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Plant Mobile RNAs: Function, Transport and Features

Deliverables

Publications

Methylated RNA Immunoprecipitation Assay to Study m<sup>5</sup>C Modification in Arabidopsis

Author(s): Eleftheria Saplaoura, Valentina Perrera, Friedrich Kragler
Published in: Journal of Visualized Experiments, Issue 159, 2020, ISSN 1940-087X
Publisher: MYJoVE Corporation
DOI: 10.3791/61231

Heritable transgene-free genome editing in plants by grafting of wild-type shoots to transgenic donor rootstocks

Author(s): Lei Yang, Frank Machin, Shuangfeng Wang, Eleftheria Saplaoura, Friedrich Kragler
Published in: Nature Biotechnology, Issue 12, 2023, ISSN 1087-0156
Publisher: Nature Publishing Group
DOI: 10.1038/s41587-022-01585-8

Arabidopsis callus grafts: a system to study symplasmic intercellular macromolecular transport and gene silencing spread

Author(s): Yağmur Hasbioğlu; Stephanie Weber; Friedrich Kragler; Frank Qasim Machin
Published in: The Plant Journal, 2023, ISSN 1365-313X
Publisher: Wiley
DOI: 10.1111/tpj.16326

m5C Methylation Guides Systemic Transport of Messenger RNA over Graft Junctions in Plants

Author(s): Lei Yang, Valentina Perrera, Eleftheria Saplaoura, Federico Apelt, Mathieu Bahin, Amira Kramdi, Justyna Olas, Bernd Mueller-Roeber, Ewelina Sokolowska, Wenna Zhang, Runsheng Li, Nicolas Pitzalis, Manfred Heinlein, Shoudong Zhang, Auguste Genovesio, Vincent Colot, Friedrich Kragler
Published in: Current Biology, Issue 29/15, 2019, Page(s) 2465-2476.e5, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1016/j.cub.2019.06.042

Validation of a novel associative transcriptomics pipeline in Brassica oleracea: Identifying candidates for vernalisation response

Author(s): Shannon Woodhouse; Zhesi He; Hugh C. Woolfenden; Burkhard Steuernagel; Wilfried Haerty; Ian Bancroft; Judith A. Irwin; Richard J. Morris; Rachel Wells
Published in: BMC Genomics, Issue 3, 2021, ISSN 1471-2164
Publisher: BioMed Central
DOI: 10.1186/s12864-021-07805-w

PyEscape: A narrow escape problem simulator package for Python

Author(s): Nathan Hughes, Richard Morris, Melissa Tomkins
Published in: Journal of Open Source Software, Issue 5/47, 2020, Page(s) 2072, ISSN 2475-9066
Publisher: JOSS
DOI: 10.21105/joss.02072

The Impact of Metabolic Scion-Rootstock Interactions in Different Grapevine Tissues and Phloem Exudates.

Author(s): Sara Tedesco; Alexander Erban; Saurabh Gupta; Joachim Kopka; Pedro Fevereiro; Friedrich Kragler; Ana Pina
Published in: Metabolites, Issue 18, 2022, ISSN 2218-1989
Publisher: MDPI
DOI: 10.3390/metabo11060349

Primary carbohydrate metabolism genes participate in heat-stress memory at the shoot apical meristem of Arabidopsis thaliana

Author(s): Justyna Jadwiga-Olas, Federico Apelt, Maria Grazia Annunziata, Sheeba John, Sarah Isabel Richard, Saurabh Gupta, Friedrich Kragler, Salma Balazadeh, Bernd Mueller-Roeber
Published in: Molecular Plants, Issue 14/9, 2021, ISSN 1674-2052
Publisher: Oxford University Press
DOI: 10.1016/j.molp.2021.05.024

Non-cell-autonomous HSC70.1 chaperone displays homeostatic feed-back regulation by binding its own mRNA.

Author(s): Lei Yang; Yuan Zhou; Shuangfeng Wang; Ying Xu; Steffen Ostendorp; Melissa Tomkins; Julia Kehr; Richard J. Morris; Friedrich Kragler
Published in: New Phytologist, Issue 15, 2022, ISSN 0028-646X
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/nph.18703

Shoot and root single cell sequencing reveals tissue- and daytime-specific transcriptome profiles

Author(s): Federico Apelt, Eleni Mavrothalassiti, Saurabh Gupta, Frank Machin, Justyna Jadwiga Olas, Maria Grazia Annunziata, Dana Schindelasch,Friedrich Kragler
Published in: Plant Physiology, Issue 188/2, 2022, Page(s) 861–878, ISSN 0032-0889
Publisher: American Society of Plant Biologists
DOI: 10.1093/plphys/kiab537

Structural and functional analysis of a plant nucleolar RNA chaperone-like protein

Author(s): Rita Fernandes; Anna Ostendorp; Steffen Ostendorp; Judith Mehrmann; Sven Falke; Melissa Ann Graewert; Magdalena Weingartner; Julia Kehr; Stefan Hoth
Published in: Scientific Reports, Issue 13, 2023, Page(s) 9656-, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-023-36426-4

Long-Distance Transported RNAs: From Identity to Function

Author(s): Julia Kehr, Richard J. Morris, Friedrich Kragler
Published in: Annual Review of Plant Biology, Issue 73, 2022, ISSN 1543-5008
Publisher: Annual Reviews, Inc.
DOI: 10.1146/annurev-arplant-070121-033601

Intrinsically disordered plant protein PARCL colocalizes with RNA in phase-separated condensates whose formation can be regulated by mutating the PLD

Author(s): Anna Ostendorp; Steffen Ostendorp; Yuan Zhou; Zoé Chaudron; Lukas Wolffram; Khadija Rombi; Linn von Pein; Sven Falke; Cy M. Jeffries; Dmitri I. Svergun; Christian Betzel; Richard J. Morris; Friedrich Kragler; Julia Kehr
Published in: The journal of biological chemistry, Issue 298, 2022, Page(s) 102631, ISSN 0021-9258
Publisher: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.3204/pubdb-2022-06899

Long-Distance Transported RNAs: From Identity to Function

Author(s): Julia Kehr Richard J. Morris Friedrich Kragler
Published in: Annual Reviews of Plant Biology, Issue 73, 2022, Page(s) 457-474, ISSN 1543-5008
Publisher: Annual Reviews, Inc.
DOI: 10.1146/annurev-arplant-070121-033601

An Arabidopsis Callus Grafting Method to Test Cell-to-Cell Mobility of Proteins

Author(s): Frank Machin, Yağmur Hasbioğlu, Friedrich Kragler
Published in: Plasmodesmata. Methods in Molecular Biology, Issue 2022, 2022, ISBN 978-1-0716-2131-8
Publisher: Humana
DOI: 10.1007/978-1-0716-2132-5_20

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