irene Costantini, Francesco Saverio Pavone, Valerio Conti, Renzo Guerrini, Paolo Soda, Giulio Iannello
Veröffentlicht in: 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI), 2016, Seite(n) 322-325, ISBN 978-1-4799-2349-6
Herausgeber: IEEE
DOI: 10.1109/ISBI.2016.7493274

Mapping whole-brain activity with cellular resolution by light-sheet microscopy and high-throughput image analysis (Conference Presentation)

Autoren: Ludovico Silvestri, Nikita Rudinskiy, Marco Paciscopi, Marie Caroline Müllenbroich, Irene Costantini, Leonardo Sacconi, Paolo Frasconi, Bradley T. Hyman, Francesco S. Pavone
Veröffentlicht in: Clinical and Translational Neurophotonics; Neural Imaging and Sensing; and Optogenetics and Optical Manipulation, 2016, Seite(n) 969012
Herausgeber: SPIE
DOI: 10.1117/12.2208603

True random number generation from bang-bang ADPLL jitter

Autoren: Felix Neumarker, Sebastian Hoppner, Andreas Dixius, Christian Mayr
Veröffentlicht in: 2016 IEEE Nordic Circuits and Systems Conference (NORCAS), 2016, Seite(n) 1-5, ISBN 978-1-5090-1095-0
Herausgeber: IEEE
DOI: 10.1109/NORCHIP.2016.7792875

Neuromorphic Hardware In The Loop: Training a Deep Spiking Network on the BrainScaleS Wafer-Scale System

Autoren: Sebastian Schmitt, Johann Klaehn, Guillaume Bellec, Andreas Gruebl, Maurice Guettler, Andreas Hartel, Stephan Hartmann, Dan Husmann, Kai Husmann, Vitali Karasenko, Mitja Kleider, Christoph Koke, Christian Mauch, Eric Mueller, Paul Mueller, Johannes Partzsch, Mihai A. Petrovici, Stefan Schiefer, Stefan Scholze, Bernhard Vogginger, Robert Legenstein, Wolfgang Maass, Christian Mayr, Johannes Schemmel
Veröffentlicht in: 2017
Herausgeber: IJCNN

Spline-Based Multimodal Image Registration of 3D PLI Data of the Human Brain

Autoren: Sharib Ali, Karl Rohr, David Gräßel, Philipp Schlömer, Katrin Amunts, Roland Eils, Markus Axer, Stefan Wörz
Veröffentlicht in: 2017, Seite(n) 268-273
Herausgeber: Springer Berlin Heidelberg
DOI: 10.1007/978-3-662-54345-0_61

A highly tunable 65-nm CMOS LIF neuron for a large scale neuromorphic system

Autoren: Syed Ahmed Aamir, Paul Muller, Andreas Hartel, Johannes Schemmel, Karlheinz Meier
Veröffentlicht in: ESSCIRC Conference 2016: 42nd European Solid-State Circuits Conference, 2016, Seite(n) 71-74, ISBN 978-1-5090-2972-3
Herausgeber: IEEE
DOI: 10.1109/ESSCIRC.2016.7598245

Adaptive gaze stabilization through cerebellar internal models in a humanoid robot

Autoren: Lorenzo Vannucci, Silvia Tolu, Egidio Falotico, Paolo Dario, Henrik Hautop Lund, Cecilia Laschi
Veröffentlicht in: 2016 6th IEEE International Conference on Biomedical Robotics and Biomechatronics (BioRob), 2016, Seite(n) 25-30, ISBN 978-1-5090-3287-7
Herausgeber: IEEE
DOI: 10.1109/BIOROB.2016.7523593

Towards a framework for end-to-end control of a simulated vehicle with spiking neural networks

Autoren: Jacques Kaiser, J. Camilo Vasquez Tieck, Christian Hubschneider, Peter Wolf, Michael Weber, Michael Hoff, Alexander Friedrich, Konrad Wojtasik, Arne Roennau, Ralf Kohlhaas, Rudiger Dillmann, J. Marius Zollner
Veröffentlicht in: 2016 IEEE International Conference on Simulation, Modeling, and Programming for Autonomous Robots (SIMPAR), 2016, Seite(n) 127-134, ISBN 978-1-5090-4616-4
Herausgeber: IEEE
DOI: 10.1109/SIMPAR.2016.7862386

Robustness from structure: Inference with hierarchical spiking networks on analog neuromorphic hardware

