Human Brain Project Specific Grant Agreement 2

Livrables

D4.4.1 All Models of Key Cognitive Processes developed during SGA2

Presentation of all models developed by WP4.4 during the SGA2, including: functions and performance, validation (by SP4, by rest of the HBP and/or by third parties), how results compare to targeted impact, and links to models and related datasets in publicly accessible online repositories.

D2.4.1 Software tool for brain structure - phenotype associations

Software tool for brain structure - phenotype associations implemented (T2.4.2); software available for usage

D9.1.1 Working prototype of a Collaboratory app for graphical model building

Collaboratory app usable by an SP9 member outside the developer team

D5.6.1 Interactive classifier training via the new Viewer

Users can train machine learning algorithms interactively by giving annotations in the web-based Viewer (T5.6.1)

D2.6.1 Tool for Morphological classification of neurons

Tool for Morphological classification of neurons (T2.6.4) made available; storage of software on HBP Collab

D5.3.1 New release of interactive spatial alignment tool

We will deploy the 2nd release of the interactive spatial alignment tool started in SGA1. The release will provide a significantly streamlined user interface, especially a much better user experience in terms of landmark management and interactive navigation. (T5.3.3)

D7.3.1 Multi-compartment benchmark and validation suites on HPC systems

The validation and benchmark suites for multi- compartment simulators are deployed and their associated documentation can be downloaded from public repositories; the continuous integration framework is publishing up to date validation and benchmark results from HPC systems used in the HBP.

D9.5.1 Temporal filtering network

Network for temporal filtering running on SpiNNaker (Task 9.5.1)

D2.3.1 Alignment strategy of datasets from TPFM, 3D-PLI, and dMRI

Alignment strategy of datasets from TPFM, 3D-PLI, and dMRI implemented (T2.3.4); Datasets made available in the HBP human brain atlas

D9.3.1 PyNN 0.9 on SpiNNaker

As complete a PyNN 0.9 implementation on SpiNNaker as possible (Task 9.3.3)

D5.7.1 Representations of optical imaging data in the Neo data object model

This is a release of the Neo library that contains support for the representations of optical imaging data. This feature will facilitate the analysis of activity data obtained from optical imaging experiments using tools built on the Neo data model. Successful representation of a dataset in the Neo object model, and the subsequent application of an analysis function of the Elephant framework on that data object, will be shown (T5.7.1-2)

D4.3.1 All Models of Plasticity, Learning and Memory developed during SGA2

Presentation of all models developed by WP4.3 during the SGA2, including: functions and performance, validation (by SP4, by rest of the HBP and/or by third parties), how results compare to targeted impact, and links to models and related datasets in publicly accessible online repositories.

D4.5.1 All Whole-Brain Models developed during SGA2 and Comparison with Experiments

Presentation of all models developed by WP4.5 during the SGA2, including: functions and performance, validation (by SP4, by rest of the HBP and/or by third parties), how results compare to targeted impact, and links to models and related datasets in publicly accessible online repositories.

D2.1.1 Comparison of Deep-learning based cytoarchitectonic mapping of cortex in the big brain against gold standard cytoarchitectonic map

Deep-learning based cytoarchitectonic mapping of cortex in the big brain and comparison against gold standard cytoarchitectonic map (T2.1.4); map made available in the HBP human brain atlas

D8.5.3 Μedical Informatics Platform Releases - SOFTWARE & REPORT

Μedical Informatics Platform Releases - SOFTWARE & REPORT

D5.4.1 First release of software adapted to new Viewer Architecture

Coordinated release of several services related to atlas viewers, adapted to a more unified viewer infrastructure. The architecture of this unified viewer ecosystem will be specified by SP5 towards the end of SGA1 and become the basis for this work. (T5.4.3)

D4.2.1 All Models of Brain Circuits developed during SGA2

Presentation of all models developed by WP4.2 during the SGA2, including: functions and performance, validation (by SP4, by rest of the HBP and/or by third parties), how results compare to targeted impact, and links to models and related datasets in publicly accessible online repositories.

D4.1.1 All Models for Bridging Scales developed during

Presentation of all models developed by WP4.1 during the SGA2, including: functions and performance, validation (by SP4, by rest of the HBP and/or by third parties), how results compare to targeted impact, and links to models and related datasets in publicly accessible online repositories.

D6.1.1 SP6 Annual Compound Deliverable Year 1

Overview of key results and impact achieved in M1-M12, tailored for presentation to the relevant audiences (research/industry/public). References to HBP/SP/CDP objectives and use cases for navigation between multiple Subprojects. Linkage of results to components/a set of component factsheets (lower-level information: component ownership, technology readiness level, performed quality control checks, etc.).

D12.4.1 Data Policy Manual

Having a set of data-related policies is a requirement for the HBP in order to: -Ensure that expectations with regards to data handling are clear -Comply with all data-related regulations and legislation, in particular those related to data protection -Ensure that all data registered and used in the HBP comply with ethical and other requirements -Demonstrate good management and leadership and implement good practice in data management Milestone verified by upload of the Data Policy Manual.

D1.6.2 SP1 Mouse Brain Organisation and Interspecies Comparisons - Second Data Results package (update on implementation of the DMP - M24)

WPs involved: WP1.1, WP1.2, WP1.3, WP1.4, WP1.5, and WP1.6 Contents: final report on the SP1 planned deliveries. This report will include the datasets generated in the SGA2 on whole brain and four major brain circuits (neocortex, cerebellum, basal ganglia, and hippocampus) data. This report will also include the final results on the integration of molecular, cellular and functional data (neocortex, cerebellum, basal ganglia, and hippocampus) and its application for modelling.

D1.3.2 CDP1 Annual Compound Deliverable Year 2

CDP1 Annual Compound Deliverable Year 2 Overview of Key Results and Impact achieved in M13 to M24, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.)

D5.1.1 Completion of SGA1 data/model curation into NIP meta data database

Table showing link between data/model components in PLA and curated data/models in NIP (T5.1.1-2)

D8.6.1 CDP6 Results SGA2 Year 1 Implementation for accurate HPC-based screening protocols of neuro-drug candidates

CDP6 Results SGA2 Year 1 Implementation for accurate HPC-based screening protocols of neuro-drug candidates. CDP6 Annual compound deliverable Year 1 Overview of Key Results and Impact achieved in M1 to M12, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.) This deliverable will also refer to results for SGA2_HPC-based chemical optimisation codes and increasing ligand specificity toward receptors' subclasses

D12.5.2 SGA2 - SP12 M24 reporting (Component id: 2328)

Progress report SP12 M24 SGA2

D9.6.2 SP9 Neuromorphic Computing Platform - Results from SGA2 year 2

The summary of SP 9 results for project months M13-24, broken down by task. WPs involved: WP9.1, WP9.2, WP9.3, WP9.4, WP9.5 and WP9.6 In order to report fully, the Deliverable may need to include information that the SP does not wish to make public at the time of the report. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published publicly.

D6.4.1 CDP2 Annual Compound Deliverable Year 2

Overview of key results and impact achieved in M13-M24, tailored for presentation to the relevant audiences (research/industry/public). References to HBP/SP/CDP objectives and use cases for navigation between multiple Subprojects. Linkage of results to components/a set of component factsheets (lower-level information: component ownership, technology readiness level, performed quality control checks, etc.).

D2.7.3 CDP3 Results for SGA2 Year 1

CDP3 SGA2 Results Overview Deliverable: Overview of Key Results achieved in M1 to M12, tailored for presentation to the relevant audiences (research/industry/public)

D3.1.1 Simultaneous 2-photon calcium imaging in dendritic tufts receiving feedback inputs, and cell bodies of the same neurons receiving feedforward inputs

Data collected and paper published. Cross-species comparisons in visual cortex incorporated. (T.3.1.2)

D10.5.2 SP10 Neurorobotics Platform - Results for SGA2 Year 2

WPs involved: WP10.1, WP10.2, WP10.3, WP10.4 & WP10.5 Summary of SP Results for M12-24, broken down by Task: o Actual vs. planned results (due & done/due & not done) o Results passed to another Task, WP or SP (due & done/due & not done) o Milestones due and achieved, how validated, by whom. o Milestones due but not achieved, why, impact, corrective action o Publications

D7.2.1 Key technologies for fast data access and retrieval

This report summarises key technologies to support fast data access and retrieval for interactive analysis and visualisation, which have been identified and tested. This deliverable does not yet comprise the final implementation of these technologies.

D12.3.2 2nd Report SP12-SGA2: Lessons from stakeholder engagement and dialogue

The report collects up on the lessons learned from stakeholder dialogue and engagement in the Human Brain Project, from the ramp-up to the end of the SGA2 phase, and it develops foundation for stakeholder engagement in the final phases of the Human Brain Project.

D11.5.1 Fourth HBP Curriculum teaching cycle released (T11.5.2)

Third HBP Curriculum teaching cycle through online questionnaire evaluated and online courses adapted. Fourth teaching cycle started and Call for Expression of Interest for HBP Curriculum Workshops announced. Evaluation results are made available for consortium members and the public upon request. Call for Expression of Interest announced to the scientific community.

D8.5.1 Software requirements specifications (SRS) - REPORT

Software requirements specifications (SRS) - REPORT

D6.3.1 SP6 Annual Compound Deliverable Year 2

D5.8.2 SP5 Neuroinformatics Platform - Results for SGA2 Year 2

Summary of SP Results for M13-24, broken down by Task: o Actual vs. planned results (due & done/due & not done) o Results passed to another Task, WP or SP (due & done/due & not done) o CDP Products (due & done/due & not done) o Milestones due and achieved, how validated, by whom. o Milestones due but not achieved, why, impact, corrective action o Publications NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website.

D12.3.1 Report on SP12-SGA2 Citizen engagement

Report on citizen engagement activities across Europe, including recommendations from citizens to the Human Brain Project.

D8.4.1 Reports on disease signatures via sub-type identification, on development and application of methods, and tools

Report on identification of disease signatures and application development is delivered.

D5.2.1 Release of updated atlas curation supporting material

Users can access tutorials and SOPs from HBP workbench or request support from UiO atlas curation team (T5.2.2)

D5.8.1 SP5 Neuroinformatics Platform - Results for SGA2 Year 1

SP5 Neuroinformatics Platform - Results for SGA2 Year 1 Summary of SP Results for M1-12, broken down by Task: o Actual vs. planned results (due & done/due & not done) o Results passed to another Task, WP or SP (due & done/due & not done) o CDP Products (due & done/due & not done) o Milestones due and achieved, how validated, by whom. o Milestones due but not achieved, why, impact, corrective action o Publications o SP Roadmap for SGA2, validated by other SPs receiving inputs from your SP NOTE: In order to report fully on the above topics, the Deliverable may need to include information that we would not wish to make public. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published on the HBP public website.

D8.3.1 Signed partnership with one European reference network

Signed partnership with one European reference network

D3.6.1 Systems and Cognitive Neuroscience - Results for SGA2 Year 1

WPs involved: WP3.1, WP3.2., WP3.3, WP3.4, WP3.5, WP3.6 Summary of SP3 Results for M1-12, broken down by Task: o Actual vs. planned results (due & done/due & not done) o Results passed to another Task, WP or SP (due & done/due & not done) o CDP products (due & done/due & not done) o Milestones due and achieved, how validated, by whom. o Milestones due but not achieved, why, impact, corrective action o Publications

D2.7.4 CDP3 Results for SGA2 Year 2

CDP3 SGA2 Results Overview Deliverable Overview of Key Results achieved in M13 to M24, tailored for presentation to the relevant audiences (research/industry/public)

D9.4.1 CDP5-Biological deep learning: Results for SGA2 Year 1

CDP5-Biological deep learning: Results for SGA2 Year 1 CDP5 Annual compound deliverable Year 1 Overview of Key Results and Impact achieved in M1 to M12, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.) This deliverable will be a public report including theoretical research on learning principles, their transfer to the HBP computing infrastructures in SP7 and SP9, results of initial experiments and plans for M13 to M24 in SGA2

D4.6.1 SP4 EITN activity report

Report on EITN activity, its success, points that can be improved and what is foreseen

D8.2.1 MIP installed in Thirty Hospitals

MIP installed in Thirty Hospitals Demonstration of MIP software installation in 30 hospitals. Demonstration will be in form of a summary report of results: data profiling in each site, issues and lessons learned, user tests and feedback received during the hand-over and training.

D5.10.1 CDP8 Results SGA2

CDP8 SGA2 Results Overview Deliverable: Overview of Key Results achieved in M1 to M24, tailored for presentation to the relevant audiences. WPs involved: WP5.10. Key results involved: KRc8.1, KRc8.2, KRc8.3. Use cases involved: SGA2-SP4-UC001, SGA2-SP5-UC001, SGA2-SP5-UC002, SGA2-SP6-UC001, SGA2-SP6-UC003, SGA2-SP7-UC001, SGA2-SP11-UC003. The report summarizes the results obtained during the project phase, which will involve: code for large-scale brain simulation on HBP’s Joint Platform; code for connectome extraction and integration of results into NIP ontology; interactive tutorials; preprocessed connectomes from major repositories; online version of von Economo and Koskinas atlas; linked connectivity to architectonic data; human connectivity predictions.

D1.6.3 SP1 Mouse Brain Organisation and Interspecies Comparisons - Comparative study of cells and microcircuits in the rodent and human brain

WPs involved: WP1.1, WP1.2, WP1.3, WP1.4, WP1.5, and WP1.6 Contents: report on the final comparative study of cells and microcircuits in the rodent and human brain.

D7.6.1 SP7 High-Performance Analytics and Computing Platform - Results for SGA2 Year 1

High Performance Analytics and Computing Platform v2.5. The Platform, accessible to end users through the HBP Collaboratory, will provide the HBP and the neuroscience community with access to federated data and scalable compute resources as well as visualisation and simulation technology.

D9.4.2 CDP5-Biological deep learning: Results for SGA2 Year 2

CDP5 Annual compound deliverable Year 2 Overview of Key Results and Impact achieved in M13 to M24, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.) This deliverable will be a public report including theoretical research on learning principles, their transfer to the HBP computing infrastructures in SP7 and SP9, final experimental results and applications, an evaluation of the developments outside the HBP and a planning outlook to SGA3.

D12.2.1 Report on conceptual issues in human identity

Report on conceptual issues in human identity.

D2.7.2 SP2 Human Brain Organisation - Results for SGA2 Year 2

WPs involved: WP2.1, WP2.2., WP2.3, WP2.4, WP2.5, WP2.6 & WP2.7 Summary of SP Results for M13-24

D8.10.1 Provide operational MIP infrastructures to UKAACHEN and CHARITE

Provide operational MIP infrastructures to UKAACHEN (P73) and CHARITE (P122), to develop and implement a pathophysiological model for neurobehavioural symptom clustering. Test run and report of data analysis.

D7.6.2 SP7 High-Performance Analytics and Computing Platform - Results for SGA2 Year 2

High Performance Analytics and Computing Platform v3. The Platform, accessible to end users through the HBP Collaboratory, will provide the HBP and the neuroscience community with access to federated data and scalable compute resources. It will also provide visualisation and exascale-ready simulation technology.

D8.1.2 SP8 MIP - Results for SGA2 Year 2

SP8 MIP - Results for SGA2 period 2 SP8 Summary of Results for M12-24: actual vs. planned results o Risks and Issues log updated o Key Results, Impact status & Exceptional Achievements (from users' perspective) o Dependent results flow (i.e. if/how dependent components were incorporated into the next) o Milestones due and achieved, how validated, by whom o Milestones due but not achieved, why, impact, corrective action o Lessons Learned (and if any incorporated already) o Product Roadmap updated o Platform User feedback on the period o Publications

D6.2.1 CDP2 Annual Compound Deliverable Year 1

D1.6.1 SP1 Mouse Brain Organisation and Interspecies Comparisons: First Data Results package (update on implementation of the DMP - M12)

WPs involved: WP1.1, WP1.2, WP1.3, WP1.4, WP1.5, and WP1.6 Contents: First report including the preliminary list of deliveries for the period M01-M12 including datasets, tools, and models. The results expected to be included are as follows: preliminary datasets generated in the SGA2 on whole brain and four major brain circuits (neocortex, cerebellum, basal ganglia, hippocampus); First draft on the integration of molecular, cellular and functional data (neocortex, cerebellum, basal ganglia, hippocampus) and its application for modelling; Preliminary datasets for the comparative study of cells and microcircuits in the rodent and human brain.

D8.1.1 SP8 MIP - Results for SGA2 Year 1

SP8 MIP - Results for SGA2 period 1 SP8 Summary of Results for M1-12: actual vs. planned results o Risks and Issues log updated o Key Results, Impact status & Exceptional Achievements (from users' perspective) o Dependent results flow (i.e. if/how dependent components were incorporated into the next) o Milestones due and achieved, how validated, by whom o Milestones due but not achieved, why, impact, corrective action o Lessons Learned (and if any incorporated already) o Product Roadmap updated o Platform User feedback on the period o Publications

D11.1.1 Governance handbook

DIR handbook with procedures to follow regarding internal management, interactions with PCO, with SP Leaders and with Advisory Boards. (T11.1.2)

D12.1.1 SP12-SGA2 Foresight Lab & Researchers Awareness background report 2

Original research: Briefing report on Communities and Infrastructure Building. Milestone verified by upload of the report.

D11.2.10 Gender Action Plan

The Gender Action Plan is a required reference document to align structure and processes, objectives and key activities for improved gender equality in HBP with DIR, SIB, GAC, Ethic Board, Education Programme and Subprojects.

D12.5.3 SGA2-SP12 Communication reporting (Component id: 2329)

Communication report SP12 M24 SGA2

D11.1.3 SP11 Management and Coordination – Public Key Results Year 2

Summary of SP11 public Key Results for SGA2 Year 2 (M13-M24)

D10.5.1 SP10 Neurorobotics Platform - Results for SGA2 Year 1

WPs involved: WP10.1, WP10.2, WP10.3, WP10.4 & WP10.5 Summary of SP Results for M1-12, broken down by Task: o Actual vs. planned results (due & done/due & not done) o Results passed to another Task, WP or SP (due & done/due & not done) o Milestones due and achieved, how validated, by whom. o Milestones due but not achieved, why, impact, corrective action o Publications o SP Roadmap for SGA3

D12.5.4 SP12 Opinion 3 (Component id: 1967)

SP12's third Opinion on ethical, philosophical and societal issues related to consciousness. (ID: 1967)

D2.2.1 CDP4 Visuo-Motor Integration - Results for SGA2 Year 1

CDP4 Annual compound deliverable Year 1 Overview of Key Results and Impact achieved in M1 to M12, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.)

D11.3.4 Short Summary of Infrastructure Voucher Programme

Infrastructure Vouchers calls closed; vouchers assigned to the selected users; budget distribution made; short evaluation summary report (T11.3.4, T11.6.1)

D3.3.1 Acquisition of first datasets of electrophysiological recordings of hippocampal cells in VR environment

Release of software code and simulated data (preliminary version) (T3.2.5)

D12.5.1 SGA2-SP12 M12 reporting

Progress report of SP12 for M12 SGA2.

D9.6.1 SP9 Neuromorphic Computing Platform - Results from SGA2 year 1

The summary of SP 9 results for project months M1-12, broken down by task. WPs involved: WP9.1, WP9.2, WP9.3, WP9.4, WP9.5 and WP9.6 In order to report fully, the Deliverable may need to include information that the SP does not wish to make public at the time of the report. This material will be included in the Deliverable for the EC and Reviewers, but not in the version published publicly.

D7.1.1 HPAC Platform Architecture Specification v1

This report will contain a first specification within SGA2 of the HPAC Platform including the Fenix infrastructure.

D6.5.1 SP6 Summary Report on Community Outreach

Summary report of SP6 SGA2 community outreach.

D4.7.1 SP4 Theoretical Neuroscience models - 1st part

Involves all models of work done from all members of the SP4 during the 1st year of SGA2. As there are some models not yet published, there will be a confidential annex for this confidential data that will be only accessible to reviewers, EC and PCO.

