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SCRUTINIZING VIRUS-CELL INTERACTIONS: FROM ENSEMBLE TO SINGLE-MOLECULE STUDIES

Objective

Viruses are nano-sized, genome-filled protein containers with metastable mechanical properties. They form by spontaneous self-assembly inside the crowded, heterogeneous environment of the infected cells. While structural characterization of viruses is becoming increasingly more refined, essential questions about the viral life cycle remain unanswered up to date. This includes: (i) how do the capsomeres (capsid proteins) rearrange during the infection cycle of a viral capsid? (ii) What are the interaction forces responsible for successful infection of viral capsids? (iii) Which kinetic parameters govern this process? To address these questions, the present proposal aims to understand the physico-biology behind the binding of viral capsids to their host cell membrane using human adeno virus as a model system. To accomplish these goals I will investigate the structural and mechanical properties of those proteins forming the viral capsids and measure the binding force to the targeted cell membrane. High-speed atomic force microscopy (HS-AFM) will allow me to directly observe the ensemble of proteins in action at high spatio-temporal resolution and under near-to physiological conditions. At the same time Single Molecule Force Spectroscopy (SMFS) will allow to measure directly the magnitude of forces involved in the interactions. Having access to the information on structure as well as to the unbinding dynamics of the capsid proteins, I will be able to build a kinetic model of the first steps of viral infection at the single-molecule level.

Fields of science (EuroSciVoc)

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Programme(s)

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Topic(s)

Calls for proposals are divided into topics. A topic defines a specific subject or area for which applicants can submit proposals. The description of a topic comprises its specific scope and the expected impact of the funded project.

Funding Scheme

Funding scheme (or “Type of Action”) inside a programme with common features. It specifies: the scope of what is funded; the reimbursement rate; specific evaluation criteria to qualify for funding; and the use of simplified forms of costs like lump sums.

MSCA-IF-EF-ST - Standard EF

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Call for proposal

Procedure for inviting applicants to submit project proposals, with the aim of receiving EU funding.

(opens in new window) H2020-MSCA-IF-2016

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Coordinator

RIJKSUNIVERSITEIT GRONINGEN
Net EU contribution

Net EU financial contribution. The sum of money that the participant receives, deducted by the EU contribution to its linked third party. It considers the distribution of the EU financial contribution between direct beneficiaries of the project and other types of participants, like third-party participants.

€ 177 598,80
Address
Broerstraat 5
9712CP Groningen
Netherlands

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Activity type
Higher or Secondary Education Establishments
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Total cost

The total costs incurred by this organisation to participate in the project, including direct and indirect costs. This amount is a subset of the overall project budget.

€ 177 598,80
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