Autoren: Mihai A. Petrovici, Anna Schroeder, Oliver Breitwieser, Andreas Grübl, Johannes Schemmel, Karlheinz Meier
Veröffentlicht in: 2017
Herausgeber: IJCNN 2017

Sequential decision making based on emergent emotion for a humanoid robot

Autoren: Murat Kirtay, Lorenzo Vannucci, Egidio Falotico, Erhan Oztop, Cecilia Laschi
Veröffentlicht in: 2016 IEEE-RAS 16th International Conference on Humanoid Robots (Humanoids), 2016, Seite(n) 1101-1106, ISBN 978-1-5090-4718-5
Herausgeber: IEEE
DOI: 10.1109/HUMANOIDS.2016.7803408

Rehabilitation-triggered cortical plasticity after stroke: in vivo imaging at multiple scales (Conference Presentation)

Autoren: Anna Letizia Allegra Mascaro, Emilia Conti, Stefano Lai, Cristina Spalletti, Antonino Paolo Di Giovanna, Claudia Alia, Alessandro Panarese, Leonardo Sacconi, Silvestro Micera, Matteo Caleo, Francesco S. Pavone
Veröffentlicht in: Neural Imaging and Sensing, 2017, Seite(n) 100510L
Herausgeber: SPIE
DOI: 10.1117/12.2250860

Rewriting Minimisations for Efficient Ontology-Based Query Answering

Autoren: Tassos Venetis, Giorgos Stoilos, Vasilis Vassalos
Veröffentlicht in: 2016 IEEE 28th International Conference on Tools with Artificial Intelligence (ICTAI), 2016, Seite(n) 1095-1102, ISBN 978-1-5090-4459-7
Herausgeber: IEEE
DOI: 10.1109/ICTAI.2016.0168

Multi Scale Morpho-functional Characterization of Damage and Rehabilitation After Stroke

Autoren: Francesco S. Pavone
Veröffentlicht in: Frontiers in Optics 2016, 2016, Seite(n) FTh4D.1, ISBN 978-1-943580-19-4
Herausgeber: OSA
DOI: 10.1364/FIO.2016.FTh4D.1

Modeling and simulation of multi-scale spiking neuronal networks

Autoren: Schmidt M
Veröffentlicht in: 2016
Herausgeber: RWTH Aachen University Aachen

Dimensionality reduction for mathematical models in neuroscience.

Autoren: Lehtimäki M
Veröffentlicht in: 2016
Herausgeber: Tampere University of Technology

Pick J, Erhebung und Analyse von Nutzeranforderungen an einen Editor für Metadaten in den Neurowissenschaften

Autoren: Pick, Jana
Veröffentlicht in: 2016
Herausgeber: RWTH Aachen

Connectivity structure induced dynamics and correlations in spiking neural networks

Autoren: Bos, H.
Veröffentlicht in: 2017
Herausgeber: RWTH Aachen University

Nonlinear synaptic integration on dendrites of striatal medium spiny neuron – a computational study

Autoren: Du, K.
Veröffentlicht in: 2017
Herausgeber: Karolinska Institutet

CaMKII activation supports reward-based neural network optimization through Hamiltonian sampling

Autoren: Yu Z, Kappel D, Legenstein R, Song S, Chen F, and Maass W
Veröffentlicht in: 2016
Herausgeber: arXiv.org

EU citizens want to be informed of the use of their personal data

Autoren: Bitsch L
Veröffentlicht in: 2016
Herausgeber: Danish Board of Technology Foundation

Learning Active Learning from Real and Synthetic Data

Autoren: Konyushkova K, Sznitman R, Fua P
Veröffentlicht in: arXiv, 2017
Herausgeber: arXiv

Ethics Management and Responsible Research and Innovation in the Human Brain Project

Autoren: Rainey, Stephen ; Stahl, Bernd Carsten ; Shaw, Mark Christopher ; Reinsborough, Michael
Veröffentlicht in: Handbook - Responsible Innovation: A Global Resource, 2017
Herausgeber: Edward Elgar Publishing Ltd

Including Gap Junctions into Distributed Neuronal Network Simulations

Autoren: Jan Hahne, Moritz Helias, Susanne Kunkel, Jun Igarashi, Itaru Kitayama, Brian Wylie, Matthias Bolten, Andreas Frommer, Markus Diesmann
Veröffentlicht in: 2016, Seite(n) 43-57
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-50862-7_4

High-Resolution Fiber and Fiber Tract Imaging Using Polarized Light Microscopy in the Human, Monkey, Rat, and Mouse Brain