D3.6.2 SP3 Systems and Cognitive Neuroscience - Results for SGA2 Year 2

WPs involved: WP3.1, WP3.2., WP3.3, WP3.4, WP3.5, WP3.6 Summary of SP3 Results for M13-24, broken down by Task: o Actual vs. planned results (due & done/due & not done) o Results passed to another Task, WP or SP (due & done/due & not done) o CDP products (due & done/due & not done) o Milestones due and achieved, how validated, by whom. o Milestones due but not achieved, why, impact, corrective action o Publications

D 1.3.1 CDP1 Annual Compound Deliverable Year 1

CDP1 Annual Compound Deliverable Year 1 Overview of Key Results and Impact achieved in M1 to M12, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.)

D5.9.1 Strategy and organization of a High-Level Support Team (HLST)

Plan for decision making on the use of resources to achieve the overall goals of the joint platform and organization and coordination of the operations of the HLST.

D4.4.2 CDP7 Results SGA2

This deliverable describes the results of CDP7during SGA2, focusing in particular on novel empirical and computational studies of hierarchical navigational planning in humans and rodents

D2.7.1 SP2 Human Brain Organisation - Results for SGA2 Year 1

WPs involved: WP2.1, WP2.2., WP2.3, WP2.4, WP2.5, WP2.6 & WP2.7 Summary of SP Results for M1-12

D2.5.1 CDP4 Visuo-Motor Integration - Results for SGA2 Year 2

CDP4 Annual compound deliverable Year 2 Overview of Key Results and Impact achieved in M13 to M24, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.)

D8.6.2 CDP6 Results SGA2 Year 2 HPC-based chemical optimisation codes increasing ligand specificity toward receptors' subclasses

CDP6 Annual compound deliverable Year 2 Overview of Key Results and Impact achieved in M13 to M24, tailored for presentation to the relevant audiences (research/industry/public) References to HBP/SP/CDP objectives and Use Cases for navigation between multiple Sub-Projects Linkage of Results to components/a set of component fact sheets (lower level information: Component ownership, Technology Readiness level, performed Quality Control checks, etc.) This deliverable will also refer to results for SGA2_HPC-based screening protocols and implementation for accurate HPC-based screening protocols of neuro-drug candidates.

D8.9.2 Curated and tested brain disease ontologies integrated within application services

Brain ontologies are integrated and accessible through OLS-NEURO. All application services (OLS-NEURO, SCAIView-Neuro) are online and available for use in MIP.

D8.7.2 BIDS Apps for imaging data processing pipelines

Applications for the imaging data processing pipelines using the Brain Imaging Data Structure format.

D5.5.1 Reproducible scientific software release 2

This production release will make publicly available JupyterLab functionality optimized and integrated with HBP data management solutions and data service APIs (T5.5.2)

D8.5.2 Μedical Informatics Platform Releases - SOFTWARE & REPORT

SOFTWARE & REPORT

D7.5.1 HPAC Platform including CEA resources

The compute and storage resources of the new HPAC partner CEA are integrated into the HPAC Platform, including the corresponding documentation in the Guidebook. The implementation of a use case workflow is used to demonstrate the functionality and documented in a short report.

D7.4.1 HBP Visualisation Software Catalogue

The HBP Visualisation Catalogue gives an overview of all visualisation tools and methods available in the HBP. It is a publicly available website that is also integrated into the Collaboratory. It contains semantic query functionality to support users in finding the right visualisation method and software for their specific needs.

Publications

Superficial white matter: A review on the dMRI analysis methods and applications

Auteurs: Miguel Guevara, Pamela Guevara, Claudio Román, Jean-François Mangin
Publié dans: NeuroImage, Numéro 212, 2020, Page(s) 116673, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2020.116673

Unveiling the Synaptic Function and Structure Using Paired Recordings From Synaptically Coupled Neurons

Auteurs: Guanxiao Qi, Danqing Yang, Chao Ding, Dirk Feldmeyer
Publié dans: Frontiers in Synaptic Neuroscience, Numéro 12, 2020, ISSN 1663-3563
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fnsyn.2020.00005

Multi-scale account of the network structure of macaque visual cortex

Auteurs: Maximilian Schmidt, Rembrandt Bakker, Claus C. Hilgetag, Markus Diesmann, Sacha J. van Albada
Publié dans: Brain Structure and Function, Numéro 223/3, 2018, Page(s) 1409-1435, ISSN 1863-2653
Éditeur: Springer Verlag
DOI: 10.1007/s00429-017-1554-4

Cortical layers: Cyto-, myelo-, receptor- and synaptic architecture in human cortical areas

Auteurs: Nicola Palomero-Gallagher, Karl Zilles
Publié dans: NeuroImage, Numéro 197, 2019, Page(s) 716-741, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2017.08.035

Mechanisms Underlying the Neuromodulation of Spinal Circuits for Correcting Gait and Balance Deficits after Spinal Cord Injury

Auteurs: Eduardo Martin Moraud, Marco Capogrosso, Emanuele Formento, Nikolaus Wenger, Jack DiGiovanna, Grégoire Courtine, Silvestro Micera
Publié dans: Neuron, Numéro 89/4, 2016, Page(s) 814-828, ISSN 0896-6273
Éditeur: Cell Press
DOI: 10.1016/j.neuron.2016.01.009

Electron Microscopic Detection of Single Membrane Proteins by a Specific Chemical Labeling

Auteurs: Shigekazu Tabata, Marijo Jevtic, Nobutaka Kurashige, Hirokazu Fuchida, Munetsugu Kido, Kazushi Tani, Naoki Zenmyo, Shohei Uchinomiya, Harumi Harada, Makoto Itakura, Itaru Hamachi, Ryuichi Shigemoto, Akio Ojida
Publié dans: iScience, Numéro 22, 2019, Page(s) 256-268, ISSN 2589-0042
Éditeur: Elsevier BV
DOI: 10.1016/j.isci.2019.11.025

Study of the Size and Shape of Synapses in the Juvenile Rat Somatosensory Cortex with 3D Electron Microscopy

Auteurs: Andrea Santuy, José-Rodrigo Rodríguez, Javier DeFelipe, Angel Merchán-Pérez
Publié dans: eneuro, Numéro 5/1, 2018, Page(s) ENEURO.0377-17.2017, ISSN 2373-2822
Éditeur: Society for Neuroscience
DOI: 10.1523/eneuro.0377-17.2017

Demonstrating Advantages of Neuromorphic Computation: A Pilot Study

Auteurs: Timo Wunderlich, Akos F. Kungl, Eric Müller, Andreas Hartel, Yannik Stradmann, Syed Ahmed Aamir, Andreas Grübl, Arthur Heimbrecht, Korbinian Schreiber, David Stöckel, Christian Pehle, Sebastian Billaudelle, Gerd Kiene, Christian Mauch, Johannes Schemmel, Karlheinz Meier, Mihai A. Petrovici
Publié dans: Frontiers in Neuroscience, Numéro 13, 2019, ISSN 1662-453X
Éditeur: Frontiers Media SA
DOI: 10.3389/fnins.2019.00260

Large-Scale Simulations of Plastic Neural Networks on Neuromorphic Hardware

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Large-scale neuromorphic computing systems

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Active head motion reduction in magnetic resonance imaging using tactile feedback

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Architectonic Mapping of the Human Brain beyond Brodmann

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Developmental Changes of Glutamate and GABA Receptor Densities in Wistar Rats

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Spatial registration of serial microscopic brain images to three-dimensional reference atlases with the QuickNII tool

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The Right Dorsal Premotor Mosaic: Organization, Functions, and Connectivity

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Posterior Thalamic Nucleus Modulation of Tactile Stimuli Processing in Rat Motor and Primary Somatosensory Cortices

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An automated home-cage-based 5-choice serial reaction time task for rapid assessment of attention and impulsivity in rats

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Reproducible Neural Network Simulations: Statistical Methods for Model Validation on the Level of Network Activity Data

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Diattenuation Imaging reveals different brain tissue properties

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Generalizing age effects on brain structure and cognition: A two-study comparison approach

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Roles for globus pallidus externa revealed in a computational model of action selection in the basal ganglia

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A Fast Solver for Large Tridiagonal Systems on Multi-Core Processors (Lass Library)

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Computational geometry for modeling neural populations: From visualization to simulation

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Population shrinkage of covariance (PoSCE) for better individual brain functional-connectivity estimation

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Body Randomization Reduces the Sim-to-Real Gap for Compliant Quadruped Locomotion

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Fiber length profiling: A novel approach to structural brain organization

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Modeling the Encoding of Saccade Kinematic Metrics in the Purkinje Cell Layer of the Cerebellar Vermis

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Cytoarchitectonic segregation of human posterior intraparietal and adjacent parieto-occipital sulcus and its relation to visuomotor and cognitive functions

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Correction: Dose response of the 16p11.2 distal copy number variant on intracranial volume and basal ganglia

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The circuit architecture of cortical multisensory processing: Distinct functions jointly operating within a common anatomical network

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Reappearance of Command-Following Is Associated With the Recovery of Language and Internal-Awareness Networks: A Longitudinal Multiple-Case Report

Auteurs: Charlène Aubinet, Rajanikant Panda, Stephen Karl Larroque, Helena Cassol, Mohamed Ali Bahri, Manon Carrière, Sarah Wannez, Steve Majerus, Steven Laureys, Aurore Thibaut
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Patterns of Dendritic Basal Field Orientation of Pyramidal Neurons in the Rat Somatosensory Cortex

Auteurs: Ignacio Leguey, Ruth Benavides-Piccione, Concepción Rojo, Pedro Larrañaga, Concha Bielza, Javier DeFelipe
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Control of a Humanoid NAO Robot by an Adaptive Bioinspired Cerebellar Module in 3D Motion Tasks

Auteurs: Alberto Antonietti, Dario Martina, Claudia Casellato, Egidio D’Angelo, Alessandra Pedrocchi
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Combining lifestyle risks to disentangle brain structure and functional connectivity differences in older adults

Auteurs: Nora Bittner, Christiane Jockwitz, Thomas W. Mühleisen, Felix Hoffstaedter, Simon B. Eickhoff, Susanne Moebus, Ute J. Bayen, Sven Cichon, Karl Zilles, Katrin Amunts, Svenja Caspers
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A Method for the Symbolic Representation of Neurons

Auteurs: Jose Juan Aliaga Maraver, Susana Mata, Ruth Benavides-Piccione, Javier DeFelipe, Luis Pastor
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Multimodal Modeling of Neural Network Activity: Computing LFP, ECoG, EEG, and MEG Signals With LFPy 2.0

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Sleep deprivation differentially affects subcomponents of cognitive control

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How does the presence of neural probes affect extracellular potentials?

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Genes, Cells and Brain Areas of Intelligence

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Controlling seizure propagation in large-scale brain networks

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Making the Environment an Informative Place: A Conceptual Analysis of Epistemic Policies and Sensorimotor Coordination

Auteurs: Giovanni Pezzulo, Stefano Nolfi
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MEDUSA: A GPU-based tool to create realistic phantoms of the brain microstructure using tiny spheres

Auteurs: Kévin Ginsburger, Felix Matuschke, Fabrice Poupon, Jean-François Mangin, Markus Axer, Cyril Poupon
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Empirical examination of the replicability of associations between brain structure and psychological variables

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Human consciousness is supported by dynamic complex patterns of brain signal coordination

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Electrical Compartmentalization in Neurons

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Reconstructing imagined letters from early visual cortex reveals tight topographic correspondence between visual mental imagery and perception

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Editorial: Between Theory and Clinic: The Contribution of Neuroimaging in the Field of Consciousness Disorders

Auteurs: Olivia Gosseries, Caroline Schnakers, Steven Laureys
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What Can Computational Models Contribute to Neuroimaging Data Analytics?

Auteurs: Oleksandr V. Popovych, Thanos Manos, Felix Hoffstaedter, Simon B. Eickhoff
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Default Mode Network Structural Integrity and Cerebellar Connectivity Predict Information Processing Speed Deficit in Multiple Sclerosis

Auteurs: Giovanni Savini, Matteo Pardini, Gloria Castellazzi, Alessandro Lascialfari, Declan Chard, Egidio D’Angelo, Claudia A. M. Gandini Wheeler-Kingshott
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SpiNNTools: The Execution Engine for the SpiNNaker Platform

Auteurs: Andrew G. D. Rowley, Christian Brenninkmeijer, Simon Davidson, Donal Fellows, Andrew Gait, David R. Lester, Luis A. Plana, Oliver Rhodes, Alan B. Stokes, Steve B. Furber
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Clinical and electrophysiological investigation of spastic muscle overactivity in patients with disorders of consciousness following severe brain injury

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Rationally designed azobenzene photoswitches for efficient two-photon neuronal excitation

Auteurs: Gisela Cabré, Aida Garrido-Charles, Miquel Moreno, Miquel Bosch, Montserrat Porta-de-la-Riva, Michael Krieg, Marta Gascón-Moya, Núria Camarero, Ricard Gelabert, José M. Lluch, Félix Busqué, Jordi Hernando, Pau Gorostiza, Ramon Alibés
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Drug Addiction: From Neuroscience to Ethics

Auteurs: Michele Farisco, Kathinka Evers, Jean-Pierre Changeux
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Parkinson's disease: Is it a consequence of human brain evolution?

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Differential influences of environment and self-motion on place and grid cell firing

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A Computational Model of Visual Recognition Memory via Grid Cells

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Efficient Reward-Based Structural Plasticity on a SpiNNaker 2 Prototype

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Tailored Sample Mounting for Light-Sheet Fluorescence Microscopy of Clarified Specimens by Polydimethylsiloxane Casting

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Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines

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Areal differences in depth cue integration between monkey and human

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Large and fast human pyramidal neurons associate with intelligence

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InTool Explorer: An Interactive Exploratory Analysis Tool for Versatile Visualizations of Neuroscientific Data

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CAN SUBJECTIVE RATINGS OF ABSORPTION, DISSOCIATION, AND TIME PERCEPTION DURING “NEUTRAL HYPNOSIS” PREDICT HYPNOTIZABILITY?: An exploratory study

Auteurs: Audrey Vanhaudenhuyse, Didier ledoux, Olivia Gosseries, Athena Demertzi, Steven Laureys, Marie-Elisabeth Faymonville
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Columnar clusters in the human motion complex reflect consciously perceived motion axis

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Large Scale Double-Path Illumination System with Split Field of View for the All-Optical Study of Inter-and Intra-Hemispheric Functional Connectivity on Mice

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Long-Lasting Response Changes in Deep Cerebellar Nuclei in vivo Correlate With Low-Frequency Oscillations

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The Human Brain Project: Responsible Brain Research for the Benefit of Society

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Rigorous Neural Network Simulations: A Model Substantiation Methodology for Increasing the Correctness of Simulation Results in the Absence of Experimental Validation Data

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Alterations in Schizophrenia-Associated Genes Can Lead to Increased Power in Delta Oscillations

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Complex Dynamics in Simplified Neuronal Models: Reproducing Golgi Cell Electroresponsiveness

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Spontaneous activity emerging from an inferred network model captures complex spatio-temporal dynamics of spike data

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A Cell Atlas for the Mouse Brain

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Efficient region-based test strategy uncovers genetic risk factors for functional outcome in bipolar disorder

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Assessing robustness against potential publication bias in Activation Likelihood Estimation (ALE) meta-analyses for fMRI

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Atlases of cognition with large-scale human brain mapping

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Targeted Nanoswitchable Inhibitors of Protein–Protein Interactions Involved in Apoptosis

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Photoswitchable Antimetabolite for Targeted Photoactivated Chemotherapy

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eQTL of KCNK2 regionally influences the brain sulcal widening: evidence from 15,597 UK Biobank participants with neuroimaging data

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Biocytin Recovery and 3D Reconstructions of Filled Hippocampal CA2 Interneurons

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A regularity index for dendrites - local statistics of a neuron's input space

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Lateral inhibition by Martinotti interneurons is facilitated by cholinergic inputs in human and mouse neocortex

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A multi-scale layer-resolved spiking network model of resting-state dynamics in macaque visual cortical areas

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Memory-Efficient Deep Learning on a SpiNNaker 2 Prototype

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Propofol-induced unresponsiveness is associated with impaired feedforward connectivity in cortical hierarchy

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VIOLA—A Multi-Purpose and Web-Based Visualization Tool for Neuronal-Network Simulation Output

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Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons

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A Simple Model for Low Variability in Neural Spike Trains

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Role of Extracellular Loops and Membrane Lipids for Ligand Recognition in the Neuronal Adenosine Receptor Type 2A: An Enhanced Sampling Simulation Study

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Code Generation in Computational Neuroscience: A Review of Tools and Techniques

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Evoked Alpha Power is Reduced in Disconnected Consciousness During Sleep and Anesthesia

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Sleep-like cortical OFF-periods disrupt causality and complexity in the brain of unresponsive wakefulness syndrome patients

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Electrical spinal cord stimulation must preserve proprioception to enable locomotion in humans with spinal cord injury

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CABots and Other Neural Agents

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Meditation-induced modulation of brain response to transcranial magnetic stimulation

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High-Fidelity Imaging in Brain-Wide Structural Studies Using Light-Sheet Microscopy

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Automatically Selecting a Suitable Integration Scheme for Systems of Differential Equations in Neuron Models

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Optimal Sequence Memory in Driven Random Networks

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Sensory Processing Across Conscious and Nonconscious Brain States: From Single Neurons to Distributed Networks for Inferential Representation

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Navigating the Murine Brain: Toward Best Practices for Determining and Documenting Neuroanatomical Locations in Experimental Studies

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Targeted neurotechnology restores walking in humans with spinal cord injury

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Conditioning sharpens the spatial representation of rewarded stimuli in mouse primary visual cortex

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The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow

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Derivation of Fiber Orientations From Oblique Views Through Human Brain Sections in 3D-Polarized Light Imaging

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Combining biophysical modeling and deep learning for multielectrode array neuron localization and classification

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Architecture of the Mouse Brain Synaptome

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Audiovisual Integration Enhances Stimulus Detection Performance in Mice

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Cytoarchitecture, probability maps, and functions of the human supplementary and pre-supplementary motor areas

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Conscious While Being Considered in an Unresponsive Wakefulness Syndrome for 20 Years

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Whole-Brain Vasculature Reconstruction at the Single Capillary Level

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Model-based spatial navigation in the hippocampus-ventral striatum circuit: A computational analysis

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The Combinatorial Creature: Cortical Phenotypes within and across Lifetimes

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Defined astrocytic expression of human amyloid precursor protein in Tg2576 mouse brain

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Brain, Behavior, and Cognitive Interplay in Disorders of Consciousness: A Multiple Case Study

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Acetylcholine Neurotransmitter Receptor Densities in the Striatum of Hemiparkinsonian Rats Following Botulinum Neurotoxin-A Injection

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Probabilistic electrical stimulation mapping of human medial frontal cortex

Auteurs: Gianluca Trevisi, Simon B. Eickhoff, Fahmida Chowdhury, Ashwani Jha, Roman Rodionov, Mark Nowell, Anna Miserocchi, Andrew W. McEvoy, Parashkev Nachev, Beate Diehl
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A lack of consistent brain alterations in insomnia disorder: An activation likelihood estimation meta-analysis

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A Mixed-Signal Structured AdEx Neuron for Accelerated Neuromorphic Cores

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Regional Diversity in the Postsynaptic Proteome of the Mouse Brain

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A Quantitative Study on the Distribution of Mitochondria in the Neuropil of the Juvenile Rat Somatosensory Cortex

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Eligibility Traces and Plasticity on Behavioral Time Scales: Experimental Support of NeoHebbian Three-Factor Learning Rules

Auteurs: Wulfram Gerstner, Marco Lehmann, Vasiliki Liakoni, Dane Corneil, Johanni Brea
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Activations of deep convolutional neural networks are aligned with gamma band activity of human visual cortex

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Identification of ADHD risk genes in extended pedigrees by combining linkage analysis and whole-exome sequencing

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Cerebrospinal Fluid-Contacting Neurons Sense pH Changes and Motion in the Hypothalamus

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Unilateral Botulinum Neurotoxin-A Injection into the Striatum of C57BL/6 Mice Leads to a Different Motor Behavior Compared with Rats

Auteurs: Veronica Antipova, Andreas Wree, Carsten Holzmann, Teresa Mann, Nicola Palomero-Gallagher, Karl Zilles, Oliver Schmitt, Alexander Hawlitschka
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A Perspective on Cortical Layering and Layer-Spanning Neuronal Elements

