Deliverables
An initial demonstrator of the platform infrastructure will be delivered, for further development and optimisation throughout the project.
A comprehensive collection and analyses of curated data and molecular assays sourced from large-scale experiments and databases.
A handbook of the project management process, review process, quality checks, meeting organisation, which is communicated to all partners.
This deliverable constitutes the launch of the internal iPC communication infrastructure including the establishment of mailing lists, a subversion repository server and the iPC website.
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Publications
Author(s): Matteo Manica, Hyunjae Ryan Kim, Roland Mathis, Philippe Chouvarine, Dorothea Rutishauser, Laura De Vargas Roditi, Bence Szalai, Ulrich Wagner, Kathrin Oehl, Karim Saba, Arati Pati, Julio Saez-Rodriguez, Angshumoy Roy, Donald W. Parsons, Peter J. Wild, María Rodríguez Martínez, Pavel Sumazin
Published in: npj Systems Biology and Applications, Issue 6/1, 2020, ISSN 2056-7189
DOI: 10.1038/s41540-020-00147-5
Author(s): Juan Carrillo-Reixach, Laura Torrens, Marina Simon-Coma, Laura Royo, Montserrat Domingo-Sàbat, Jordi Abril-Fornaguera, Nicholas Akers, Margarita Sala, Sonia Ragull, Magdalena Arnal, Núria Villalmanzo, Stefano Cairo, Alberto Villanueva, Roland Kappler, Marta Garrido, Laura Guerra, Constantino Sábado, Gabriela Guillén, Mar Mallo, David Piñeyro, María Vázquez-Vitali, Olga Kuchuk, María Elena
Published in: Journal of Hepatology, Issue 73/2, 2020, Page(s) 328-341, ISSN 0168-8278
DOI: 10.1016/j.jhep.2020.03.025
Author(s): Joris Cadow, Jannis Born, Matteo Manica, Ali Oskooei, María Rodríguez Martínez
Published in: Nucleic Acids Research, Issue 48/W1, 2020, Page(s) W502-W508, ISSN 0305-1048
DOI: 10.1093/nar/gkaa327
Author(s): Jean-Marie Ravel, L. Cristobal Monraz Gomez, Nicolas Sompairac, Laurence Calzone, Boris Zhivotovsky, Guido Kroemer, Emmanuel Barillot, Andrei Zinovyev, Inna Kuperstein
Published in: Cancers, Issue 12/4, 2020, Page(s) 990, ISSN 2072-6694
DOI: 10.3390/cancers12040990
Author(s): Laura Cantini, Ulykbek Kairov, Aurélien de Reyniès, Emmanuel Barillot, François Radvanyi, Andrei Zinovyev
Published in: Bioinformatics, Issue 35/21, 2019, Page(s) 4307-4313, ISSN 1367-4803
DOI: 10.1093/bioinformatics/btz225
Author(s): Alexandra M. Stevens, Michael Xiang, Lisa N. Heppler, Isidora Tošić, Kevin Jiang, Jaime O. Munoz, Amos S. Gaikwad, Terzah M. Horton, Xin Long, Padmini Narayanan, Elizabeth L. Seashore, Maci C. Terrell, Raushan Rashid, Michael J. Krueger, Alicia E. Mangubat-Medina, Zachary T. Ball, Pavel Sumazin, Sarah R. Walker, Yoshimasa Hamada, Seiichi Oyadomari, Michele S. Redell, David A. Frank
Published in: Blood Advances, Issue 3/24, 2019, Page(s) 4215-4227, ISSN 2473-9529
DOI: 10.1182/bloodadvances.2019000499
Author(s): Filippo Castiglione, Dario Ghersi, Franco Celada
Published in: Frontiers in Immunology, Issue 10, 2019, ISSN 1664-3224
DOI: 10.3389/fimmu.2019.01513
