Next generation variety testing for improved cropping on European farmland

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Researcher focussed website established - M30

LESP will develop a researcherfocused website that will allow researchers to query modify and update variety data and information Month 30

Road map reports detailing how new methods could be applied to each selected crop type

This report will provide a road map on how new methods could be applied to the crop subset Collaboration with INVITE is anticipated in the task relating to this report

Publications

Analysis of the chromosomal clustering of Fusarium-responsive wheat genes uncovers new players in the defence against head blight disease

Auteurs: Alexandre Perochon, Harriet R. Benbow, Katarzyna Ślęczka-Brady, Keshav B. Malla, Fiona M. Doohan
Publié dans: Scientific Reports, Numéro 11/1, 2021, ISSN 2045-2322
Éditeur: Nature Publishing Group
DOI: 10.1038/s41598-021-86362-4

TrainSel: An R Package for Selection of Training Populations

Auteurs: Deniz Akdemir, Simon Rio, Julio Isidro y Sánchez
Publié dans: Frontiers in Genetics, Numéro 12, 2021, ISSN 1664-8021
Éditeur: Frontiers Media
DOI: 10.3389/fgene.2021.655287

Genotype by Environment Interaction Analysis of Agronomic Spring Barley Traits in Iceland Using AMMI, Factorial Regression Model and Linear Mixed Model

Auteurs: Hrannar Smári Hilmarsson, Simon Rio, Julio Isidro y Sánchez
Publié dans: Agronomy, Numéro 11/3, 2021, Page(s) 499, ISSN 2073-4395
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/agronomy11030499

Modelling Excess Zeros in Count Data: A New Perspective on Modelling Approaches

Auteurs: John Haslett; Andrew C. Parnell; John Hinde; Rafael de Andrade Moral
Publié dans: International Statistical Review, Numéro 2, 2021, ISSN 0306-7734
Éditeur: International Statistical Institute
DOI: 10.1111/insr.12479

Evaluation of the susceptibility of modern, wild, ancestral, and mutational wheat lines to Septoria tritici blotch disease

Auteurs: Sobia Ajaz, Harriet R. Benbow, Thalia Christodoulou, Cristobal Uauy, Fiona M. Doohan
Publié dans: Plant Pathology, Numéro 70/5, 2021, Page(s) 1123-1137, ISSN 0032-0862
Éditeur: Blackwell Publishing Inc.
DOI: 10.1111/ppa.13369

Comprehensive analysis of pathogen-responsive wheat NAC transcription factors: new candidates for crop improvement

Auteurs: Monika Vranic, Alexandre Perochon, Harriet Benbow, Fiona M Doohan
Publié dans: G3 Genes|Genomes|Genetics, 2022, ISSN 2160-1836
Éditeur: Genetics Society of America
DOI: 10.1093/g3journal/jkac247

Genomic prediction and training set optimization in a structured Mediterranean oat population.

Auteurs: Simon Rio; Luis M. Gallego-Sánchez; Gracia Montilla-Bascón; Francisco José Canales; Julio Isidro y Sánchez; Elena Prats
Publié dans: Theoretical and Applied Genetics volume, Numéro 134, 2021, ISSN 0040-5752
Éditeur: Springer Verlag
DOI: 10.1007/s00122-021-03916-w

Transcriptional Profiling Reveals the Wheat Defences against Fusarium Head Blight Disease Regulated by a NAC Transcription Factor

Auteurs: Monika Vranić; Alexandre Perochon; Fiona M. Doohan
Publié dans: Plants, Numéro 12, 2023, ISSN 2223-7747
Éditeur: MDPI
DOI: 10.3390/plants12142708

Training Set Optimization for Sparse Phenotyping in Genomic Selection: A Conceptual Overview

Auteurs: Julio Isidro y Sánchez, Deniz Akdemir
Publié dans: Frontiers in Plant Science, Numéro 12, 2021, ISSN 1664-462X
Éditeur: Frontiers Media S. A.
DOI: 10.3389/fpls.2021.715910

Assessment of genomic prediction reliability and optimization of experimental designs in multi-environment trials

Auteurs: Simon Rio; Deniz Akdemir; Tiago Carvalho; Julio Isidro y Sánchez
Publié dans: Theoretical and Applied Genetics, Numéro 2, 2022, ISSN 0040-5752
Éditeur: Springer Verlag
DOI: 10.1007/s00122-021-03972-2

Visualizing Variable Importance and Variable Interaction Effects in Machine Learning Models

Auteurs: Alan Inglis; Andrew C. Parnell; Catherine B. Hurley
Publié dans: Journal of Computational and Graphical Statistics, Numéro 2, 2021, ISSN 1061-8600
Éditeur: American Statistical Association
DOI: 10.48550/arxiv.2108.04310

Pollen Geochronology from the Atlantic Coast of the United States during the Last 500 Years

Auteurs: Margaret Christie, Christopher Bernhardt, Andrew Parnell, Timothy Shaw, Nicole Khan, D. Corbett, Ane García-Artola, Jennifer Clear, Jennifer Walker, Jeffrey Donnelly, Tobias Hasse, Benjamin Horton
Publié dans: Water, Numéro 13/3, 2021, Page(s) 362, ISSN 2073-4441
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/w13030362

Towards a Digital Twin of the Earth System: Geo-Soft-CoRe, a Geoscientific Software & Code Repository

Auteurs: Irene DeFelipe; Juan Alcalde; Eldar Baykiev; Isabel Bernal; Kittiphon Boonma; Ramon Carbonell; Stephanie Flude; Arnau Folch; Javier Fullea; Daniel García-Castellanos; Adelina Geyer; Santiago Giralt; Armand Hernández; Ivone Jiménez-Munt; Ajay Kumar; Maria-Gema Llorens; Joan Martí; Cecilia Molina; Andrés Olivar-Castaño; Andrew Parnell; Martin Schimmel; Montserrat Torné; Sergi Ventosa
Publié dans: Frontiers in Earth Science, Numéro 10, 2022, ISSN 2296-6463
Éditeur: Frontiers Media S.A.
DOI: 10.3389/feart.2022.828005

AFBI Science Impacts 2021: InnoVar: Next generation variety testing for improved cropping on European farmland

Auteurs: Gareth Burns, Lisa Black
Publié dans: AFBI Science Impacts, 2021
Éditeur: AFBI

How InterTradeIreland helped InnoVar secure H2020 funding

Auteurs: Lisa Black, Fiona Doohan, Elaine Groom, IntertradeIreland
Publié dans: 2020
Éditeur: Intertrade Ireland

InnoVar Kicks Off!

Auteurs: Lisa Black, Hazel Brown, Gerry Hoppe
Publié dans: 2019
Éditeur: AFBI

Tystoftes deltagelse i EU projektet InnoVar

Auteurs: Preben Klarskov Hansen
Publié dans: 2020
Éditeur: Tystoftefonden

Fænotypiske forskelle mellem sorter EU projektet InnoVar

Auteurs: Preben Klarskov Hansen
Publié dans: 2020
Éditeur: Tystofte

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