Auteurs: Matthew E. Larkum, Lucy S. Petro, Robert N. S. Sachdev, Lars Muckli
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Parallel Distribution of an Inner Hair Cell and Auditory Nerve Model for Real-Time Application

Auteurs: Robert James, Jim Garside, Luis A. Plana, Andrew Rowley, Steve B. Furber
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Clinical subcategorization of minimally conscious state according to resting functional connectivity

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Maximum-entropy models reveal the excitatory and inhibitory correlation structures in cortical neuronal activity

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Uncertainty quantification, propagation and characterization by Bayesian analysis combined with global sensitivity analysis applied to dynamical intracellular pathway models

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Spatial cell firing during virtual navigation of open arenas by head-restrained mice

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Behavioral Context Determines Network State and Variability Dynamics in Monkey Motor Cortex

Auteurs: Alexa Riehle, Thomas Brochier, Martin Nawrot, Sonja Grün
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Excitable neuronal assemblies with adaptation as a building block of brain circuits for velocity-controlled signal propagation

Auteurs: Hesam Setareh, Moritz Deger, Wulfram Gerstner
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Investigating large-scale brain dynamics using field potential recordings: analysis and interpretation

Auteurs: Bijan Pesaran, Martin Vinck, Gaute T. Einevoll, Anton Sirota, Pascal Fries, Markus Siegel, Wilson Truccolo, Charles E. Schroeder, Ramesh Srinivasan
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Apical Function in Neocortical Pyramidal Cells: A Common Pathway by Which General Anesthetics Can Affect Mental State

Auteurs: William A. Phillips, Talis Bachmann, Johan F. Storm
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h-Type Membrane Current Shapes the Local Field Potential from Populations of Pyramidal Neurons

Auteurs: Torbjørn V. Ness, Michiel W.H. Remme, Gaute T. Einevoll
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Structural Plasticity on the SpiNNaker Many-Core Neuromorphic System

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An Accelerated LIF Neuronal Network Array for a Large-Scale Mixed-Signal Neuromorphic Architecture

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Human Cortical Pyramidal Neurons: From Spines to Spikes via Models

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Phase-lags in large scale brain synchronization: Methodological considerations and in-silico analysis

Auteurs: Spase Petkoski, J. Matias Palva, Viktor K. Jirsa
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Spiking neurons with short-term synaptic plasticity form superior generative networks

Auteurs: Luziwei Leng, Roman Martel, Oliver Breitwieser, Ilja Bytschok, Walter Senn, Johannes Schemmel, Karlheinz Meier, Mihai A. Petrovici
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Identification and visualization of protein binding regions with the ArDock server

Auteurs: Sébastien Reille, Mélanie Garnier, Xavier Robert, Patrice Gouet, Juliette Martin, Guillaume Launay
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The role of ethics in data governance of large neuro-ICT projects

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A molecular dynamics study of adenylyl cyclase: The impact of ATP and G-protein binding

Auteurs: Elisa Frezza, Juliette Martin, Richard Lavery
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Contribution of the Axon Initial Segment to Action Potentials Recorded Extracellularly

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Individual Brain Charting, a high-resolution fMRI dataset for cognitive mapping

Auteurs: Ana Luísa Pinho, Alexis Amadon, Torsten Ruest, Murielle Fabre, Elvis Dohmatob, Isabelle Denghien, Chantal Ginisty, Séverine Becuwe-Desmidt, Séverine Roger, Laurence Laurier, Véronique Joly-Testault, Gaëlle Médiouni-Cloarec, Christine Doublé, Bernadette Martins, Philippe Pinel, Evelyn Eger, Gaël Varoquaux, Christophe Pallier, Stanislas Dehaene, Lucie Hertz-Pannier, Bertrand Thirion
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Impaired hippocampal representation of place in the Fmr1-knockout mouse model of fragile X syndrome

Auteurs: Tara Arbab, Cyriel M. A. Pennartz, Francesco P. Battaglia
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3D morphology-based clustering and simulation of human pyramidal cell dendritic spines

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Performance Comparison of the Digital Neuromorphic Hardware SpiNNaker and the Neural Network Simulation Software NEST for a Full-Scale Cortical Microcircuit Model

Auteurs: Sacha J. van Albada, Andrew G. Rowley, Johanna Senk, Michael Hopkins, Maximilian Schmidt, Alan B. Stokes, David R. Lester, Markus Diesmann, Steve B. Furber
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Towards a human self-regulation system: Common and distinct neural signatures of emotional and behavioural control

Auteurs: Robert Langner, Susanne Leiberg, Felix Hoffstaedter, Simon B. Eickhoff
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Framework based on communicability and flow to analyze complex network dynamics

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Randomized controlled trial of home-based 4-week tDCS in chronic minimally conscious state

Auteurs: Géraldine Martens, Nicolas Lejeune, Anthony Terrence O'Brien, Felipe Fregni, Charlotte Martial, Sarah Wannez, Steven Laureys, Aurore Thibaut
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A Digital Hardware Realization for Spiking Model of Cutaneous Mechanoreceptor

Auteurs: Nima Salimi-Nezhad, Mahmood Amiri, Egidio Falotico, Cecilia Laschi
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MultiMap: A Tool to Automatically Extract and Analyse Spatial Microscopic Data From Large Stacks of Confocal Microscopy Images

Auteurs: Gherardo Varando, Ruth Benavides-Piccione, Alberto Muñoz, Asta Kastanauskaite, Concha Bielza, Pedro Larrañaga, Javier DeFelipe
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Commentary: Locus Coeruleus Ablation Exacerbates Cognitive Deficits, Neuropathology, and Lethality in P301S Tau Transgenic Mice

Auteurs: Matthew J. Betts, Alexander J. Ehrenberg, Dorothea Hämmerer, Emrah Düzel
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The Predictive Coding Account of Psychosis

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Extracting orthogonal subject- and condition-specific signatures from fMRI data using whole-brain effective connectivity

Auteurs: Vicente Pallarés, Andrea Insabato, Ana Sanjuán, Simone Kühn, Dante Mantini, Gustavo Deco, Matthieu Gilson
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BCI Performance and Brain Metabolism Profile in Severely Brain-Injured Patients Without Response to Command at Bedside

Auteurs: Jitka Annen, Séverine Blandiaux, Nicolas Lejeune, Mohamed A. Bahri, Aurore Thibaut, Woosang Cho, Christoph Guger, Camille Chatelle, Steven Laureys
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Single-layer graphene modulates neuronal communication and augments membrane ion currents

Auteurs: Niccolò Paolo Pampaloni, Martin Lottner, Michele Giugliano, Alessia Matruglio, Francesco D’Amico, Maurizio Prato, Josè Antonio Garrido, Laura Ballerini, Denis Scaini
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Large-Scale Brain Simulation and Disorders of Consciousness. Mapping Technical and Conceptual Issues

Auteurs: Michele Farisco, Jeanette H. Kotaleski, Kathinka Evers
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Mapping Cortical Laminar Structure in the 3D BigBrain

Auteurs: Konrad Wagstyl, Claude Lepage, Sebastian Bludau, Karl Zilles, Paul C Fletcher, Katrin Amunts, Alan C Evans
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Computational Models for Calcium-Mediated Astrocyte Functions

Auteurs: Tiina Manninen, Riikka Havela, Marja-Leena Linne
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Scale-freeness or partial synchronization in neural mass phase oscillator networks: Pick one of two?

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Resistance to eye opening in patients with disorders of consciousness

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A Dynamic Connectome Supports the Emergence of Stable Computational Function of Neural Circuits through Reward-Based Learning

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Challenges in Reproducibility, Replicability, and Comparability of Computational Models and Tools for Neuronal and Glial Networks, Cells, and Subcellular Structures

Auteurs: Tiina Manninen, Jugoslava Aćimović, Riikka Havela, Heidi Teppola, Marja-Leena Linne
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Molecular composition of the human primary visual cortex profiled by multimodal mass spectrometry imaging

Auteurs: Estibaliz González de San Román, Hans-Jürgen Bidmon, Milena Malisic, Iuliana Susnea, Astrid Küppers, Rene Hübbers, Andreas Wree, Volker Nischwitz, Katrin Amunts, Pitter F. Huesgen
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On a Recursive Construction of Circular Paths and the Search for $$\pi $$ π on the Integer Lattice $$\mathbb {Z}^2$$ Z

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bnclassify: Learning Bayesian Network Classifiers

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A neural-level model of spatial memory and imagery

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Criteria on Balance, Stability, and Excitability in Cortical Networks for Constraining Computational Models

Auteurs: Andrei Maksimov, Markus Diesmann, Sacha J. van Albada
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[Re] A neural model of the saccade generator in the reticular formation

Auteurs: Mario Senden, Jannis Schuecker, Jan Hahne, Markus Diesmann, Rainer Goebel
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An Ion-Permeable State of the Glycine Receptor Captured by Molecular Dynamics

Auteurs: Adrien Henri Cerdan, Nicolas Éric Martin, Marco Cecchini
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Neuroethics and Philosophy in Responsible Research and Innovation: The Case of the Human Brain Project

Auteurs: Arleen Salles, Kathinka Evers, Michele Farisco
Publié dans: Neuroethics, 2018, ISSN 1874-5490
Éditeur: Springer Science Business Media
DOI: 10.1007/s12152-018-9372-9

Searching for visual features that explain response variance of face neurons in inferior temporal cortex

Auteurs: Takashi Owaki, Michel Vidal-Naquet, Yunjun Nam, Go Uchida, Takayuki Sato, Hideyuki Câteau, Shimon Ullman, Manabu Tanifuji
Publié dans: PLOS ONE, Numéro 13/9, 2018, Page(s) e0201192, ISSN 1932-6203
Éditeur: Public Library of Science
DOI: 10.1371/journal.pone.0201192

Widespread white matter microstructural abnormalities in bipolar disorder: evidence from mega- and meta-analyses across 3033 individuals

Auteurs: Pauline Favre, Melissa Pauling, Jacques Stout, Franz Hozer, Samuel Sarrazin, Christoph Abé, Martin Alda, Clara Alloza, Silvia Alonso-Lana, Ole A. Andreassen, Bernhard T. Baune, Francesco Benedetti, Geraldo F. Busatto, Erick J. Canales-Rodríguez, Xavier Caseras, Tiffany Moukbel Chaim-Avancini, Christopher R. K. Ching, Udo Dannlowski, Michael Deppe, Lisa T. Eyler, Mar Fatjo-Vilas, Sonya F. Foley,
Publié dans: Neuropsychopharmacology, Numéro 44/13, 2019, Page(s) 2285-2293, ISSN 0893-133X
Éditeur: Nature Publishing Group
DOI: 10.1038/s41386-019-0485-6

Receptor density pattern confirms and enhances the anatomic-functional features of the macaque superior parietal lobule areas

Auteurs: Daniele Impieri, Karl Zilles, Meiqi Niu, Lucija Rapan, Nicole Schubert, Claudio Galletti, Nicola Palomero-Gallagher
Publié dans: Brain Structure and Function, Numéro 224/8, 2019, Page(s) 2733-2756, ISSN 1863-2653
Éditeur: Springer Verlag
DOI: 10.1007/s00429-019-01930-9

Differential expression of secretagogin immunostaining in the hippocampal formation and the entorhinal and perirhinal cortices of humans, rats, and mice

Auteurs: Silvia Tapia‐González, Ricardo Insausti, Javier DeFelipe
Publié dans: Journal of Comparative Neurology, Numéro 528/4, 2019, Page(s) 523-541, ISSN 0021-9967
Éditeur: John Wiley & Sons Inc.
DOI: 10.1002/cne.24773

The Role of Top-Down Modulation in Shaping Sensory Processing Across Brain States: Implications for Consciousness

Auteurs: Tom Sikkens, Conrado A. Bosman, Umberto Olcese
Publié dans: Frontiers in Systems Neuroscience, Numéro 13, 2019, ISSN 1662-5137
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fnsys.2019.00031

The role of the optic tectum for visually evoked orienting and evasive movements

Auteurs: Daichi G. Suzuki, Juan Pérez-Fernández, Tobias Wibble, Andreas A. Kardamakis, Sten Grillner
Publié dans: Proceedings of the National Academy of Sciences, Numéro 116/30, 2019, Page(s) 15272-15281, ISSN 0027-8424
Éditeur: National Academy of Sciences
DOI: 10.1073/pnas.1907962116

KBbox: A Toolbox of Computational Methods for Studying the Kinetics of Molecular Binding

Auteurs: Neil J. Bruce, Gaurav K. Ganotra, Stefan Richter, Rebecca C. Wade
Publié dans: Journal of Chemical Information and Modeling, Numéro 59/9, 2019, Page(s) 3630-3634, ISSN 1549-9596
Éditeur: American Chemical Society
DOI: 10.1021/acs.jcim.9b00485

Somatotopic mapping of the human breast using 7 T functional MRI

Auteurs: Jop Beugels, Job van den Hurk, Judith C. Peters, Esther M. Heuts, Stefania M.H. Tuinder, Rainer Goebel, René R.W.J. van der Hulst
Publié dans: NeuroImage, Numéro 204, 2020, Page(s) 116201, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2019.116201

Neuromorphic Hardware Learns to Learn

Auteurs: Thomas Bohnstingl, Franz Scherr, Christian Pehle, Karlheinz Meier, Wolfgang Maass
Publié dans: Frontiers in Neuroscience, Numéro 13, 2019, ISSN 1662-453X
Éditeur: Frontiers Media SA
DOI: 10.3389/fnins.2019.00483

The neglected medial part of macaque area PE: segregated processing of reach depth and direction

Auteurs: Marina De Vitis, Rossella Breveglieri, Konstantinos Hadjidimitrakis, Wim Vanduffel, Claudio Galletti, Patrizia Fattori
Publié dans: Brain Structure and Function, Numéro 224/7, 2019, Page(s) 2537-2557, ISSN 1863-2653
Éditeur: Springer Verlag
DOI: 10.1007/s00429-019-01923-8

Task-dependent functional organizations of the visual ventral stream

Auteurs: Han-Gue Jo, Junji Ito, Barbara Schulte Holthausen, Conrad Baumann, Sonja Grün, Ute Habel, Thilo Kellermann
Publié dans: Scientific Reports, Numéro 9/1, 2019, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-019-45707-w

Indicators and Criteria of Consciousness in Animals and Intelligent Machines: An Inside-Out Approach

Auteurs: Cyriel M. A. Pennartz, Michele Farisco, Kathinka Evers
Publié dans: Frontiers in Systems Neuroscience, Numéro 13, 2019, ISSN 1662-5137
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fnsys.2019.00025

3D Electron Microscopy Study of Synaptic Organization of the Normal Human Transentorhinal Cortex and Its Possible Alterations in Alzheimer’s Disease

Auteurs: Domínguez-Álvaro M, Montero-Crespo M, Blazquez-Llorca L, DeFelipe J, Alonso-Nanclares L
Publié dans: eNeuro, 2019, ISSN 2373-2822
Éditeur: Society for Neuroscience
DOI: 10.1523/eneuro

Scaling of a Large-Scale Simulation of Synchronous Slow-Wave and Asynchronous Awake-Like Activity of a Cortical Model With Long-Range Interconnections

Auteurs: Elena Pastorelli, Cristiano Capone, Francesco Simula, Maria V. Sanchez-Vives, Paolo Del Giudice, Maurizio Mattia, Pier Stanislao Paolucci
Publié dans: Frontiers in Systems Neuroscience, Numéro 13, 2019, ISSN 1662-5137
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fnsys.2019.00033

Group I mGluR-Mediated Activation of Martinotti Cells Inhibits Local Cortical Circuitry in Human Cortex

Auteurs: Tim Kroon, Julia Dawitz, Ioannis Kramvis, Jasper Anink, Joshua Obermayer, Matthijs B. Verhoog, René Wilbers, Natalia A. Goriounova, Sander Idema, Johannes C. Baayen, Eleonora Aronica, Huibert D. Mansvelder, Rhiannon M. Meredith
Publié dans: Frontiers in Cellular Neuroscience, Numéro 13, 2019, ISSN 1662-5102
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fncel.2019.00315

Bilingualism and “brain reserve”: a matter of age

Auteurs: Stefan Heim, Johanna Stumme, Nora Bittner, Christiane Jockwitz, Katrin Amunts, Svenja Caspers
Publié dans: Neurobiology of Aging, Numéro 81, 2019, Page(s) 157-165, ISSN 0197-4580
Éditeur: Elsevier BV
DOI: 10.1016/j.neurobiolaging.2019.05.021

The need for a conceptual expansion of neuroethics

Auteurs: Salles A., Evers K., Farisco M.
Publié dans: AJOB Neuroscience, 2019, ISSN 2150-7759
Éditeur: Taylor and Francis
DOI: 10.1080/21507740.1632972

The hidden repertoire of brain dynamics and dysfunction

Auteurs: Anthony R. McIntosh, Viktor K. Jirsa
Publié dans: Network Neuroscience, Numéro 3/4, 2019, Page(s) 994-1008, ISSN 2472-1751
Éditeur: MIT Press - Journals
DOI: 10.1162/netn_a_00107

An algorithm for learning shape and appearance models without annotations

Auteurs: John Ashburner, Mikael Brudfors, Kevin Bronik, Yaël Balbastre
Publié dans: Medical Image Analysis, Numéro 55, 2019, Page(s) 197-215, ISSN 1361-8415
Éditeur: Elsevier BV
DOI: 10.1016/j.media.2019.04.008

odMLtables: A User-Friendly Approach for Managing Metadata of Neurophysiological Experiments

Auteurs: Julia Sprenger, Lyuba Zehl, Jana Pick, Michael Sonntag, Jan Grewe, Thomas Wachtler, Sonja Grün, Michael Denker
Publié dans: Frontiers in Neuroinformatics, Numéro 13, 2019, ISSN 1662-5196
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fninf.2019.00062

Investigating targets for neuropharmacological intervention by molecular dynamics simulations

Auteurs: Giulia Rossetti, Achim Kless, Luhua Lai, Tiago F. Outeiro, Paolo Carloni
Publié dans: Biochemical Society Transactions, Numéro 47/3, 2019, Page(s) 909-918, ISSN 0300-5127
Éditeur: Portland Press, Ltd.
DOI: 10.1042/bst20190048

A kinetic model for Brain-Derived Neurotrophic Factor mediated spike timing-dependent LTP

Auteurs: Sergio M. G. Solinas, Elke Edelmann, Volkmar Leßmann, Michele Migliore
Publié dans: PLOS Computational Biology, Numéro 15/4, 2019, Page(s) e1006975, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/journal.pcbi.1006975

Grand Unified Theories of the Brain Need Better Understanding of Behavior: The Two-Tiered Emergence of Function

Auteurs: Viktor K. Jirsa, Anthony R. McIntosh, Raoul Huys
Publié dans: Ecological Psychology, Numéro 31/3, 2019, Page(s) 152-165, ISSN 1040-7413
Éditeur: Lawrence Erlbaum Associates Inc.
DOI: 10.1080/10407413.2019.1615207

Reconstruction and Simulation of a Scaffold Model of the Cerebellar Network

Auteurs: Stefano Casali, Elisa Marenzi, Chaitanya Medini, Claudia Casellato, Egidio D'Angelo
Publié dans: Frontiers in Neuroinformatics, Numéro 13, 2019, ISSN 1662-5196
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fninf.2019.00037

Optogenetics in Brain Research: From a Strategy to Investigate Physiological Function to a Therapeutic Tool

Auteurs: Elena Montagni, Francesco Resta, Anna Letizia Allegra Mascaro, Francesco Saverio Pavone
Publié dans: Photonics, Numéro 6/3, 2019, Page(s) 92, ISSN 2304-6732
Éditeur: MDPI AG
DOI: 10.3390/photonics6030092

FAConstructor: an interactive tool for geometric modeling of nerve fiber architectures in the brain

Auteurs: Jan André Reuter, Felix Matuschke, Miriam Menzel, Nicole Schubert, Kévin Ginsburger, Cyril Poupon, Katrin Amunts, Markus Axer
Publié dans: International Journal of Computer Assisted Radiology and Surgery, Numéro 14/11, 2019, Page(s) 1881-1889, ISSN 1861-6410
Éditeur: Springer Verlag
DOI: 10.1007/s11548-019-02053-6