Author(s): Matteo Manica, Ali Oskooei, Jannis Born, Vigneshwari Subramanian, Julio Sáez-Rodríguez, María Rodríguez Martínez
Published in: Molecular Pharmaceutics, Issue 16/12, 2019, Page(s) 4797-4806, ISSN 1543-8384
DOI: 10.1021/acs.molpharmaceut.9b00520
Author(s): Nicolas Sompairac, Petr V. Nazarov, Urszula Czerwinska, Laura Cantini, Anne Biton, Askhat Molkenov, Zhaxybay Zhumadilov, Emmanuel Barillot, Francois Radvanyi, Alexander Gorban, Ulykbek Kairov, Andrei Zinovyev
Published in: International Journal of Molecular Sciences, Issue 20/18, 2019, Page(s) 4414, ISSN 1422-0067
DOI: 10.3390/ijms20184414
Author(s): Marie-Ming Aynaud, Olivier Mirabeau, Nadege Gruel, Sandrine Grossetête, Valentina Boeva, Simon Durand, Didier Surdez, Olivier Saulnier, Sakina Zaïdi, Svetlana Gribkova, Aziz Fouché, Ulykbek Kairov, Virginie Raynal, Franck Tirode, Thomas G.P. Grünewald, Mylene Bohec, Sylvain Baulande, Isabelle Janoueix-Lerosey, Jean-Philippe Vert, Emmanuel Barillot, Olivier Delattre, Andrei Zinovyev
Published in: Cell Reports, Issue 30/6, 2020, Page(s) 1767-1779.e6, ISSN 2211-1247
DOI: 10.1016/j.celrep.2020.01.049
Author(s): Irina Balaur, Ludovic Roy, Alexander Mazein, S Gökberk Karaca, Ugur Dogrusoz, Emmanuel Barillot, Andrei Zinovyev
Published in: Bioinformatics, Issue 36/8, 2020, Page(s) 2620-2622, ISSN 1367-4803
DOI: 10.1093/bioinformatics/btz969
Author(s): Luca Albergante, Evgeny Mirkes, Jonathan Bac, Huidong Chen, Alexis Martin, Louis Faure, Emmanuel Barillot, Luca Pinello, Alexander Gorban, Andrei Zinovyev
Published in: Entropy, Issue 22/3, 2020, Page(s) 296, ISSN 1099-4300
DOI: 10.3390/e22030296
Author(s): Sergey E. Golovenkin, Jonathan Bac, Alexander Chervov, Evgeny M. Mirkes, Yuliya V. Orlova, Emmanuel Barillot, Alexander N. Gorban and Andrei Zinovyev
Published in: 2020
DOI: 10.5281/zenodo.4018714
Author(s): Lorenzi, Lucia; Chiu, Hua-Sheng; Cobos, Francisco Avila; Gross, Stephen; Volders, Pieter-Jan; Cannoodt, Robrecht; Nuytens, Justine; Vanderheyden, Katrien; Anckaert, Jasper; Lefever, Steve; Goovaerts, Tine; Birkballe Hansen, Thomas; Kuersten, Scott; Nijs, Nele; Taghon, Tom; Vermaelen, Karim; Bracke, Ken R.; Saeys, Yvan; De Meyer, Tim; Deshpande, Nandan; Anande, Govardhan; Chen, Ting-Wen; Wilkins, M
Published in: Issue 7, 2019
DOI: 10.1101/807529
Author(s): Stepec, D.; Skocaj, D.
Published in: Issue 1, 2020
DOI: 10.5281/zenodo.4288328
Author(s): Dominik Linzner
Michael Schmidt
Heinz Koeppl
Published in: 33rd Conference on Neural Information Processing Systems (NeurIPS 2019), 2019
Author(s): Dominik Linzner
Heinz Koeppl
Published in: Association for the Advancement of Artificial Intelligence, 2019
Author(s): Engelmann, Nikolai; Linzner, Dominik; Koeppl, Heinz
Published in: Issue 10, 2020
DOI: 10.5281/zenodo.3957199
Author(s): Jannis Born, Matteo Manica, Ali Oskooei, María Rodríguez Martínez
Published in: 2019
DOI: 10.5281/zenodo.3610233
Author(s): Dejan Štepec, Danijel Skočaj
Published in: 2020
DOI: 10.18690/978-961-286-337-1
Author(s): Petrizzelli, Marianyela; Merlevede, Jane; Zinovyev, Andrei
Published in: Issue 2, 2020
DOI: 10.5281/zenodo.3952244