Autoren: Karl Zilles, Nicola Palomero-Gallagher, David Gräßel, Philipp Schlömer, Markus Cremer, Roger Woods, Katrin Amunts, Markus Axer
Veröffentlicht in: 2016, Seite(n) 369-389
Herausgeber: Elsevier
DOI: 10.1016/B978-0-12-801393-9.00018-9

Retina color-opponency based pursuit implemented through spiking neural networks in the Neurorobotics Platform

Autoren: Alessandro Ambrosano, Lorenzo Vannucci, Ugo Albanese, Murat Kirtay, Egidio Falotico, Pablo Martínez-Cañada, Georg Hinkel, Jacques Kaiser, Stefan Ulbrich, Paul Levi, Christian Morillas, Alois Knoll, Marc-Oliver Gewaltig, Cecilia Laschi
Veröffentlicht in: 2016, Seite(n) 16-27
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-42417-0_2

Finite-Difference Time-Domain Simulation for Three-Dimensional Polarized Light Imaging

Autoren: Miriam Menzel, Markus Axer, Hans De Raedt, Kristel Michielsen
Veröffentlicht in: 2016, Seite(n) 73-85
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-50862-7_6

Noisy Softplus: A Biology Inspired Activation Function

Autoren: Qian Liu, Steve Furber
Veröffentlicht in: 2016, Seite(n) 405-412
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-46681-1_49

Towards Large-Scale Fiber Orientation Models of the Brain – Automation and Parallelization of a Seeded Region Growing Segmentation of High-Resolution Brain Section Images

Autoren: Anna Lührs, Oliver Bücker, Markus Axer
Veröffentlicht in: 2016, Seite(n) 28-42
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-50862-7_3

Brain Imaging and Privacy Concerns

Autoren: Salles A
Veröffentlicht in: Farisco M Evers K Neurotechnology and Direct Brain Communication, 2016
Herausgeber: Routledge

NESTML: a modeling language for spiking neurons

Autoren: Plotnikov D, Blundell I, Ippen T, Eppler JM, Rumpe B, Morrison A.
Veröffentlicht in: Lecture Notes in Neuroinformatics, 2017
Herausgeber: Gesellschaft für Informatik

Eye-head stabilization mechanism for a humanoid robot tested on human inertial data

Autoren: Lorenzo Vannucci, Egidio Falotico, Silvia Tolu, Paolo Dario, Henrik Hautop Lund, Cecilia Laschi
Veröffentlicht in: 2016, Seite(n) 341-352
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-42417-0_31

Comparative Analysis of Receptor Types That Identify Primary Cortical Sensory Areas

Autoren: K. Zilles, N. Palomero-Gallagher
Veröffentlicht in: 2017, Seite(n) 225-245
Herausgeber: Elsevier
DOI: 10.1016/B978-0-12-804042-3.00043-9

Visual Target Sequence Prediction via Hierarchical Temporal Memory Implemented on the iCub Robot

Autoren: Murat Kirtay, Egidio Falotico, Alessandro Ambrosano, Ugo Albanese, Lorenzo Vannucci, Cecilia Laschi
Veröffentlicht in: 2016, Seite(n) 119-130
Herausgeber: Springer International Publishing
DOI: 10.1007/978-3-319-42417-0_12

Immunogold Protein Localization on Grid-Glued Freeze-Fracture Replicas

Autoren: Harumi Harada, Ryuichi Shigemoto
Veröffentlicht in: 2016, Seite(n) 203-216
Herausgeber: Springer New York
DOI: 10.1007/978-1-4939-6352-2_12

Rechte des geistigen Eigentums

Method for generating true random numbers on a multiprocessor system and the same

Antrags-/Publikationsnummer: US 15/272,550, 2016
Datum: 2016-09-22
Antragsteller:

A METHOD OF MODULATING EPILEPTOGENICITY IN A PATIENT'S BRAIN

Antrags-/Publikationsnummer: EP 16763307
Datum: 2016-07-18
Antragsteller:

METHOD FOR GENERATING TRUE RANDOM NUMBERS ON A MULTIPROCESSOR SYSTEM AND THE SAME

Antrags-/Publikationsnummer: EP 16190261
Datum: 2016-09-23
Antragsteller:

Multiprozessorsystem mit dynamischer Spannungs- und Frequenzskalierung

Antrags-/Publikationsnummer: DE 10 2017 128 711.6
Datum: 2017-05-24
Antragsteller:

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