Discrimination of the hierarchical structure of cortical layers in 2-photon microscopy data by combined unsupervised and supervised machine learning

Auteurs: Dong Li, Melissa Zavaglia, Guangyu Wang, Hong Xie, Yi Hu, Rene Werner, Ji-Song Guan, Claus C. Hilgetag
Publié dans: Scientific Reports, Numéro 9/1, 2019, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-019-43432-y

The subthreshold-active KV7 current regulates neurotransmission by limiting spike-induced Ca2+ influx in hippocampal mossy fiber synaptic terminals

Auteurs: Katiuscia Martinello, Elisabetta Giacalone, Michele Migliore, David A. Brown, Mala M. Shah
Publié dans: Communications Biology, Numéro 2/1, 2019, ISSN 2399-3642
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/s42003-019-0408-4

Network analysis of whole-brain fMRI dynamics: A new framework based on dynamic communicability

Auteurs: Matthieu Gilson, Nikos E. Kouvaris, Gustavo Deco, Jean-François Mangin, Cyril Poupon, Sandrine Lefranc, Denis Rivière, Gorka Zamora-López
Publié dans: NeuroImage, Numéro 201, 2019, Page(s) 116007, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2019.116007

Alteration of the Cortex Shape as a Proxy of White Matter Swelling in Severe Cerebral Small Vessel Disease

Auteurs: François De Guio, David Germanaud, Julien Lefèvre, Clara Fischer, Jean-François Mangin, Hugues Chabriat, Eric Jouvent
Publié dans: Frontiers in Neurology, Numéro 10, 2019, ISSN 1664-2295
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fneur.2019.00753

Sleep-like slow oscillations improve visual classification through synaptic homeostasis and memory association in a thalamo-cortical model

Auteurs: Cristiano Capone, Elena Pastorelli, Bruno Golosio, Pier Stanislao Paolucci
Publié dans: Scientific Reports, Numéro 9/1, 2019, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-019-45525-0

The Scientific Case for Brain Simulations

Auteurs: Gaute T. Einevoll, Alain Destexhe, Markus Diesmann, Sonja Grün, Viktor Jirsa, Marc de Kamps, Michele Migliore, Torbjørn V. Ness, Hans E. Plesser, Felix Schürmann
Publié dans: Neuron, Numéro 102/4, 2019, Page(s) 735-744, ISSN 0896-6273
Éditeur: Cell Press
DOI: 10.1016/j.neuron.2019.03.027

Towards a Unified View on Pathways and Functions of Neural Recurrent Processing

Auteurs: Cyriel M.A. Pennartz, Shirin Dora, Lars Muckli, Jeannette A.M. Lorteije
Publié dans: Trends in Neurosciences, Numéro 42/9, 2019, Page(s) 589-603, ISSN 0166-2236
Éditeur: Elsevier BV
DOI: 10.1016/j.tins.2019.07.005

Brainstem nucleus incertus controls contextual memory formation

Auteurs: András Szőnyi, Katalin E. Sos, Rita Nyilas, Dániel Schlingloff, Andor Domonkos, Virág T. Takács, Balázs Pósfai, Panna Hegedüs, James B. Priestley, Andrew L. Gundlach, Attila I. Gulyás, Viktor Varga, Attila Losonczy, Tamás F. Freund, Gábor Nyiri
Publié dans: Science, Numéro 364/6442, 2019, Page(s) eaaw0445, ISSN 0036-8075
Éditeur: American Association for the Advancement of Science
DOI: 10.1126/science.aaw0445

Optimization of surgical intervention outside the epileptogenic zone in the Virtual Epileptic Patient (VEP)

Auteurs: Sora An, Fabrice Bartolomei, Maxime Guye, Viktor Jirsa
Publié dans: PLOS Computational Biology, Numéro 15/6, 2019, Page(s) e1007051, ISSN 1553-7358
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/journal.pcbi.1007051

Sex Classification by Resting State Brain Connectivity

Auteurs: Susanne Weis, Kaustubh R Patil, Felix Hoffstaedter, Alessandra Nostro, B T Thomas Yeo, Simon B Eickhoff
Publié dans: Cerebral Cortex, 2019, ISSN 1047-3211
Éditeur: Oxford University Press
DOI: 10.1093/cercor/bhz129

An architectonic type principle integrates macroscopic cortico-cortical connections with intrinsic cortical circuits of the primate brain

Auteurs: Claus C. Hilgetag, Sarah F. Beul, Sacha J. van Albada, Alexandros Goulas
Publié dans: Network Neuroscience, Numéro 3/4, 2019, Page(s) 905-923, ISSN 2472-1751
Éditeur: MIT Press - Journals
DOI: 10.1162/netn_a_00100

Differential Structure of Hippocampal CA1 Pyramidal Neurons in the Human and Mouse

Auteurs: Ruth Benavides-Piccione, Mamen Regalado-Reyes, Isabel Fernaud-Espinosa, Asta Kastanauskaite, Silvia Tapia-González, Gonzalo León-Espinosa, Concepcion Rojo, Ricardo Insausti, Idan Segev, Javier DeFelipe
Publié dans: Cerebral Cortex, 2019, ISSN 1047-3211
Éditeur: Oxford University Press
DOI: 10.1093/cercor/bhz122

Ventral midbrain stimulation induces perceptual learning and cortical plasticity in primates

Auteurs: John T. Arsenault, Wim Vanduffel
Publié dans: Nature Communications, Numéro 10/1, 2019, ISSN 2041-1723
Éditeur: Nature Publishing Group
DOI: 10.1038/s41467-019-11527-9

Second type of criticality in the brain uncovers rich multiple-neuron dynamics

Auteurs: David Dahmen, Sonja Grün, Markus Diesmann, Moritz Helias
Publié dans: Proceedings of the National Academy of Sciences, Numéro 116/26, 2019, Page(s) 13051-13060, ISSN 0027-8424
Éditeur: National Academy of Sciences
DOI: 10.1073/pnas.1818972116

Awakening: Predicting external stimulation to force transitions between different brain states

Auteurs: Gustavo Deco, Josephine Cruzat, Joana Cabral, Enzo Tagliazucchi, Helmut Laufs, Nikos K. Logothetis, Morten L. Kringelbach
Publié dans: Proceedings of the National Academy of Sciences, Numéro 116/36, 2019, Page(s) 18088-18097, ISSN 0027-8424
Éditeur: National Academy of Sciences
DOI: 10.1073/pnas.1905534116

Effects of synaptic and myelin plasticity on learning in a network of Kuramoto phase oscillators

Auteurs: M. Karimian, D. Dibenedetto, M. Moerel, T. Burwick, R. L. Westra, P. De Weerd, M. Senden
Publié dans: Chaos: An Interdisciplinary Journal of Nonlinear Science, Numéro 29/8, 2019, Page(s) 083122, ISSN 1054-1500
Éditeur: American Institute of Physics
DOI: 10.1063/1.5092786

Intersectional observations of the Human Brain Project’s approach to sex and gender

Auteurs: B. Tyr Fothergill, William Knight, Bernd Carsten Stahl, Inga Ulnicane
Publié dans: Journal of Information, Communication and Ethics in Society, Numéro 17/2, 2019, Page(s) 128-144, ISSN 1477-996X
Éditeur: Emerald Group Publishing Ltd.
DOI: 10.1108/jices-11-2018-0091

Modulation of the spontaneous hemodynamic response function across levels of consciousness

Auteurs: Guo-Rong Wu, Carol Di Perri, Vanessa Charland-Verville, Charlotte Martial, Manon Carrière, Audrey Vanhaudenhuyse, Steven Laureys, Daniele Marinazzo
Publié dans: NeuroImage, Numéro 200, 2019, Page(s) 450-459, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2019.07.011

Common and distinct neural correlates of dual-tasking and task-switching: a meta-analytic review and a neuro-cognitive processing model of human multitasking

Auteurs: Britta Worringer, Robert Langner, Iring Koch, Simon B. Eickhoff, Claudia R. Eickhoff, Ferdinand C. Binkofski
Publié dans: Brain Structure and Function, Numéro 224/5, 2019, Page(s) 1845-1869, ISSN 1863-2653
Éditeur: Springer Verlag
DOI: 10.1007/s00429-019-01870-4

The Human Brain Project—Synergy between neuroscience, computing, informatics, and brain-inspired technologies

Auteurs: Katrin Amunts, Alois C. Knoll, Thomas Lippert, Cyriel M. A. Pennartz, Philippe Ryvlin, Alain Destexhe, Viktor K. Jirsa, Egidio D’Angelo, Jan G. Bjaalie
Publié dans: PLOS Biology, Numéro 17/7, 2019, Page(s) e3000344, ISSN 1545-7885
Éditeur: Public Library of Science (PLoS)
DOI: 10.1371/journal.pbio.3000344

Biologically plausible deep learning — But how far can we go with shallow networks?

Auteurs: Bernd Illing, Wulfram Gerstner, Johanni Brea
Publié dans: Neural Networks, Numéro 118, 2019, Page(s) 90-101, ISSN 0893-6080
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.neunet.2019.06.001

iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology

Auteurs: Christopher Holdgraf, Stefan Appelhoff, Stephan Bickel, Kristofer Bouchard, Sasha D’Ambrosio, Olivier David, Orrin Devinsky, Benjamin Dichter, Adeen Flinker, Brett L. Foster, Krzysztof J. Gorgolewski, Iris Groen, David Groppe, Aysegul Gunduz, Liberty Hamilton, Christopher J. Honey, Mainak Jas, Robert Knight, Jean-Philippe Lachaux, Jonathan C. Lau, Christopher Lee-Messer, Brian N. Lundstrom, Kai
Publié dans: Scientific Data, Numéro 6/1, 2019, ISSN 2052-4463
Éditeur: Springer Science and Business Media LLC
DOI: 10.1038/s41597-019-0105-7

Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging

Auteurs: Kirsten K. Osen, Jala Imad, Arvind E. Wennberg, Eszter A. Papp, Trygve B. Leergaard
Publié dans: NeuroImage, Numéro 199, 2019, Page(s) 38-56, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2019.05.016

Biophysical Psychiatry—How Computational Neuroscience Can Help to Understand the Complex Mechanisms of Mental Disorders

Auteurs: Tuomo Mäki-Marttunen, Tobias Kaufmann, Torbjørn Elvsåshagen, Anna Devor, Srdjan Djurovic, Lars T. Westlye, Marja-Leena Linne, Marcella Rietschel, Dirk Schubert, Stefan Borgwardt, Magdalena Efrim-Budisteanu, Francesco Bettella, Geir Halnes, Espen Hagen, Solveig Næss, Torbjørn V. Ness, Torgeir Moberget, Christoph Metzner, Andrew G. Edwards, Marianne Fyhn, Anders M. Dale, Gaute T. Einevoll, Ole
Publié dans: Frontiers in Psychiatry, Numéro 10, 2019, ISSN 1664-0640
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fpsyt.2019.00534

Differential neural dynamics underling pragmatic and semantic affordance processing in macaque ventral premotor cortex

Auteurs: Monica Maranesi, Stefania Bruni, Alessandro Livi, Francesco Donnarumma, Giovanni Pezzulo, Luca Bonini
Publié dans: Scientific Reports, Numéro 9/1, 2019, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-019-48216-y

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits

Auteurs: Padraig Gleeson, Matteo Cantarelli, Boris Marin, Adrian Quintana, Matt Earnshaw, Sadra Sadeh, Eugenio Piasini, Justas Birgiolas, Robert C. Cannon, N. Alex Cayco-Gajic, Sharon Crook, Andrew P. Davison, Salvador Dura-Bernal, András Ecker, Michael L. Hines, Giovanni Idili, Frederic Lanore, Stephen D. Larson, William W. Lytton, Amitava Majumdar, Robert A. McDougal, Subhashini Sivagnanam, Sergio Solin
Publié dans: Neuron, Numéro 103/3, 2019, Page(s) 395-411.e5, ISSN 0896-6273
Éditeur: Cell Press
DOI: 10.1016/j.neuron.2019.05.019

An unsupervised neuromorphic clustering algorithm

Auteurs: Alan Diamond, Michael Schmuker, Thomas Nowotny
Publié dans: Biological Cybernetics, Numéro 113/4, 2019, Page(s) 423-437, ISSN 0340-1200
Éditeur: Springer Verlag
DOI: 10.1007/s00422-019-00797-7

Combined Rehabilitation Promotes the Recovery of Structural and Functional Features of Healthy Neuronal Networks after Stroke

Auteurs: Anna Letizia Allegra Mascaro, Emilia Conti, Stefano Lai, Antonino Paolo Di Giovanna, Cristina Spalletti, Claudia Alia, Alessandro Panarese, Alessandro Scaglione, Leonardo Sacconi, Silvestro Micera, Matteo Caleo, Francesco Saverio Pavone
Publié dans: Cell Reports, Numéro 28/13, 2019, Page(s) 3474-3485.e6, ISSN 2211-1247
Éditeur: Cell Press
DOI: 10.1016/j.celrep.2019.08.062

Caching mechanisms for habit formation in Active Inference

Auteurs: D. Maisto, K. Friston, G. Pezzulo
Publié dans: Neurocomputing, Numéro 359, 2019, Page(s) 298-314, ISSN 0925-2312
Éditeur: Elsevier BV
DOI: 10.1016/j.neucom.2019.05.083

Evaluation of Spike Sorting Algorithms: Application to Human Subthalamic Nucleus Recordings and Simulations

Auteurs: Jeyathevy Sukiban, Nicole Voges, Till A. Dembek, Robin Pauli, Veerle Visser-Vandewalle, Michael Denker, Immo Weber, Lars Timmermann, Sonja Grün
Publié dans: Neuroscience, Numéro 414, 2019, Page(s) 168-185, ISSN 0306-4522
Éditeur: Elsevier BV
DOI: 10.1016/j.neuroscience.2019.07.005

Suppressive Traveling Waves Shape Representations of Illusory Motion in Primary Visual Cortex of Awake Primate

Auteurs: Sandrine Chemla, Alexandre Reynaud, Matteo di Volo, Yann Zerlaut, Laurent Perrinet, Alain Destexhe, Frédéric Chavane
Publié dans: The Journal of Neuroscience, Numéro 39/22, 2019, Page(s) 4282-4298, ISSN 0270-6474
Éditeur: Society for Neuroscience
DOI: 10.1523/jneurosci.2792-18.2019

Machine Learning Analysis of τRAMD Trajectories to Decipher Molecular Determinants of Drug-Target Residence Times

Auteurs: Daria B. Kokh, Tom Kaufmann, Bastian Kister, Rebecca C. Wade
Publié dans: Frontiers in Molecular Biosciences, Numéro 6, 2019, ISSN 2296-889X
Éditeur: Frontiers Media SA
DOI: 10.3389/fmolb.2019.00036

Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro

Auteurs: Daniele Linaro, Gabriel K. Ocker, Brent Doiron, Michele Giugliano
Publié dans: The Journal of Neuroscience, Numéro 39/39, 2019, Page(s) 7648-7663, ISSN 0270-6474
Éditeur: Society for Neuroscience
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Learning tractable Bayesian networks in the space of elimination orders

Auteurs: Marco Benjumeda, Concha Bielza, Pedro Larrañaga
Publié dans: Artificial Intelligence, Numéro 274, 2019, Page(s) 66-90, ISSN 0004-3702
Éditeur: Elsevier BV
DOI: 10.1016/j.artint.2018.11.007

Pathway-Specific Genetic Risk for Alzheimer’s Disease Differentiates Regional Patterns of Cortical Atrophy in Older Adults

Auteurs: Svenja Caspers, Melanie E Röckner, Christiane Jockwitz, Nora Bittner, Alexander Teumer, Stefan Herms, Per Hoffmann, Markus M Nöthen, Susanne Moebus, Katrin Amunts, Sven Cichon, Thomas W Mühleisen
Publié dans: Cerebral Cortex, 2019, ISSN 1047-3211
Éditeur: Oxford University Press
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A Self-Aware Epilepsy Monitoring System for Real-Time Epileptic Seizure Detection

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General Anesthesia: A Probe to Explore Consciousness

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CoreNEURON : An Optimized Compute Engine for the NEURON Simulator

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Complex Electroresponsive Dynamics in Olivocerebellar Neurons Represented With Extended-Generalized Leaky Integrate and Fire Models

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A Closed-Loop Toolchain for Neural Network Simulations of Learning Autonomous Agents

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Tracking the Time Course of Bayesian Inference With Event-Related Potentials:A Study Using the Central Cue Posner Paradigm

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Increased and Decreased Superficial White Matter Structural Connectivity in Schizophrenia and Bipolar Disorder

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Transmission time delays organize the brain network synchronization

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Responsible Data Governance of Neuroscience Big Data

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Resting-state functional connectivity and cortical thickness characterization of a patient with Charles Bonnet syndrome

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Stability of working memory in continuous attractor networks under the control of short-term plasticity

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Evaluating Approximations and Heuristic Measures of Integrated Information

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Single tDCS session of motor cortex in patients with disorders of consciousness: a pilot study

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Unique Features of Network Bursts Emerge From the Complex Interplay of Excitatory and Inhibitory Receptors in Rat Neocortical Networks

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A Derived Positional Mapping of Inhibitory Subtypes in the Somatosensory Cortex

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Measures of CNS-Autonomic Interaction and Responsiveness in Disorder of Consciousness

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Altered Neocortical Dynamics in a Mouse Model of Williams–Beuren Syndrome

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Single-Cell and Neuronal Network Alterations in an In Vitro Model of Fragile X Syndrome

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Frequency- and State-Dependent Network Effects of Electrical Stimulation Targeting the Ventral Tegmental Area in Macaques

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Current Principles of Motor Control, with Special Reference to Vertebrate Locomotion

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The Segmentation of Proto-Objects in the Monkey Primary Visual Cortex

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Multimodal mapping and analysis of the cyto- and receptorarchitecture of the human hippocampus

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Crowding reveals fundamental differences in local vs. global processing in humans and machines

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State-dependent mean-field formalism to model different activity states in conductance-based networks of spiking neurons

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The genetic architecture of the human cerebral cortex

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Unifying the essential concepts of biological networks: biological insights and philosophical foundations

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A mean-field approach to the dynamics of networks of complex neurons, from nonlinear Integrate-and-Fire to Hodgkin–Huxley models

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A new computational approach to estimate whole-brain effective connectivity from functional and structural MRI, applied to language development

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Action execution and action observation elicit mirror responses with the same temporal profile in human SII

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The evolutionary origin of visual and somatosensory representation in the vertebrate pallium

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Automatic labeling of cortical sulci using patch- or CNN-based segmentation techniques combined with bottom-up geometric constraints

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Event-Triggered Sensing for High-Quality and Low-Power Cardiovascular Monitoring Systems

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Muscarinic and Nicotinic Modulation of Neocortical Layer 6A Synaptic Microcircuits Is Cooperative and Cell-Specific

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Task-Independent Spiking Central Pattern Generator: A Learning-Based Approach

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Functional network reorganization in older adults: Graph-theoretical analyses of age, cognition and sex

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Consensus paper: Decoding the Contributions of the Cerebellum as a Time Machine. From Neurons to Clinical Applications

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A Directional-Linear Bayesian Network and Its Application for Clustering and Simulation of Neural Somas

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Resource-Aware Distributed Epilepsy Monitoring Using Self-Awareness From Edge to Cloud

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Slow-Wave Activity in the S1HL Cortex Is Contributed by Different Layer-Specific Field Potential Sources during Development

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The Contribution of AMPA and NMDA Receptors to Persistent Firing in the Dorsolateral Prefrontal Cortex in Working Memory

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A real-time marker of object-based attention in the human brain. A possible component of a “gate-keeping mechanism” performing late attentional selection in the Ventro-Lateral Prefrontal Cortex

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Towards a European health research and innovation cloud (HRIC)

Auteurs: F. M. Aarestrup, A. Albeyatti, W. J. Armitage, C. Auffray, L. Augello, R. Balling, N. Benhabiles, G. Bertolini, J. G. Bjaalie, M. Black, N. Blomberg, P. Bogaert, M. Bubak, B. Claerhout, L. Clarke, B. De Meulder, G. D’Errico, A. Di Meglio, N. Forgo, C. Gans-Combe, A. E. Gray, I. Gut, A. Gyllenberg, G. Hemmrich-Stanisak, L. Hjorth, Y. Ioannidis, S. Jarmalaite, A. Kel, F. Kherif, J. O. Korbel, C. L
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Hierarchical Data-Driven Analysis of Clinical Symptoms Among Patients With Parkinson's Disease

Auteurs: Tal Kozlovski, Alexis Mitelpunkt, Avner Thaler, Tanya Gurevich, Avi Orr-Urtreger, Mali Gana-Weisz, Netta Shachar, Tal Galili, Mira Marcus-Kalish, Susan Bressman, Karen Marder, Nir Giladi, Yoav Benjamini, Anat Mirelman
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Éditeur: Frontiers Research Foundation
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Practical recommendations to conduct a neuroimaging meta‐analysis for neuropsychiatric disorders

Auteurs: Masoud Tahmasian, Amir A. Sepehry, Fateme Samea, Tina Khodadadifar, Zahra Soltaninejad, Nooshin Javaheripour, Habibolah Khazaie, Mojtaba Zarei, Simon B. Eickhoff, Claudia R. Eickhoff
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Possible Implication of the CA2 Hippocampal Circuit in Social Cognition Deficits Observed in the Neuroligin 3 Knock-Out Mouse, a Non-Syndromic Animal Model of Autism

Auteurs: Brijesh Modi, Domenico Pimpinella, Antonio Pazienti, Paola Zacchi, Enrico Cherubini, Marilena Griguoli
Publié dans: Frontiers in Psychiatry, Numéro 10, 2019, ISSN 1664-0640
Éditeur: Frontiers Research Foundation
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Emotion as an emergent phenomenon of the neurocomputational energy regulation mechanism of a cognitive agent in a decision-making task

Auteurs: Murat Kirtay, Lorenzo Vannucci, Ugo Albanese, Cecilia Laschi, Erhan Oztop, Egidio Falotico
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Modeling the allosteric modulation on a G-Protein Coupled Receptor: the case of M2 muscarinic Acetylcholine Receptor in complex with LY211960

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Neurobiological Divergence of the Positive and Negative Schizophrenia Subtypes Identified on a New Factor Structure of Psychopathology Using Non-negative Factorization: An International Machine Learning Study

Auteurs: Ji Chen, Kaustubh R. Patil, Susanne Weis, Kang Sim, Thomas Nickl-Jockschat, Juan Zhou, André Aleman, Iris E. Sommer, Edith J. Liemburg, Felix Hoffstaedter, Ute Habel, Birgit Derntl, Xiaojin Liu, Jona M. Fischer, Lydia Kogler, Christina Regenbogen, Vaibhav A. Diwadkar, Jeffrey A. Stanley, Valentin Riedl, Renaud Jardri, Oliver Gruber, Aristeidis Sotiras, Christos Davatzikos, Simon B. Eickhoff, Agna
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Comparison between diffusion MRI tractography and histological tract-tracing of cortico-cortical structural connectivity in the ferret brain

Auteurs: Céline Delettre, Arnaud Messé, Leigh-Anne Dell, Ophélie Foubet, Katja Heuer, Benoit Larrat, Sebastien Meriaux, Jean-Francois Mangin, Isabel Reillo, Camino de Juan Romero, Victor Borrell, Roberto Toro, Claus C. Hilgetag
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STDP Forms Associations between Memory Traces in Networks of Spiking Neurons

Auteurs: Christoph Pokorny, Matias J Ison, Arjun Rao, Robert Legenstein, Christos Papadimitriou, Wolfgang Maass
Publié dans: Cerebral Cortex, Numéro 30/3, 2019, Page(s) 952-968, ISSN 1047-3211
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The Epileptor Model: A Systematic Mathematical Analysis Linked to the Dynamics of Seizures, Refractory Status Epilepticus, and Depolarization Block

Auteurs: Kenza El Houssaini, Christophe Bernard, Viktor K. Jirsa
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CEREBRUM: a fast and fully-volumetric Convolutional Encoder-decodeR for weakly-supervised sEgmentation of BRain strUctures from out-of-the-scanner MRI

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Beyond Bouma's window: How to explain global aspects of crowding?

Auteurs: Adrien Doerig, Alban Bornet, Ruth Rosenholtz, Gregory Francis, Aaron M. Clarke, Michael H. Herzog
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Area-Specific Synapse Structure in Branched Posterior Nucleus Axons Reveals a New Level of Complexity in Thalamocortical Networks

Auteurs: Javier Rodriguez-Moreno, Cesar Porrero, Astrid Rollenhagen, Mario Rubio-Teves, Diana Casas-Torremocha, Lidia Alonso-Nanclares, Rachida Yakoubi, Andrea Santuy, Angel Merchan-Pérez, Javier DeFelipe, Joachim H.R. Lübke, Francisco Clasca
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An integrative methodology based on protein-protein interaction networks for identification and functional annotation of disease-relevant genes applied to channelopathies

Auteurs: Milagros Marín, Francisco J. Esteban, Hilario Ramírez-Rodrigo, Eduardo Ros, María José Sáez-Lara
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Layer 6b Is Driven by Intracortical Long-Range Projection Neurons

Auteurs: Timothy A. Zolnik, Julia Ledderose, Maria Toumazou, Thorsten Trimbuch, Tess Oram, Christian Rosenmund, Britta J. Eickholt, Robert N.S. Sachdev, Matthew E. Larkum
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Sizing complex networks

Auteurs: Gorka Zamora-López, Romain Brasselet
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Diverse Neuron Properties and Complex Network Dynamics in the Cerebellar Cortical Inhibitory Circuit

Auteurs: Francesca Prestori, Lisa Mapelli, Egidio D’Angelo
Publié dans: Frontiers in Molecular Neuroscience, Numéro 12, 2019, ISSN 1662-5099
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A Cerebellar Internal Models Control Architecture for Online Sensorimotor Adaptation of a Humanoid Robot Acting in a Dynamic Environment

Auteurs: Marie Claire Capolei, Nils Axel Andersen, Henrik Hautop Lund, Egidio Falotico, Silvia Tolu
Publié dans: IEEE Robotics and Automation Letters, Numéro 5/1, 2020, Page(s) 80-87, ISSN 2377-3766
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Running Large-Scale Simulations on the Neurorobotics Platform to Understand Vision – The Case of Visual Crowding

Auteurs: Alban Bornet, Jacques Kaiser, Alexander Kroner, Egidio Falotico, Alessandro Ambrosano, Kepa Cantero, Michael H. Herzog, Gregory Francis
Publié dans: Frontiers in Neurorobotics, Numéro 13, 2019, ISSN 1662-5218
Éditeur: Frontiers Research Foundation
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VOR Adaptation on a Humanoid iCub Robot Using a Spiking Cerebellar Model

Auteurs: Francisco Naveros, Niceto R. Luque, Eduardo Ros, Angelo Arleo
Publié dans: IEEE Transactions on Cybernetics, 2019, Page(s) 1-14, ISSN 2168-2267
Éditeur: IEEE Advancing Technology for Humanity
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On Robot Compliance: A Cerebellar Control Approach

Auteurs: I. Abadía, F. Naveros, J. A. Garrido, E. Ros, and N. R. Luque
Publié dans: IEEE Transactions on Cybernetics, 2019, ISSN 2168-2275
Éditeur: IEEE Transactions on Cybernetics
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Cholinergic Switch between Two Types of Slow Waves in Cerebral Cortex

Auteurs: Trang-Anh E Nghiem, Núria Tort-Colet, Tomasz Górski, Ulisse Ferrari, Shayan Moghimyfiroozabad, Jennifer S Goldman, Bartosz Teleńczuk, Cristiano Capone, Thierry Bal, Matteo di Volo, Alain Destexhe
Publié dans: Cerebral Cortex, Numéro 30/6, 2020, Page(s) 3451-3466, ISSN 1047-3211
Éditeur: Oxford University Press
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Disrupted Calcium Signaling in Animal Models of Human Spinocerebellar Ataxia (SCA)

Auteurs: Francesca Prestori, Francesco Moccia, Egidio D’Angelo
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NeuroQuery, comprehensive meta-analysis of human brain mapping

Auteurs: Jérôme Dockès, Russell A Poldrack, Romain Primet, Hande Gözükan, Tal Yarkoni, Fabian Suchanek, Bertrand Thirion, Gaël Varoquaux
Publié dans: eLife, Numéro 9, 2020, ISSN 2050-084X
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Low entropy map of brain oscillatory activity identifies spatially localized events: A new method for automated epilepsy focus prediction

Auteurs: Manel Vila-Vidal, Carmen Pérez Enríquez, Alessandro Principe, Rodrigo Rocamora, Gustavo Deco, Adrià Tauste Campo
Publié dans: NeuroImage, Numéro 208, 2020, Page(s) 116410, ISSN 1053-8119
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Modeling brain dynamics after tumor resection using The Virtual Brain

Auteurs: Hannelore Aerts, Michael Schirner, Thijs Dhollander, Ben Jeurissen, Eric Achten, Dirk Van Roost, Petra Ritter, Daniele Marinazzo
Publié dans: NeuroImage, Numéro 213, 2020, Page(s) 116738, ISSN 1053-8119
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A Biomimetic Control Method Increases the Adaptability of a Humanoid Robot Acting in a Dynamic Environment

Auteurs: Marie Claire Capolei, Emmanouil Angelidis, Egidio Falotico, Henrik Hautop Lund, Silvia Tolu
Publié dans: Frontiers in Neurorobotics, Numéro 13, 2019, ISSN 1662-5218
Éditeur: Frontiers Research Foundation
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Individual structural features constrain the mouse functional connectome

Auteurs: Francesca Melozzi, Eyal Bergmann, Julie A. Harris, Itamar Kahn, Viktor Jirsa, Christophe Bernard
Publié dans: Proceedings of the National Academy of Sciences, Numéro 116/52, 2019, Page(s) 26961-26969, ISSN 0027-8424
Éditeur: National Academy of Sciences
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Large-Scale Neuromorphic Spiking Array Processors: A Quest to Mimic the Brain

Auteurs: Chetan Singh Thakur, Jamal Lottier Molin, Gert Cauwenberghs, Giacomo Indiveri, Kundan Kumar, Ning Qiao, Johannes Schemmel, Runchun Wang, Elisabetta Chicca, Jennifer Olson Hasler, Jae-sun Seo, Shimeng Yu, Yu Cao, André van Schaik, Ralph Etienne-Cummings
Publié dans: Frontiers in Neuroscience, Numéro 12, 2018, ISSN 1662-453X
Éditeur: Frontiers Media SA
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Studying the effects of synaptic clustering in silico : when the neighbourhood party gets too loud

Auteurs: Szabolcs Káli
Publié dans: The Journal of Physiology, Numéro 596/17, 2018, Page(s) 3829-3830, ISSN 0022-3751
Éditeur: Blackwell Publishing Inc.
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Cytoarchitectonic Characterization and Functional Decoding of Four New Areas in the Human Lateral Orbitofrontal Cortex

Auteurs: Magdalena Wojtasik, Sebastian Bludau, Simon B. Eickhoff, Hartmut Mohlberg, Fatma Gerboga, Svenja Caspers, Katrin Amunts
Publié dans: Frontiers in Neuroanatomy, Numéro 14, 2020, ISSN 1662-5129
Éditeur: Frontiers Research Foundation
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Understanding Ligand Binding Selectivity in a Prototypical GPCR Family

Auteurs: Giulio Mattedi, Francesca Deflorian, Jonathan S. Mason, Chris de Graaf, Francesco L. Gervasio
Publié dans: Journal of Chemical Information and Modeling, Numéro 59/6, 2019, Page(s) 2830-2836, ISSN 1549-9596
Éditeur: American Chemical Society
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Unsuspected Involvement of Spinal Cord in Alzheimer Disease

Auteurs: Roberta Maria Lorenzi, Fulvia Palesi, Gloria Castellazzi, Paolo Vitali, Nicoletta Anzalone, Sara Bernini, Matteo Cotta Ramusino, Elena Sinforiani, Giuseppe Micieli, Alfredo Costa, Egidio D’Angelo, Claudia A. M. Gandini Wheeler-Kingshott
Publié dans: Frontiers in Cellular Neuroscience, Numéro 14, 2020, ISSN 1662-5102
Éditeur: Frontiers Research Foundation
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Embodied Synaptic Plasticity With Online Reinforcement Learning

Auteurs: Jacques Kaiser, Michael Hoff, Andreas Konle, J. Camilo Vasquez Tieck, David Kappel, Daniel Reichard, Anand Subramoney, Robert Legenstein, Arne Roennau, Wolfgang Maass, Rüdiger Dillmann
Publié dans: Frontiers in Neurorobotics, Numéro 13, 2019, ISSN 1662-5218
Éditeur: Frontiers Research Foundation
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Analysis and Model of Cortical Slow Waves Acquired with Optical Techniques

Auteurs: Marco Celotto, Chiara De Luca, Paolo Muratore, Francesco Resta, Anna Letizia Allegra Mascaro, Francesco Saverio Pavone, Giulia De Bonis, Pier Stanislao Paolucci
Publié dans: Methods and Protocols, Numéro 3/1, 2020, Page(s) 14, ISSN 2409-9279
Éditeur: MDPI AG
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Stochasticity from function — Why the Bayesian brain may need no noise

Auteurs: Dominik Dold, Ilja Bytschok, Akos F. Kungl, Andreas Baumbach, Oliver Breitwieser, Walter Senn, Johannes Schemmel, Karlheinz Meier, Mihai A. Petrovici
Publié dans: Neural Networks, Numéro 119, 2019, Page(s) 200-213, ISSN 0893-6080
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Combining Evolutionary and Adaptive Control Strategies for Quadruped Robotic Locomotion

Auteurs: Elisa Massi, Lorenzo Vannucci, Ugo Albanese, Marie Claire Capolei, Alexander Vandesompele, Gabriel Urbain, Angelo Maria Sabatini, Joni Dambre, Cecilia Laschi, Silvia Tolu, Egidio Falotico
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A Digital Hardware System for Spiking Network of Tactile Afferents

Auteurs: Nima Salimi-Nezhad, Erfan Ilbeigi, Mahmood Amiri, Egidio Falotico, Cecilia Laschi
Publié dans: Frontiers in Neuroscience, Numéro 13, 2020, ISSN 1662-453X
Éditeur: Frontiers Media SA
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QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain

Auteurs: Sharon C. Yates, Nicolaas E. Groeneboom, Christopher Coello, Stefan F. Lichtenthaler, Peer-Hendrik Kuhn, Hans-Ulrich Demuth, Maike Hartlage-Rübsamen, Steffen Roßner, Trygve Leergaard, Anna Kreshuk, Maja A. Puchades, Jan G. Bjaalie
Publié dans: Frontiers in Neuroinformatics, Numéro 13, 2019, ISSN 1662-5196
Éditeur: Frontiers Research Foundation
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Logical negation mapped onto the brain

Auteurs: Yosef Grodzinsky, Isabelle Deschamps, Peter Pieperhoff, Francesca Iannilli, Galit Agmon, Yonatan Loewenstein, Katrin Amunts
Publié dans: Brain Structure and Function, Numéro 225/1, 2020, Page(s) 19-31, ISSN 1863-2653
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Odor Stimuli: Not Just Chemical Identity

Auteurs: Mario Pannunzi, Thomas Nowotny
Publié dans: Frontiers in Physiology, Numéro 10, 2019, ISSN 1664-042X
Éditeur: Frontiers Research Foundation
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Fast, Flexible Closed-Loop Feedback: Tracking Movement in “Real-Millisecond-Time”

Auteurs: Keisuke Sehara, Viktor Bahr, Ben Mitchinson, Martin J. Pearson, Matthew E. Larkum, Robert N. S. Sachdev
Publié dans: eneuro, Numéro 6/6, 2019, Page(s) ENEURO.0147-19.2019, ISSN 2373-2822
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Brian2GeNN: accelerating spiking neural network simulations with graphics hardware

Auteurs: Marcel Stimberg, Dan F. M. Goodman, Thomas Nowotny
Publié dans: Scientific Reports, Numéro 10/1, 2020, ISSN 2045-2322
Éditeur: Nature Publishing Group
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Accelerated Physical Emulation of Bayesian Inference in Spiking Neural Networks

Auteurs: Akos F. Kungl, Sebastian Schmitt, Johann Klähn, Paul Müller, Andreas Baumbach, Dominik Dold, Alexander Kugele, Eric Müller, Christoph Koke, Mitja Kleider, Christian Mauch, Oliver Breitwieser, Luziwei Leng, Nico Gürtler, Maurice Güttler, Dan Husmann, Kai Husmann, Andreas Hartel, Vitali Karasenko, Andreas Grübl, Johannes Schemmel, Karlheinz Meier, Mihai A. Petrovici
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Co-transmission of acetylcholine and GABA regulates hippocampal states

Auteurs: Virág T. Takács, Csaba Cserép, Dániel Schlingloff, Balázs Pósfai, András Szőnyi, Katalin E. Sos, Zsuzsanna Környei, Ádám Dénes, Attila I. Gulyás, Tamás F. Freund, Gábor Nyiri
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Synergy of Glutamatergic and Cholinergic Modulation Induces Plateau Potentials in Hippocampal OLM Interneurons

Auteurs: Nicholas Hagger-Vaughan, Johan F. Storm
Publié dans: Frontiers in Cellular Neuroscience, Numéro 13, 2019, ISSN 1662-5102
Éditeur: Frontiers Research Foundation
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Multimodal Memory Components and Their Long-Term Dynamics Identified in Cortical Layers II/III but Not Layer V

Auteurs: Dong Li, Guangyu Wang, Hong Xie, Yi Hu, Ji-Song Guan, Claus C. Hilgetag
Publié dans: Frontiers in Integrative Neuroscience, Numéro 13, 2019, ISSN 1662-5145
Éditeur: Frontiers Research Foundation
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An efficient analytical reduction of detailed nonlinear neuron models

Auteurs: Oren Amsalem, Guy Eyal, Noa Rogozinski, Michael Gevaert, Pramod Kumbhar, Felix Schürmann, Idan Segev
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Stochastic rounding and reduced-precision fixed-point arithmetic for solving neural ordinary differential equations

Auteurs: Michael Hopkins, Mantas Mikaitis, Dave R. Lester, Steve Furber
Publié dans: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Numéro 378/2166, 2020, Page(s) 20190052, ISSN 1364-503X
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Concurrent human TMS-EEG-fMRI enables monitoring of oscillatory brain state-dependent gating of cortico-subcortical network activity

Auteurs: Judith C. Peters, Joel Reithler, Tom A. de Graaf, Teresa Schuhmann, Rainer Goebel, Alexander T. Sack
Publié dans: Communications Biology, Numéro 3/1, 2020, ISSN 2399-3642
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Optically Induced Calcium-Dependent Gene Activation and Labeling of Active Neurons Using CaMPARI and Cal-Light

Auteurs: Christian Ebner, Julia Ledderose, Timothy A. Zolnik, Sina E. Dominiak, Paul Turko, Athanasia Papoutsi, Panayiota Poirazi, Britta J. Eickholt, Imre Vida, Matthew E. Larkum, Robert N. S. Sachdev
Publié dans: Frontiers in Synaptic Neuroscience, Numéro 11, 2019, ISSN 1663-3563
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Dual-beam confocal light-sheet microscopy via flexible acousto-optic deflector

Auteurs: Vladislav Gavryusev, Giuseppe Sancataldo, Pietro Ricci, Alberto Montalbano, Chiara Fornetto, Lapo Turrini, Annunziatina Laurino, Luca Pesce, Giuseppe de Vito, Natascia Tiso, Francesco Vanzi, Ludovico Silvestri, Francesco S. Pavone
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Interfering with a memory without erasing its trace

Auteurs: Gesa Lange, Mario Senden, Alexandra Radermacher, Peter De Weerd
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Whisking Asymmetry Signals Motor Preparation and the Behavioral State of Mice

Auteurs: Sina E. Dominiak, Mostafa A. Nashaat, Keisuke Sehara, Hatem Oraby, Matthew E. Larkum, Robert N.S. Sachdev
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Near-Death Experience as a Probe to Explore (Disconnected) Consciousness

Auteurs: Charlotte Martial, Héléna Cassol, Steven Laureys, Olivia Gosseries
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Indirect and direct training of spiking neural networks for end-to-end control of a lane-keeping vehicle

Auteurs: Zhenshan Bing, Claus Meschede, Guang Chen, Alois Knoll, Kai Huang
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One-shot learning and behavioral eligibility traces in sequential decision making

Auteurs: Marco P Lehmann, He A Xu, Vasiliki Liakoni, Michael H Herzog, Wulfram Gerstner, Kerstin Preuschoff
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The SONATA data format for efficient description of large-scale network models

Auteurs: Kael Dai, Juan Hernando, Yazan N. Billeh, Sergey L. Gratiy, Judit Planas, Andrew P. Davison, Salvador Dura-Bernal, Padraig Gleeson, Adrien Devresse, Benjamin K. Dichter, Michael Gevaert, James G. King, Werner A. H. Van Geit, Arseny V. Povolotsky, Eilif Muller, Jean-Denis Courcol, Anton Arkhipov
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Human Pregenual Anterior Cingulate Cortex: Structural, Functional, and Connectional Heterogeneity

Auteurs: Nicola Palomero-Gallagher, Felix Hoffstaedter, Hartmut Mohlberg, Simon B Eickhoff, Katrin Amunts, Karl Zilles
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Functional Connectivity Changes of Key Regions for Motor Initiation in Parkinson’s Disease

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Optimized Reaction Pair of the CysHis Tag and Ni(II)-NTA Probe for Highly Selective Chemical Labeling of Membrane Proteins

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The Amyloid Precursor Protein C-Terminal Domain Alters CA1 Neuron Firing, Modifying Hippocampus Oscillations and Impairing Spatial Memory Encoding

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Dimensional reduction in networks of non-Markovian spiking neurons: Equivalence of synaptic filtering and heterogeneous propagation delays

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Neurophenomenology of near-death experience memory in hypnotic recall: a within-subject EEG study

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Size, Shape, and Distribution of Multivesicular Bodies in the Juvenile Rat Somatosensory Cortex: A 3D Electron Microscopy Study

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Dissecting the Shared and Context-Dependent Pathways Mediated by the p140Cap Adaptor Protein in Cancer and in Neurons

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Flexible Multi-Beam Light-Sheet Fluorescence Microscope for Live Imaging Without Striping Artifacts

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Biologically Realistic Mean-Field Models of Conductance-Based Networks of Spiking Neurons with Adaptation

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Response Dynamics in an Olivocerebellar Spiking Neural Network With Non-linear Neuron Properties

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Functional MRI in Macaque Monkeys during Task Switching

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In Vivo Identification of Thick, Thin, and Pale Stripes of Macaque Area V2 Using Submillimeter Resolution (f)MRI at 3 T

Auteurs: Xiaolian Li, Qi Zhu, Thomas Janssens, John T Arsenault, Wim Vanduffel
Publié dans: Cerebral Cortex, Numéro 29/2, 2017, Page(s) 544-560, ISSN 1047-3211
Éditeur: Oxford University Press
DOI: 10.1093/cercor/bhx337

Neuromodulated Synaptic Plasticity on the SpiNNaker Neuromorphic System

Auteurs: Mantas Mikaitis, Garibaldi Pineda García, James C. Knight, Steve B. Furber
Publié dans: Frontiers in Neuroscience, Numéro 12, 2018, ISSN 1662-453X
Éditeur: Frontiers Media SA
DOI: 10.3389/fnins.2018.00105

A strategy for designing allosteric modulators of transcription factor dimerization

Auteurs: Sho Oasa, Vladana Vukojević, Rudolf Rigler, Igor F. Tsigelny, Jean-Pierre Changeux, Lars Terenius
Publié dans: Proceedings of the National Academy of Sciences, Numéro 117/5, 2020, Page(s) 2683-2686, ISSN 0027-8424
Éditeur: National Academy of Sciences
DOI: 10.1073/pnas.1915531117

Synapse-Centric Mapping of Cortical Models to the SpiNNaker Neuromorphic Architecture

Auteurs: James C. Knight, Steve B. Furber
Publié dans: Frontiers in Neuroscience, Numéro 10, 2016, ISSN 1662-453X
Éditeur: Frontiers
DOI: 10.3389/fnins.2016.00420

Order reduction for a signaling pathway model of neuronal synaptic plasticity

Auteurs: Mikko Lehtimäki, Lassi Paunonen, Seppo Pohjolainen, Marja-Leena Linne
Publié dans: IFAC-PapersOnLine, Numéro 50/1, 2017, Page(s) 7687-7692, ISSN 2405-8963
Éditeur: Elsevier BV
DOI: 10.1016/j.ifacol.2017.08.1143

Potentiation of cerebellar Purkinje cells facilitates whisker reflex adaptation through increased simple spike activity

Auteurs: Vincenzo Romano, Licia De Propris, Laurens WJ Bosman, Pascal Warnaar, Michiel M ten Brinke, Sander Lindeman, Chiheng Ju, Arthiha Velauthapillai, Jochen K Spanke, Emily Middendorp Guerra, Tycho M Hoogland, Mario Negrello, Egidio D'Angelo, Chris I De Zeeuw
Publié dans: eLife, Numéro 7, 2018, ISSN 2050-084X
Éditeur: eLife Sciences Publications
DOI: 10.7554/elife.38852

I See Your Effort: Force-Related BOLD Effects in an Extended Action Execution–Observation Network Involving the Cerebellum

Auteurs: Letizia Casiraghi, Adnan A S Alahmadi, Anita Monteverdi, Fulvia Palesi, Gloria Castellazzi, Giovanni Savini, Karl Friston, Claudia A M Gandini Wheeler-Kingshott, Egidio D’Angelo
Publié dans: Cerebral Cortex, Numéro 29/3, 2019, Page(s) 1351-1368, ISSN 1047-3211
Éditeur: Oxford University Press
DOI: 10.1093/cercor/bhy322

Beyond Research Ethics: Dialogues in Neuro-ICT Research

Auteurs: Bernd Carsten Stahl, Simisola Akintoye, B. Tyr Fothergill, Manuel Guerrero, Will Knight, Inga Ulnicane
Publié dans: Frontiers in Human Neuroscience, Numéro 13, 2019, ISSN 1662-5161
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fnhum.2019.00105

Association of a Schizophrenia-Risk Nonsynonymous Variant With Putamen Volume in Adolescents

Auteurs: Qiang Luo, Qiang Chen, Wenjia Wang, Sylvane Desrivières, Erin Burke Quinlan, Tianye Jia, Christine Macare, Gabriel H. Robert, Jing Cui, Mickaël Guedj, Lena Palaniyappan, Ferath Kherif, Tobias Banaschewski, Arun L. W. Bokde, Christian Büchel, Herta Flor, Vincent Frouin, Hugh Garavan, Penny Gowland, Andreas Heinz, Bernd Ittermann, Jean-Luc Martinot, Eric Artiges, Marie-Laure Paillère-Martinot, F
Publié dans: JAMA Psychiatry, Numéro 76/4, 2019, Page(s) 435, ISSN 2168-622X
Éditeur: American Medical Association
DOI: 10.1001/jamapsychiatry.2018.4126

Computational roles of plastic probabilistic synapses

Auteurs: Milton Llera-Montero, João Sacramento, Rui Ponte Costa
Publié dans: Current Opinion in Neurobiology, Numéro 54, 2019, Page(s) 90-97, ISSN 0959-4388
Éditeur: Elsevier BV
DOI: 10.1016/j.conb.2018.09.002

A Metric for Evaluating Neural Input Representation in Supervised Learning Networks

Auteurs: Richard R. Carrillo, Francisco Naveros, Eduardo Ros, Niceto R. Luque
Publié dans: Frontiers in Neuroscience, Numéro 12, 2018, ISSN 1662-453X
Éditeur: Frontiers Media SA
DOI: 10.3389/fnins.2018.00913

Two Cultures and Our Encyclopaedic Brain

Auteurs: Jean-Pierre Changeux
Publié dans: European Review, Numéro 27/1, 2019, Page(s) 54-65, ISSN 1062-7987
Éditeur: Cambridge University Press
DOI: 10.1017/s1062798718000534

Challenges and Perspectives of Quantitative Functional Sodium Imaging (fNaI)

Auteurs: Claudia A. M. Gandini Wheeler-Kingshott, Frank Riemer, Fulvia Palesi, Antonio Ricciardi, Gloria Castellazzi, Xavier Golay, Ferran Prados, Bhavana Solanky, Egidio U. D’Angelo
Publié dans: Frontiers in Neuroscience, Numéro 12, 2018, ISSN 1662-453X
Éditeur: Frontiers Media SA
DOI: 10.3389/fnins.2018.00810

Prominent Changes in Cerebro-Cerebellar Functional Connectivity During Continuous Cognitive Processing

Auteurs: Gloria Castellazzi, Stefania D. Bruno, Ahmed T. Toosy, Letizia Casiraghi, Fulvia Palesi, Giovanni Savini, Egidio D’Angelo, Claudia Angela Michela Gandini Wheeler-Kingshott
Publié dans: Frontiers in Cellular Neuroscience, Numéro 12, 2018, ISSN 1662-5102
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fncel.2018.00331

A Heartbeat Away From Consciousness: Heart Rate Variability Entropy Can Discriminate Disorders of Consciousness and Is Correlated With Resting-State fMRI Brain Connectivity of the Central Autonomic Network

Auteurs: Francesco Riganello, Stephen Karl Larroque, Mohamed Ali Bahri, Lizette Heine, Charlotte Martial, Manon Carrière, Vanessa Charland-Verville, Charlène Aubinet, Audrey Vanhaudenhuyse, Camille Chatelle, Steven Laureys, Carol Di Perri
Publié dans: Frontiers in Neurology, Numéro 9, 2018, ISSN 1664-2295
Éditeur: Frontiers Research Foundation
DOI: 10.3389/fneur.2018.00769

Differences in cytoarchitecture of Broca's region between human, ape and macaque brains

Auteurs: Nicola Palomero-Gallagher, Karl Zilles
Publié dans: Cortex, 2018, ISSN 0010-9452
Éditeur: Masson Publishing
DOI: 10.1016/j.cortex.2018.09.008

Expansion of the effective action around non-Gaussian theories

Auteurs: Tobias Kühn, Moritz Helias
Publié dans: Journal of Physics A: Mathematical and Theoretical, Numéro 51/37, 2018, Page(s) 375004, ISSN 1751-8113
Éditeur: Institute of Physics Publishing
DOI: 10.1088/1751-8121/aad52e

"Body –to-head transplant; a ""caputal"" crime? Examining the corpus of ethical and legal issues"

Auteurs: Zaev D. Suskin, James J. Giordano
Publié dans: Philosophy, Ethics, and Humanities in Medicine, Numéro 13/1, 2018, ISSN 1747-5341
Éditeur: BioMed Central
DOI: 10.1186/s13010-018-0063-2

Spiking neural networks for computer vision

Auteurs: Michael Hopkins, Garibaldi Pineda-García, Petruţ A. Bogdan, Steve B. Furber
Publié dans: Interface Focus, Numéro 8/4, 2018, Page(s) 20180007, ISSN 2042-8898
Éditeur: Royal Society Publishing
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Regional brain volumetry and brain function in severely brain-injured patients

Auteurs: Jitka Annen, Gianluca Frasso, Julia Sophia Crone, Lizette Heine, Carol Di Perri, Charlotte Martial, Helena Cassol, Athena Demertzi, Lionel Naccache, Steven Laureys
Publié dans: Annals of Neurology, Numéro 83/4, 2018, Page(s) 842-853, ISSN 0364-5134
Éditeur: John Wiley & Sons Inc.
DOI: 10.1002/ana.25214

Public Safety and National Security Implications of the Horsepox Study

Auteurs: Jennifer Snow, James Giordano
Publié dans: Health Security, Numéro 16/2, 2018, Page(s) 140-142, ISSN 2326-5094
Éditeur: None
DOI: 10.1089/hs.2018.0018

Multicontact Co-operativity in Spike-Timing–Dependent Structural Plasticity Stabilizes Networks

Auteurs: Moritz Deger, Alexander Seeholzer, Wulfram Gerstner
Publié dans: Cerebral Cortex, Numéro 28/4, 2017, Page(s) 1396-1415, ISSN 1047-3211
Éditeur: Oxford University Press
DOI: 10.1093/cercor/bhx339

Neuroethics: What It Is, Does, and Should Do

Auteurs: James Giordano, John R. Shook
Publié dans: Health Care Ethics USA | Spring 2018, 2018, ISSN 1072-5490
Éditeur: Saint Louis University

Sleep-like slow oscillations improve visual classification through synaptic homeostasis and memory association in a thalamo-cortical model

Auteurs: Cristiano Capone, Elena Pastorelli, Bruno Golosio, Pier Stanislao Paolucci
Publié dans: scientific reports, 2018, ISSN 2045-2322
Éditeur: Nature Publishing Group

Slow Waves Analysis Pipeline for extracting the Features of the Bi-Modality from the Cerebral Cortex of Anesthetized Mice

Auteurs: Giulia De Bonis, Miguel Dasilva, Antonio Pazienti, Maria Victoria Sanchez-Vives, Maurizio Mattia, Pier Stanislao Paolucci
Publié dans: not applicable, 2019, ISSN 2045-2322
Éditeur: Nature Publishing Group

International Brain Initiative: An Innovative Framework for Coordinated Global Brain Research Efforts

Auteurs: Amy Adams, Stephanie Albin, Katrin Amunts, Tasia Asakawa, Amy Bernard, Jan G. Bjaalie, Khaled Chakli, James O. Deshler, Yves De Koninck, Christoph J. Ebell, Gary Egan, Melina E. Hale, Michael Häusser, Sung-Jin Jeong, Judy Illes, Linda Lanyon, Pingping Li, Yan Li, Pierre Magistretti, Agnes McMahon, Caroline Montojo, Toshihisa Ohtsuka, Shigeo Okabe, Hideyuki Okano, Gang Pei, Alexandre Pouget, Jason
Publié dans: Neuron, Numéro 105/2, 2020, Page(s) 212-216, ISSN 0896-6273
Éditeur: Cell Press
DOI: 10.1016/j.neuron.2020.01.002

Cortical reactivations during sleep spindles following declarative learning

Auteurs: Aude Jegou, Manuel Schabus, Olivia Gosseries, Brigitte Dahmen, Geneviève Albouy, Martin Desseilles, Virginie Sterpenich, Christophe Phillips, Pierre Maquet, Christophe Grova, Thien Thanh Dang-Vu
Publié dans: NeuroImage, Numéro 195, 2019, Page(s) 104-112, ISSN 1053-8119
Éditeur: Academic Press
DOI: 10.1016/j.neuroimage.2019.03.051

Mind Reading and Writing: The Future of Neurotechnology

Auteurs: Pieter R. Roelfsema, Damiaan Denys, P. Christiaan Klink
Publié dans: Trends in Cognitive Sciences, Numéro 22/7, 2018, Page(s) 598-610, ISSN 1364-6613
Éditeur: Elsevier BV
DOI: 10.1016/j.tics.2018.04.001

Molecular mechanisms underlying striatal synaptic plasticity: relevance to chronic alcohol consumption and seeking

Auteurs: Kim T. Blackwell, Armando G. Salinas, Parul Tewatia, Brad English, Jeanette Hellgren Kotaleski, David M. Lovinger
Publié dans: European Journal of Neuroscience, Numéro 49/6, 2019, Page(s) 768-783, ISSN 0953-816X
Éditeur: Blackwell Publishing Inc.
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Internal Coordinate Normal Mode Analysis: A Strategy To Predict Protein Conformational Transitions

Auteurs: Elisa Frezza, Richard Lavery
Publié dans: The Journal of Physical Chemistry B, Numéro 123/6, 2019, Page(s) 1294-1301, ISSN 1520-6106
Éditeur: American Chemical Society
DOI: 10.1021/acs.jpcb.8b11913

New approaches for computing ligand–receptor binding kinetics

Auteurs: Neil J Bruce, Gaurav K Ganotra, Daria B Kokh, S Kashif Sadiq, Rebecca C Wade
Publié dans: Current Opinion in Structural Biology, Numéro 49, 2018, Page(s) 1-10, ISSN 0959-440X
Éditeur: Elsevier BV
DOI: 10.1016/j.sbi.2017.10.001

Neuroethics Questions to Guide Ethical Research in the International Brain Initiatives

Auteurs: Karen S. Rommelfanger, Sung-Jin Jeong, Arisa Ema, Tamami Fukushi, Kiyoto Kasai, Khara M. Ramos, Arleen Salles, Ilina Singh, Jordan Amadio, Guo-Qiang Bi, Paul Frederick Boshears, Adrian Carter, Anna Devor, Kenji Doya, Hermann Garden, Judy Illes, L. Syd M. Johnson, Lyric Jorgenson, Bang-Ook Jun, Inyoung Lee, Patricia Michie, Tsuyoshi Miyakawa, Eisuke Nakazawa, Osamu Sakura, Hagop Sarkissian, Laura
Publié dans: Neuron, Numéro 100/1, 2018, Page(s) 19-36, ISSN 0896-6273
Éditeur: Cell Press
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Neuroethical and Social Implications of Using Transcranial Electrical Stimulation to Augment Creative Cognition

Auteurs: Adam B. Weinberger, Robert A. Cortes, Adam E. Green, James Giordano
Publié dans: Creativity Research Journal, Numéro 30/3, 2018, Page(s) 249-255, ISSN 1040-0419
Éditeur: Lawrence Erlbaum Associates Inc.
DOI: 10.1080/10400419.2018.1488199

Biological Characteristics of Connection-Wise Resting-State Functional Connectivity Strength

Auteurs: Rory Pijnenburg, Lianne H Scholtens, Dante Mantini, Wim Vanduffel, Lisa Feldman Barrett, Martijn P van den Heuvel
Publié dans: Cerebral Cortex, Numéro 29/11, 2019, Page(s) 4646-4653, ISSN 1047-3211
Éditeur: Oxford University Press
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Whole-Brain Multimodal Neuroimaging Model Using Serotonin Receptor Maps Explains Non-linear Functional Effects of LSD

Auteurs: Gustavo Deco, Josephine Cruzat, Joana Cabral, Gitte M. Knudsen, Robin L. Carhart-Harris, Peter C. Whybrow, Nikos K. Logothetis, Morten L. Kringelbach
Publié dans: Current Biology, Numéro 28/19, 2018, Page(s) 3065-3074.e6, ISSN 0960-9822
Éditeur: Cell Press
DOI: 10.1016/j.cub.2018.07.083

An endogenous explanation of growth: direct-to-consumer stem cell therapies in PR China, India and the USA

Auteurs: Saheli Datta
Publié dans: Regenerative Medicine, Numéro 13/5, 2018, Page(s) 559-579, ISSN 1746-0751
Éditeur: Future Medicine Ltd.
DOI: 10.2217/rme-2017-0144

The high efficacy of muscarinic M4 receptor in D1 medium spiny neurons reverses striatal hyperdopaminergia

Auteurs: Anu G. Nair, Liliana R.V. Castro, Marianne El Khoury, Victor Gorgievski, Bruno Giros, Eleni T. Tzavara, Jeanette Hellgren-Kotaleski, Pierre Vincent
Publié dans: Neuropharmacology, Numéro 146, 2019, Page(s) 74-83, ISSN 0028-3908
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.neuropharm.2018.11.029

Dynamic Redistribution of Plasticity in a Cerebellar Spiking Neural Network Reproducing an Associative Learning Task Perturbed by TMS

Auteurs: Alberto Antonietti, Jessica Monaco, Egidio D'Angelo, Alessandra Pedrocchi, Claudia Casellato
Publié dans: International Journal of Neural Systems, Numéro 28/09, 2018, Page(s) 1850020, ISSN 0129-0657
Éditeur: World Scientific Publishing Co
DOI: 10.1142/s012906571850020x

28th Annual Computational Neuroscience Meeting: CNS*2019

Auteurs: Jugoslava Acimovic, Tiina Manninen, Heidi Teppola, Sacha van Albada, Markus Diesmann, Marja-Leena Linne
Publié dans: BMC Neuroscience, Numéro 20/S1, 2019, ISSN 1471-2202
Éditeur: BioMed Central
DOI: 10.1186/s12868-019-0538-0

Attractor competition enriches cortical dynamics during awakening from anesthesia

Auteurs: Núria Tort-Colet, Cristiano Capone, Maria V. Sanchez-Vives, Maurizio Mattia
Publié dans: BioRxiv, 2019, ISSN 0000-0000
Éditeur: Cold Spring Harbor Laboratory
DOI: 10.1101/517102

A new view of dorsal visual cortex in macaques revealed by submillimeter fMRI

Auteurs: Qi Zhu, Wim Vanduffel
Publié dans: bioRxiv, 2019, ISSN 0000-0000
Éditeur: Cold Spring Harbor Laboratory
DOI: 10.1101/283051

Conductance-based dendrites perform reliability-weighted opinion pooling

Auteurs: Jakob Jordan,João Sacramento, Mihai A. Petrovici, Walter Senn,
Publié dans: 2020
Éditeur: NICE conference proceedings, when ready

Coordinated hippocampal-entorhinal replay asstructural inference

Auteurs: Talfan Evans, Neil Burgess
Publié dans: NIPS Proceedings, 2019
Éditeur: Curran Associates, Inc.

Closed-loop experiments on the BrainScaleS-2 architecture

Auteurs: K. Schreiber, T. C. Wunderlich, C. Pehle, M. A. Petrovici, J. Schemmel, K. Meier
Publié dans: NICE '20: Proceedings of the Neuro-inspired Computational Elements Workshop, 2020
Éditeur: ACM

Natural gradient learning for spiking neurons

Auteurs: Elena Kreutzer, Mihai A. Petrovici, Walter Senn
Publié dans: Proceedings of the Neuro-inspired Computational Elements Workshop, 2020, Page(s) 1-3, ISBN 9781450377188
Éditeur: ACM
DOI: 10.1145/3381755.3381771

Benchmarking of Neuromorphic Hardware Systems

Auteurs: Christoph Ostrau, Christian Klarhorst, Michael Thies, Ulrich Rückert
Publié dans: Proceedings of the Neuro-inspired Computational Elements Workshop, 2020, Page(s) 1-4, ISBN 9781450377188
Éditeur: ACM
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Asynchronous interface FIFO design on FPGA for high-throughput NRZ synchronisation

Auteurs: Gengting Liu, James Garside, Steve Furber, Luis A. Plana, Dirk Koch
Publié dans: 2017 27th International Conference on Field Programmable Logic and Applications (FPL), 2017, Page(s) 1-8, ISBN 978-9-0903-0428-1
Éditeur: IEEE
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A fixed point exponential function accelerator for a neuromorphic many-core system

Auteurs: Johannes Partzsch, Sebastian Hoppner, Matthias Eberlein, Rene Schuffny, Christian Mayr, David R. Lester, Steve Furber
Publié dans: 2017 IEEE International Symposium on Circuits and Systems (ISCAS), 2017, Page(s) 1-4, ISBN 978-1-4673-6853-7
Éditeur: IEEE
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Profiling a Many-core Neuromorphic Platform

Auteurs: Indar Sugiarto, Luis A. Plana, Steve Temple, Basabdatta S. Bhattacharya, Steve B. Furber, Patrick Camilleri
Publié dans: 2017 IEEE 11th International Conference on Application of Information and Communication Technologies (AICT), 2017, Page(s) 1-6, ISBN 978-1-5386-0501-1
Éditeur: IEEE
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Real-Time Cortical Simulations: Energy and Interconnect Scaling on Distributed Systems

Auteurs: Francesco Simula, Elena Pastorelli, Pier Stanislao Paolucci, Michele Martinelli, Alessandro Lonardo, Andrea Biagioni, Cristiano Capone, Fabrizio Capuani, Paolo Cretaro, Giulia De Bonis, Francesca Lo Cicero, Luca Pontisso, Piero Vicini, Roberto Ammendola
Publié dans: 2019 27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP), 2019, Page(s) 283-290, ISBN 978-1-7281-1644-0
Éditeur: IEEE
DOI: 10.1109/empdp.2019.8671627

Arbor — A Morphologically-Detailed Neural Network Simulation Library for Contemporary High-Performance Computing Architectures

Auteurs: Nora Abi Akar, Ben Cumming, Vasileios Karakasis, Anne Kusters, Wouter Klijn, Alexander Peyser, Stuart Yates
Publié dans: 2019 27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP), 2019, Page(s) 274-282, ISBN 978-1-7281-1644-0
Éditeur: IEEE
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IO Challenges for Human Brain Atlasing Using Deep Learning Methods - An In-Depth Analysis

Auteurs: Lena Oden, Christian Schiffer, Hannah Spitzer, Timo Dickscheid, Dirk Pleiter
Publié dans: 2019 27th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP), 2019, Page(s) 291-298, ISBN 978-1-7281-1644-0
Éditeur: IEEE
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Exploring Vestibulo-Ocular Adaptation in a Closed-Loop Neuro-Robotic Experiment Using STDP. A Simulation Study

Auteurs: Francisco Naveros, Jesus A. Garrido, Angelo Arleo, Eduardo Ros, Niceto R. Luque
Publié dans: 2018 IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS), 2018, Page(s) 1-9, ISBN 978-1-5386-8094-0
Éditeur: IEEE
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DROM - Enabling Efficient and Effortless Malleability for Resource Managers

Auteurs: Marco D'Amico, Marta Garcia-Gasulla, Víctor López, Ana Jokanovic, Raül Sirvent, Julita Corbalan
Publié dans: Proceedings of the 47th International Conference on Parallel Processing Companion - ICPP '18, 2018, Page(s) 1-10, ISBN 9781-450365239
Éditeur: ACM Press
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Multi-Modal Motion Activation for Robot Control Using Spiking Neurons

Auteurs: J. Camilo Vasquez Tieck, Lea Steffen, Jacques Kaiser, Arne Roennau, Rudiger Dillmann
Publié dans: 2018 7th IEEE International Conference on Biomedical Robotics and Biomechatronics (Biorob), 2018, Page(s) 291-298, ISBN 978-1-5386-8183-1
Éditeur: IEEE
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MPI+OpenMP Tasking Scalability for the Simulation of the Human Brain - Human Brain Project

Auteurs: Pedro Valero-Lara, Raül Sirvent, Antonio J. Peña, Xavier Martorell, Jesús Labarta
Publié dans: Proceedings of the 25th European MPI Users' Group Meeting on - EuroMPI'18, 2018, Page(s) 1-8, ISBN 9781-450364928
Éditeur: ACM Press
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Learning to Reproduce Visually Similar Movements by Minimizing Event-Based Prediction Error

Auteurs: Jacques Kaiser, Svenja Melbaum, J. Camilo Vasquez Tieck, Arne Roennau, Martin V. Butz, Rudiger Dillmann
Publié dans: 2018 7th IEEE International Conference on Biomedical Robotics and Biomechatronics (Biorob), 2018, Page(s) 260-267, ISBN 978-1-5386-8183-1
Éditeur: IEEE
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Efficient Fault Tolerance Through Dynamic Node Replacement

Auteurs: Suraj Prabhakaran, Marcel Neumann, Felix Wolf
Publié dans: 2018 18th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID), 2018, Page(s) 163-172, ISBN 978-1-5386-5815-4
Éditeur: IEEE
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Controlling a Robot Arm for Target Reaching without Planning Using Spiking Neurons

Auteurs: J. Camilo Vasquez Tieck, Lea Steffen, Jacques Kaiser, Arne Roennau, Rudiger Dillmann
Publié dans: 2018 IEEE 17th International Conference on Cognitive Informatics & Cognitive Computing (ICCI*CC), 2018, Page(s) 111-116, ISBN 978-1-5386-3360-1
Éditeur: IEEE
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Network-on-chip evaluation for a novel neural architecture

Auteurs: Markos Kynigos, Javier Navaridas, Luis A. Plana, Steve Furber
Publié dans: Proceedings of the 15th ACM International Conference on Computing Frontiers - CF '18, 2018, Page(s) 216-219, ISBN 9781-450357616
Éditeur: ACM Press
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Approximate Fixed-Point Elementary Function Accelerator for the SpiNNaker-2 Neuromorphic Chip

Auteurs: Mantas Mikaitis, David R Lester, Delong Shang, Steve Furber, Gengting Liu, Jim Garside, Stefan Scholze, Sebastian Hoppner, Andreas Dixius
Publié dans: 2018 IEEE 25th Symposium on Computer Arithmetic (ARITH), 2018, Page(s) 37-44, ISBN 978-1-5386-2613-9
Éditeur: IEEE
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Benchmarking and Characterization of event-based Neuromorphic Hardware

Auteurs: Christoph Ostrau, Christian Klarhorst, Michael Thies, Ulrich Rückert
Publié dans: FastPath 2019 - Sixth International Workshop on Performance Analysis of Machine Learning Systems, 2019
Éditeur: IBM Research

Tailoring SVM Inference for Resource-Efficient ECG-Based Epilepsy Monitors

Auteurs: Lorenzo Ferretti, Giovanni Ansaloni, Laura Pozzi, Amir Aminifar, David Atienza, Leila Cammoun, Philippe Ryvlin
Publié dans: 2019 Design, Automation & Test in Europe Conference & Exhibition (DATE), 2019, Page(s) 948-951, ISBN 978-3-9819263-2-3
Éditeur: IEEE
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A Self-Learning Methodology for Epileptic Seizure Detection with Minimally-Supervised Edge Labeling

Auteurs: Damian Pascual, Amir Aminifar, David Atienza
Publié dans: 2019 Design, Automation & Test in Europe Conference & Exhibition (DATE), 2019, Page(s) 764-769, ISBN 978-3-9819263-2-3
Éditeur: IEEE
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Integrating clinical data from hospital databases

Auteurs: Kostis Karozos, Iosif Spartalis, Artem Tsikiridis, Despoina Trivela, Vasilis Vassalos
Publié dans: http://ceur-ws.org, Numéro Vol-2164, 2018, ISSN 1613-0073
Éditeur: ceur-ws.org

Long short-term memory and learning-to-learn in networks of spiking neurons

Auteurs: Guillaume Bellec, Darjan Salaj, Anand Subramoney, Robert Legenstein, Wolfgang Maass
Publié dans: NIPS 2018, 2018
Éditeur: Curran Associates inc.

Work-in-Progress: Impact of Graph Partitioning on SNN Placement for a Multi-Core Neuromorphic Architecture

Auteurs: Francesco Barchi, Gianvito Urgese, Enrico Macii, Andrea Acquaviva
Publié dans: 2018 International Conference on Compilers, Architectures and Synthesis for Embedded Systems (CASES), 2018, Page(s) 1-2, ISBN 978-1-5386-5564-1
Éditeur: IEEE
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Work-in-Progress: Multiple Alignment of Packet Sequences for Efficient Communication in a Many-Core Neuromorphic System

Auteurs: Gianvito Urgese, Luca Peres, Francesco Barchi, Enrico Macii, Andrea Acquaviva
Publié dans: 2018 International Conference on Compilers, Architectures and Synthesis for Embedded Systems (CASES), 2018, Page(s) 1-2, ISBN 978-1-5386-5564-1
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Two Simple NeuroCognitive Associative Memory Models

Auteurs: Christian R. Huyck, Yuhue Ji
Publié dans: Proceedings of the 16th International Conference on Cognitive Modeling (ICCM 2018), 2018, Page(s) 31-36, ISBN 978-0-9985082-2-1
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Non-Linear Motor Control by Local Learning in Spiking Neural Networks

Auteurs: Aditya Gilra and Wulfram Gerstner
Publié dans: PMLR, 2018, ISSN 2640-3498
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Deep Rewiring: Training Very Sparse Deep Networks

Auteurs: Guillaume Bellec, David Kappel, Wolfgang Maass, Robert Legenstein
Publié dans: ICLR 2018, 2018
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Pattern recognition using latency coding in multilayer spiking neural networks

Auteurs: Brian Gardner, André Grüning
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Efficient Job Scheduling for Clusters with Shared Tiered Storage

Auteurs: Leah E. Lackner, Hamid Mohammadi Fard, Felix Wolf
Publié dans: 2019 19th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID), 2019, Page(s) 321-330, ISBN 978-1-7281-0912-1
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Meta-data management and quality control for the medical informatics platform

Auteurs: Admir Demiraj, Kostis Karozos, Iosif Spartalis, Vasilis Vassalos
Publié dans: Proceedings of the 23rd International Database Applications & Engineering Symposium on - IDEAS '19, 2019, Page(s) 1-9, ISBN 9781-450362498
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Deep reinforcement learning in a time-continuous model

Auteurs: Akos Ferenc Kungl, Dominik Dold, Oskar Riedler, Walter Senn, Mihai Alexandru Petrovici
Publié dans: 2019
Éditeur: Bernstein Conference 2019
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Holistic Slowdown Driven Scheduling and Resource Management for Malleable Jobs

Auteurs: Marco D'Amico, Ana Jokanovic, Julita Corbalan
Publié dans: Proceedings of the 48th International Conference on Parallel Processing - ICPP 2019, 2019, Page(s) 1-10, ISBN 9781-450362955
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Discovering Unexpected Local Nonlinear Interactions in Scientific Black-box Models

Auteurs: Michael Doron, Idan Segev, Dafna Shahaf
Publié dans: Proceedings of the 25th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining - KDD '19, 2019, Page(s) 425-435, ISBN 9781-450362016
Éditeur: ACM Press
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ViTa-SLAM: A Bio-inspired Visuo-Tactile SLAM for Navigation while Interacting with Aliased Environments

Auteurs: Oliver Struckmeier, Kshitij Tiwari, Mohammed Salman, Martin J. Pearson, Ville Kyrki
Publié dans: 2019
Éditeur: IEEE

ViTa-SLAM: Biologically-Inspired Visuo-Tactile SLAM

Auteurs: Oliver Struckmeier, Kshitij Tiwari, Martin J Pearson, Ville Kyrki
Publié dans: 2019
Éditeur: IEEE

Event-based computation: Unsupervised elementary motion decomposition.

Auteurs: Bogdan PA, Pineda-García G, Davidson S, Hopkins M, James R and Furber SB
Publié dans: 2019
Éditeur: EMiT/University of Huddersfield/High End Compute Ltd/University of Manchester

Accelerated simulation of a neuronal population via mathematical model order reduction

Auteurs: Mikko Lehtimäki, Ippa Seppälä, Lassi Paunonen, Marja-Leena Linne
Publié dans: 2020
Éditeur: IEEE Xplore

Co-Development of an Infant Prototype in Hardware and Simulation based on CT Imaging Data.

Auteurs: Feldotto, Benedikt; Walch, Blasius; Koch, Patrick; Dendorfer, Sebastian; Knoll, Alois
Publié dans: 2020
Éditeur: IEEE

Motion Prediction of Virtual Patterns, Human Hand Motions and a simplified Hand Manipulation Task with Hierarchical Temporal Memory

Auteurs: Tenbrink, Lukas; Feldotto, Benedikt; Röhrbein, Florian; Knoll, Alois
Publié dans: 2020
Éditeur: IEEE

Integration of Paired Spiking Cerebellar Models for Voluntary Movement Adaptation in a Closed-Loop Neuro-Robotic Experiment. A Simulation Study

Auteurs: Corchado, Carlos; Antonietti, Alberto; Capolei, Marie Claire; Casellato, Claudia; Tolu, Silvia
Publié dans: 2019
Éditeur: IEEE

Nonlinear scaling of resource allocation in sensory bottlenecks

Auteurs: Laura Rose Edmondson, Alejandro Jimenez-Rodriguez, Hannes P. Saal
Publié dans: 2019
Éditeur: NIPS Proceedings

Development of the neurorobotic mouse

Auteurs: P. Lucas, S. Oota, J. Conradt, and A. Knoll
Publié dans: 2019
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Auteurs: Talfan Evans, Neil Burgess
Publié dans: 2019
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Real-time cortical simulations: energy and interconnect scaling on distributed systems

ETAI 2018 International Conference : Proceedings of Abstracts. Skopje: Faculty of Electrical Engineering and Information Technology

Auteurs: STEPIŠNIK PERDIH, Tomaž, KOCEV, Dragi, DŽEROSKI, Sašo
Publié dans: 2018
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Directed Graph Placement for SNN Simulation into a multi-core GALS Architecture

Auteurs: Francesco Barchi, Gianvito Urgese, Andrea Acquaviva, Enrico Macii
Publié dans: 2018 IFIP/IEEE International Conference on Very Large Scale Integration (VLSI-SoC), 2018, Page(s) 19-24, ISBN 978-1-5386-4756-1
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Cerebellum-inspired approach for adaptive kinematic control of soft robots

Auteurs: Hari Teja Kalidindi, Thomas George Thuruthel, Cecilia Laschi, Egidio Falotico
Publié dans: 2019 2nd IEEE International Conference on Soft Robotics (RoboSoft), 2019, Page(s) 684-689, ISBN 978-1-5386-9260-8
Éditeur: IEEE
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Efficient Bundled Spatial Range Queries

Auteurs: Eleni Tzirita Zacharatou, Darius Šidlauskas, Farhan Tauheed, Thomas Heinis, Anastasia Ailamaki
Publié dans: Proceedings of the 27th ACM SIGSPATIAL International Conference on Advances in Geographic Information Systems, 2019, Page(s) 139-148, ISBN 9781-450369091
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Constraints on sequence processing speed in biological neuronal networks

Auteurs: Younes Bouhadjar, Markus Diesmann, Rainer Waser, Dirk J. Wouters, Tom Tetzlaff
Publié dans: Proceedings of the International Conference on Neuromorphic Systems, 2019, Page(s) 1-9, ISBN 9781-450376808
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Structured motor exploration for adaptive learning-based tracking in soft robotic manipulators

Auteurs: Yasmin Ansari, Cecilia Laschi, Egidio Falotico
Publié dans: 2019 2nd IEEE International Conference on Soft Robotics (RoboSoft), 2019, Page(s) 534-539, ISBN 978-1-5386-9260-8
Éditeur: IEEE
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The OTree: Multidimensional Indexing with efficient data Sampling for HPC

Auteurs: Cesare Cugnasco, Hadrien Calmet, Pol Santamaria, Raul Sirvent, Ane Beatriz Eguzkitza, Guillaume Houzeaux, Yolanda Becerra, Jordi Torres, Jesus Labarta
Publié dans: 2019 IEEE International Conference on Big Data (Big Data), 2019, Page(s) 433-440, ISBN 978-1-7281-0858-2
Éditeur: IEEE
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Projection-based order reduction of a nonlinear biophysical neuronal network model

Auteurs: Mikko Lehtimaki, Lassi Paunonen, Marja-Leena Linne
Publié dans: 2019 IEEE 58th Conference on Decision and Control (CDC), 2019, Page(s) 1-6, ISBN 978-1-7281-1398-2
Éditeur: IEEE
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Quantification of fiber orientation uncertainty in polarized light imaging of the human brain

Auteurs: Daniel Schmitz, Thomas Lippert, Katrin Amunts, Markus Axer
Publié dans: Medical Imaging 2020: Physics of Medical Imaging, 2020, Page(s) 117, ISBN 9781-510633926
Éditeur: SPIE
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Microsaccades for asynchronous feature extraction with spiking networks

Auteurs: Jacques Kaiser, Gerd Lindner, J. Camilo Vasquez Tieck, Martin Schulze, Michael Hoff, Arne Roennau, Rudiger Dillmann
Publié dans: 2018 Joint IEEE 8th International Conference on Development and Learning and Epigenetic Robotics (ICDL-EpiRob), 2018, Page(s) 139-146, ISBN 978-1-5386-6110-9
Éditeur: IEEE
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The Collaborative Virtual Reality Neurorobotics Lab

Auteurs: Carl Matthes, Tim Weissker, Emmanouil Angelidis, Alexander Kulik, Stephan Beck, Andre Kunert, Anton Frolov, Sandro Weber, Adrian Kreskowski, Bernd Froehlich
Publié dans: 2019 IEEE Conference on Virtual Reality and 3D User Interfaces (VR), 2019, Page(s) 1671-1674, ISBN 978-1-7281-1377-7
Éditeur: IEEE
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Rank Selection in Non-negative Matrix Factorization: systematic comparison and a new MAD metric

Auteurs: Laura Muzzarelli, Susanne Weis, Simon B. Eickhoff, Kaustubh R. Patil
Publié dans: 2019 International Joint Conference on Neural Networks (IJCNN), 2019, Page(s) 1-8, ISBN 978-1-7281-1985-4
Éditeur: IEEE
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Multi-Ray Jumping: Comprehensible Group Navigation for Collocated Users in Immersive Virtual Reality

Auteurs: Tim Weissker, Alexander Kulik, Bernd Froehlich
Publié dans: 2019 IEEE Conference on Virtual Reality and 3D User Interfaces (VR), 2019, Page(s) 136-144, ISBN 978-1-7281-1377-7
Éditeur: IEEE
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Obstacle Avoidance Using Stereo Vision and Deep Reinforcement Learning in an Animal-like Robot

Auteurs: Fuhai Ling, Alejandro Jimenez-Rodriguez, Tony J. Prescott
Publié dans: 2019 IEEE International Conference on Robotics and Biomimetics (ROBIO), 2019, Page(s) 71-76, ISBN 978-1-7281-6321-5
Éditeur: IEEE
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When is an action caused from within? Quantifying the causal chain leading to actions in simulated agents

Auteurs: Bjørn Erik Juel, Renzo Comolatti, Giulio Tononi, Larissa Albantakis
Publié dans: The 2019 Conference on Artificial Life, 2019, Page(s) 477-484, ISBN 978-0-262-35844-6
Éditeur: MIT Press
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A Graph Signal Processing Approach to Study High Density EEG Signals in Patients with Disorders of Consciousness

Auteurs: Sepehr Mortaheb, Jitka Annen, Camille Chatelle, Helena Cassol, Geraldine Martens, Aurore Thibaut, Olivia Gosseries, Steven Laureys
Publié dans: 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2019, Page(s) 4549-4553, ISBN 978-1-5386-1311-5
Éditeur: IEEE
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Gaussian and Exponential Lateral Connectivity on Distributed Spiking Neural Network Simulation

Auteurs: Elena Pastorelli, Pier Stanislao Paolucci, Francesco Simula, Andrea Biagioni, Fabrizio Capuani, Paolo Cretaro, Giulia De Bonis, Francesca Lo Cicero, Alessandro Lonardo, Michele Martinelli, Luca Pontisso, Piero Vicini, Roberto Ammendola
Publié dans: 2018 26th Euromicro International Conference on Parallel, Distributed and Network-based Processing (PDP), 2018, Page(s) 658-665, ISBN 978-1-5386-4975-6
Éditeur: IEEE
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Fast and deep neuromorphic learning with first-spike coding

Auteurs: J. Göltz, A. Baumbach, S. Billaudelle, A. F. Kungl, O. Breitwieser, K. Meier, J. Schemmel, L. Kriener, M. A. Petrovici
Publié dans: Proceedings of the Neuro-inspired Computational Elements Workshop, 2020, Page(s) 1-3, ISBN 9781450377188
Éditeur: ACM
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Closed-loop experiments on the BrainScaleS-2 architecture

Auteurs: K. Schreiber, T. C. Wunderlich, C. Pehle, M. A. Petrovici, J. Schemmel, K. Meier
Publié dans: Proceedings of the Neuro-inspired Computational Elements Workshop, 2020, Page(s) 1-3, ISBN 9781450377188
Éditeur: ACM
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An energy-based model of folded autoencoders for unsupervised learning in cortical hierarchies

Auteurs: Dominik Dold, João Sacramento, Akos F. Kungl, Walter Senn, Mihai A. Petrovici
Publié dans: 2019
Éditeur: Bernstein Conference 2019
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Mapping Deep Neural Networks on SpiNNaker2

Auteurs: Florian Kelber, Binyi Wu, Bernhard Vogginger, Johannes Partzsch, Chen Liu, Marco Stolba, Christian Mayr
Publié dans: Proceedings of the Neuro-inspired Computational Elements Workshop, 2020, Page(s) 1-3, ISBN 9781450377188
Éditeur: ACM
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Deep reinforcement learning for time-continuous substrates

Auteurs: Akos F. Kungl, Dominik Dold, Oskar Riedler, Mihai A. Petrovici, Walter Senn
Publié dans: 2020
Éditeur: N/A

Time- and Space-Efficient Spatial Data Analytics

Auteurs: Pavlovic, Mirjana
Publié dans: 2019
Éditeur: EPFL
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Contributions to Bayesian network classifiers and interneuron classification

Auteurs: Bojan Mihaljevic
Publié dans: 2018
Éditeur: Universidad Politécnica de Madrid
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Directional-linear Bayesian networks and applications in neuroscience

Auteurs: Ignacio Leguey Vitoriano
Publié dans: 2018
Éditeur: Universidad Politécnica de Madrid
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Efficient Query Processing for Spatial and Temporal Data Exploration

Auteurs: Tzirita Zacharatou, Eleni
Publié dans: 2019
Éditeur: EPFL
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The place-cell representation of a four-room maze with changeable connectivity

Auteurs: Anyi Liu
Publié dans: 2020
Éditeur: University College London

Exploring synaptic transmission and regulation in ionotropic receptors by molecular dynamics and computational electrophysiology

Auteurs: Adrien Cerdan
Publié dans: 2019
Éditeur: University of Strasbourg

Method development for co-simulation of electrical-chemical systems in Neuroscience

Auteurs: Ekaterina Brocke
Publié dans: 2020
Éditeur: KTH Royal Institute of Technology

Brain, consciousness and disorders of consciousness at the intersection of neuroscience and philosophy

Auteurs: Michele Farisco
Publié dans: 2019
Éditeur: Acta Universitatis Upsaliensis

Electrophysiological Markers of Consciousness: Measures of connectivity, complexity, and signal diversity in EEG for distinguishing between conscious and unconscious brain states

Auteurs: Bjørn Erik Juel
Publié dans: 2019
Éditeur: University of Oslo

PhD thesis: Device Variability in Synapses of Neuromorphic Circuits

Auteurs: Christoph Koke
Publié dans: 2018
Éditeur: N/A
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Timely and cost-efficient data exploration through adaptive tuning

Auteurs: Matthaios-Alexandros Olma
Publié dans: 2019
Éditeur: EPFL
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Computational Models of Astrocytes and Astrocyte–Neuron Interactions: Characterization, Reproducibility, and Future Perspectives

Auteurs: Tiina Manninen, Riikka Havela, Marja-Leena Linne
Publié dans: Computational Glioscience, 2019, Page(s) 423-454, ISBN 978-3-030-00815-4
Éditeur: Springer International Publishing
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A Brain-Inspired Cognitive System that Mimics the Dynamics of Human Thought

Auteurs: Yuehu Ji, David Gamez, Christian Huyck
Publié dans: Artificial Intelligence XXXV - 38th SGAI International Conference on Artificial Intelligence, AI 2018, Cambridge, UK, December 11–13, 2018, Proceedings, Numéro 11311, 2018, Page(s) 50-62, ISBN 978-3-030-04190-8
Éditeur: Springer International Publishing
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Extending Redescription Mining to Multiple Views

Auteurs: Matej Mihelčić, Sašo Džeroski, Tomislav Šmuc
Publié dans: Discovery Science - 21st International Conference, DS 2018, Limassol, Cyprus, October 29–31, 2018, Proceedings, Numéro 11198, 2018, Page(s) 292-307, ISBN 978-3-030-01770-5
Éditeur: Springer International Publishing
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Improving Cytoarchitectonic Segmentation of Human Brain Areas with Self-supervised Siamese Networks

Auteurs: Hannah Spitzer, Kai Kiwitz, Katrin Amunts, Stefan Harmeling, Timo Dickscheid
Publié dans: Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part III, Numéro 11072, 2018, Page(s) 663-671, ISBN 978-3-030-00930-4
Éditeur: Springer International Publishing
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Learning Continuous Muscle Control for a Multi-joint Arm by Extending Proximal Policy Optimization with a Liquid State Machine

Auteurs: Juan Camilo Vasquez Tieck, Marin Vlastelica Pogančić, Jacques Kaiser, Arne Roennau, Marc-Oliver Gewaltig, Rüdiger Dillmann
Publié dans: Artificial Neural Networks and Machine Learning – ICANN 2018 - 27th International Conference on Artificial Neural Networks, Rhodes, Greece, October 4-7, 2018, Proceedings, Part I, Numéro 11139, 2018, Page(s) 211-221, ISBN 978-3-030-01417-9
Éditeur: Springer International Publishing
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Microsaccades for Neuromorphic Stereo Vision

Auteurs: Jacques Kaiser, Jakob Weinland, Philip Keller, Lea Steffen, J. Camilo Vasquez Tieck, Daniel Reichard, Arne Roennau, Jörg Conradt, Rüdiger Dillmann
Publié dans: Artificial Neural Networks and Machine Learning – ICANN 2018 - 27th International Conference on Artificial Neural Networks, Rhodes, Greece, October 4-7, 2018, Proceedings, Part I, Numéro 11139, 2018, Page(s) 244-252, ISBN 978-3-030-01417-9
Éditeur: Springer International Publishing
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The Synthetic Psychology of the Self

Auteurs: Tony J. Prescott, Daniel Camilleri
Publié dans: Cognitive Architectures, Numéro 94, 2019, Page(s) 85-104, ISBN 978-3-319-97549-8
Éditeur: Springer International Publishing
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A Deep Predictive Coding Network for Inferring Hierarchical Causes Underlying Sensory Inputs

Auteurs: Shirin Dora, Cyriel Pennartz, Sander Bohte
Publié dans: Artificial Neural Networks and Machine Learning – ICANN 2018 - 27th International Conference on Artificial Neural Networks, Rhodes, Greece, October 4-7, 2018, Proceedings, Part III, Numéro 11141, 2018, Page(s) 457-467, ISBN 978-3-030-01423-0
Éditeur: Springer International Publishing
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Calibration Method to Improve Transfer from Simulation to Quadruped Robots

Auteurs: Gabriel Urbain, Alexander Vandesompele, Francis Wyffels, Joni Dambre
Publié dans: From Animals to Animats 15 - 15th International Conference on Simulation of Adaptive Behavior, SAB 2018, Frankfurt/Main, Germany, August 14-17, 2018, Proceedings, Numéro 10994, 2018, Page(s) 102-113, ISBN 978-3-319-97627-3
Éditeur: Springer International Publishing
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Understanding Interstate Competitiveness and International Security in European Dual-Use Research

Auteurs: Saheli Datta Burton, Christine Aicardi, Tara Mahfoud, Nikolas Rose
Publié dans: Biomimetic and Biohybrid Systems, Numéro 10928, 2018, Page(s) 129-133, ISBN 978-3-319-95971-9
Éditeur: Springer International Publishing
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Whisker-RatSLAM Applied to 6D Object Identification and Spatial Localisation

Auteurs: Mohammed Salman, Martin J. Pearson
Publié dans: Biomimetic and Biohybrid Systems, Numéro 10928, 2018, Page(s) 403-414, ISBN 978-3-319-95971-9
Éditeur: Springer International Publishing
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Unraveling Brain Modularity Through Slow Oscillations

Auteurs: Maurizio Mattia, Maria V. Sanchez-Vives
Publié dans: Nonlinear Dynamics in Computational Neuroscience, 2019, Page(s) 17-31, ISBN 978-3-319-71047-1
Éditeur: Springer International Publishing
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Streaming Live Neuronal Simulation Data into Visualization and Analysis

Auteurs: Simon Oehrl, Jan Müller, Jan Schnathmeier, Jochen Martin Eppler, Alexander Peyser, Hans Ekkehard Plesser, Benjamin Weyers, Bernd Hentschel, Torsten W. Kuhlen, Tom Vierjahn
Publié dans: High Performance Computing - ISC High Performance 2018 International Workshops, Frankfurt/Main, Germany, June 28, 2018, Revised Selected Papers, Numéro 11203, 2018, Page(s) 258-272, ISBN 978-3-030-02464-2
Éditeur: Springer International Publishing
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Local Optimal Transport for Functional Brain Template Estimation

Auteurs: T. Bazeille, H. Richard, H. Janati, B. Thirion
Publié dans: Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Hong Kong, China, June 2–7, 2019, Proceedings, Numéro 11492, 2019, Page(s) 237-248, ISBN 978-3-030-20350-4
Éditeur: Springer International Publishing
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Evaluating the Benefits of Key-Value Databases for Scientific Applications

Auteurs: Pol Santamaria, Lena Oden, Eloy Gil, Yolanda Becerra, Raül Sirvent, Philipp Glock, Jordi Torres
Publié dans: Computational Science – ICCS 2019 - 19th International Conference, Faro, Portugal, June 12–14, 2019, Proceedings, Part I, Numéro 11536, 2019, Page(s) 412-426, ISBN 978-3-030-22733-3
Éditeur: Springer International Publishing
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Brain-Inspired Hardware for Artificial Intelligence: Accelerated Learning in a Physical-Model Spiking Neural Network

Auteurs: Timo Wunderlich, Akos F. Kungl, Eric Müller, Johannes Schemmel, Mihai Petrovici
Publié dans: Artificial Neural Networks and Machine Learning – ICANN 2019: Theoretical Neural Computation - 28th International Conference on Artificial Neural Networks, Munich, Germany, September 17–19, 2019, Proceedings, Part I, Numéro 11727, 2019, Page(s) 119-122, ISBN 978-3-030-30486-7
Éditeur: Springer International Publishing
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Constraint Exploration of Convolutional Network Architectures with Neuroevolution

Auteurs: Jonas Dominik Homburg, Michael Adams, Michael Thies, Timo Korthals, Marc Hesse, Ulrich Rückert
Publié dans: Advances in Computational Intelligence - 15th International Work-Conference on Artificial Neural Networks, IWANN 2019, Gran Canaria, Spain, June 12-14, 2019, Proceedings, Part II, Numéro 11507, 2019, Page(s) 735-746, ISBN 978-3-030-20517-1
Éditeur: Springer International Publishing
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Closed Loop Control of a Compliant Quadruped with Spiking Neural Networks

Auteurs: Alexander Vandesompele, Gabriel Urbain, Francis Wyffels, Joni Dambre
Publié dans: Biologically Inspired Cognitive Architectures 2019 - Proceedings of the Tenth Annual Meeting of the BICA Society, Numéro 948, 2020, Page(s) 547-555, ISBN 978-3-030-25718-7
Éditeur: Springer International Publishing
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Efficient Construction of Geometric Nerve Fiber Models for Simulation with 3D-PLI

Auteurs: Jan A. Reuter, Felix Matuschke, Nicole Schubert, Markus Axer
Publié dans: Bildverarbeitung für die Medizin 2019 - Algorithmen – Systeme – Anwendungen. Proceedings des Workshops vom 17. bis 19. März 2019 in Lübeck, 2019, Page(s) 333-338, ISBN 978-3-658-25325-7
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Towards 3D Reconstruction of Neuronal Cell Distributions from Histological Human Brain Sections

Auteurs: Timo Dickscheid, Sarah Haas, Sebastian Bludau, Philipp Glock, Marcel Huysegoms, Katrin Amunts
Publié dans: 2019, ISBN 978-1-61499-998-0
Éditeur: IOS Press
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3D Polarized Light Imaging Portrayed: Visualization of Fiber Architecture Derived from 3D-PLI

Auteurs: Nicole Schubert, Markus Axer, Uwe Pietrzyk, Katrin Amunts
Publié dans: High-Resolution Neuroimaging - Basic Physical Principles and Clinical Applications, 2018, ISBN 978-953-51-3865-5
Éditeur: InTech
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Intelligence Science II - Third IFIP TC 12 International Conference, ICIS 2018, Beijing, China, November 2-5, 2018, Proceedings

Auteurs: Zhongzhi ShiCyriel PennartzTiejun Huang
Publié dans: Intelligence Science II,, 2018, ISBN 978-3-030-01313-4
Éditeur: Springer, Cham
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2nd HBP Student Conference- Transdisciplinary Research Linking Neuroscience, Brain Medicine and Computer Science - Book of Abstracts

Auteurs: A. Santuy, N. Simidjievski, M. Armendariz, P. Bogdan, C. Canova, C. Modenato, A. Mosinska
Publié dans: 2019
Éditeur: Frontiers Media SA
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Ethics in Innovation Management as Meta-Responsibility: The Practice of Responsible Research and Innovation in Human Brain Simulation

Auteurs: Bernd Carsten Stahl, Jos Timmermans, Stephen Rainey, Mark Shaw
Publié dans: 2019
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Éditeur: Now Publishers Inc.
DOI: 10.1561/9781680836530

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Éditeur: American Chemical Society (ACS)
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Auteurs: Zehl L, Zafarnia S, Köhnen S, Hilverling A, Andersson K, Legouée E, Hagen Blixhavn C, Aasebø IE, Puchades MA, Schlegel U, Kleven H, Schmid O, Gillespie T, Abrams MB, Davison A, Leergaard TB, Amunts K, Bjaalie JG, Dickscheid T
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Éditeur: Neuroinformatics 2019
DOI: 10.12751/incf.ni2019.0068

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Publié dans: 2019
Éditeur: ArXiv

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Publié dans: 2018
Éditeur: ArXiv

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Éditeur: ArXiv

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Publié dans: 2018
Éditeur: arxiv

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Biologically inspired alternatives to backpropagation through time for learning in recurrent neural nets

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Publié dans: 2019
Éditeur: arXIv Org

Reconciliation of weak pairwise spike-train correlations and highly co- herent local field potentials across space

Auteurs: Johanna Senk, Espen Hagen, Sacha J. van Albada, Markus Diesmann
Publié dans: 2018
Éditeur: na

A model for structured information representation in neural networks

Auteurs: Michael G. Müller, Christos H. Papadimitriou, Wolfgang Maass, Robert Legenstein
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Éditeur: na

Multi-area-model

Auteurs: Schmidt M.
Publié dans: 2018
Éditeur: Github

Neurorobotic Mouse (NeRmo) V4.1

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Éditeur: Technische Universität München
DOI: 10.14459/2020md1540519

Vorbild Natur. Wie Maschinen das Lernen lernen

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Publié dans: 2019
Éditeur: Forschungsmagazin Ruperto Carola
DOI: 10.17885/heiup.ruca.2019.15.24099

Optogenetic vision restoration with high resolution

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Publié dans: 2018
Éditeur: N/A
DOI: 10.1101/470773

Design of a Biomimetic Rodent Robot

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Publié dans: 2018
Éditeur: Technische Universität München, Institut für Informatik
DOI: 10.14459/2018md1464578

An efficient analytical reduction of nonlinear detailed neuron models

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Publié dans: BioRxiv, 2018
Éditeur: Cold Spring Harbor Laboratory
DOI: 10.1101/506485

Whole-neuron synaptic mapping reveals local balance between excitatory and inhibitory synapse organization

Auteurs: Daniel Maxim Iascone, Yujie Li, Uygar Sumbul, Michael Doron, Hanbo Chen, Valentine Andreu, Finola Goudy, Idan Segev, Hanchuan Peng, Franck Polleux
Publié dans: 2018
Éditeur: Cold Spring Harbor Laborator
DOI: 10.1101/395384

A mesoscopic layered cortical network model for spiking activity and local field potentials

Auteurs: Johanna Senk, Espen Hagen, Sacha J. van Albada, Markus Diesmann
Publié dans: 2018
Éditeur: N/A
DOI: 10.12751/nncn.bc2018.0163

Droits de propriété intellectuelle

A SENSORY INFORMATION COMPLIANT SPINAL CORD STIMULATION SYSTEM FOR THE REHABILITATION OF MOTOR FUNCTIONS

Numéro de demande/publication: EP 17826212
Date: 2017-12-19
Demandeur(s): ECOLE POLYTECHNIQUE FEDERALE DE LAUSANNE

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