European School of Network Neuroscience

Project Information

euSNN

Grant agreement ID: 860563

DOI

10.3030/860563

Project closed

EC signature date 4 September 2019

Start date 1 October 2019

End date 30 September 2024

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost

€ 3 966 875,64

EU contribution

€ 3 966 875,64

Coordinated by

UNIVERSITAETSKLINIKUM HAMBURG-EPPENDORF
Germany

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Documents, reports (3)

Web-based communication platform

Relates to Task 53

Core skills curriculum

Relates to Task 54

Open source network science curriculum and tutorial

Relates to Task 6.7.

Other (1)

euSNN web portal

Relates to Task 61

Publications

Peer reviewed articles (68)

A developmental increase of inhibition promotes the emergence of hippocampal ripples

Author(s): Irina Pochinok, Tristan M. Stöber, Jochen Triesch, Mattia Chini, Ileana L. Hanganu-Opatz
Published in: Nature Communications, Issue 15, 2024, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-44983-z

Strength-dependent perturbation of whole-brain model working in different regimes reveals the role of fluctuations in brain dynamics

Author(s): Yonatan Sanz Perl, Anira Escrichs, Enzo Tagliazucchi, Morten L. Kringelbach, Gustavo Deco
Published in: PLOS Computational Biology, Issue 18, 2023, Page(s) e1010662, ISSN 1553-7358
Publisher: PLoS
DOI: 10.1371/journal.pcbi.1010662

An increase of inhibition drives the developmental decorrelation of neural activity

Author(s): Mattia Chini, Thomas Pfeffer, Ileana Hanganu-Opatz
Published in: eLife, Issue 11, 2023, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/elife.78811

Dynamical models to evaluate structure–function relationships in network neuroscience

Author(s): Andrea I. Luppi, Joana Cabral, Rodrigo Cofre, Alain Destexhe, Gustavo Deco, Morten L. Kringelbach
Published in: Nature Reviews Neuroscience, Issue 23, 2022, Page(s) 767-768, ISSN 1471-003X
Publisher: Nature Publishing Group
DOI: 10.1038/s41583-022-00646-w

Cingulum and Uncinate Fasciculus Microstructural Abnormalities in Parkinson’s Disease: A Systematic Review of Diffusion Tensor Imaging Studies

Author(s): Fatemeh Rashidi, Mohammad Hossein Khanmirzaei, Farbod Hosseinzadeh, Zahra Kolahchi, Niloofar Jafarimehrabady, Bardia Moghisseh, Mohammad Hadi Aarabi
Published in: Biology, Issue 12, 2023, Page(s) 475, ISSN 2079-7737
Publisher: MDPI Open Access Journals
DOI: 10.3390/biology12030475

Calcium Imaging and Electrophysiology of hippocampal Activity under Anesthesia and natural Sleep in Mice

Author(s): Andrey Formozov, Mattia Chini, Alexander Dieter, Wei Yang, Jastyn A. Pöpplau, Ileana L. Hanganu-Opatz, J. Simon Wiegert
Published in: Scientific Data, Issue 9, 2022, ISSN 2052-4463
Publisher: Nature
DOI: 10.1038/s41597-022-01244-2

Edge-centric analysis of stroke patients: An alternative approach for biomarkers of lesion recovery

Author(s): Sebastian Idesis, Joshua Faskowitz, Richard F. Betzel, Maurizio Corbetta, Olaf Sporns, Gustavo Deco
Published in: NeuroImage: Clinical, Issue 35, 2024, Page(s) 103055, ISSN 2213-1582
Publisher: Elsevier BV
DOI: 10.1016/j.nicl.2022.103055

Role of homeostatic plasticity in critical brain dynamics following focal stroke lesions

Author(s): Rodrigo P. Rocha, Marco Zorzi, Maurizio Corbetta
Published in: Scientific Reports, Issue 14, 2024, Page(s) 31631, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-024-80196-6

Effects of classic psychedelic drugs on turbulent signatures in brain dynamics

Author(s): Josephine Cruzat, Yonatan Sanz Perl, Anira Escrichs, Jakub Vohryzek, Christopher Timmermann, Leor Roseman, Andrea I. Luppi, Agustin Ibañez, David Nutt, Robin Carhart-Harris, Enzo Tagliazucchi, Gustavo Deco, Morten L. Kringelbach
Published in: Network Neuroscience, Issue 6, 2022, Page(s) 1104-1124, ISSN 2472-1751
Publisher: MIT Press Direct
DOI: 10.1162/netn_a_00250

Smaller Cerebellar Lobule VIIb is Associated with Tremor Severity in Parkinson’s Disease

Author(s): Fatemeh Sadeghi, Monika Pötter-Nerger, Kai Grimm, Christian Gerloff, Robert Schulz, Simone Zittel
Published in: The Cerebellum, Issue 23, 2024, Page(s) 355-362, ISSN 1473-4230
Publisher: Springer Link
DOI: 10.1007/s12311-023-01532-6

Functional and structural lesion network mapping in neurological and psychiatric disorders: a systematic review

Author(s): Fardin Nabizadeh, Mohammad Hadi Aarabi
Published in: Frontiers in Neurology, Issue 14, 2023, ISSN 1664-2295
Publisher: Frontiers Research Foundation
DOI: 10.3389/fneur.2023.1100067

Dynamic sensitivity analysis: Defining personalised strategies to drive brain state transitions via whole brain modelling

Author(s): Jakub Vohryzek, Joana Cabral, Francesca Castaldo, Yonatan Sanz-Perl, Louis-David Lord, Henrique M. Fernandes, Vladimir Litvak, Morten L. Kringelbach, Gustavo Deco
Published in: Computational and Structural Biotechnology Journal, Issue 21, 2024, Page(s) 335-345, ISSN 2001-0370
Publisher: Elsevier
DOI: 10.1016/j.csbj.2022.11.060

White Matter Microstructure Associated with the Antidepressant Effects of Deep Brain Stimulation in Treatment-Resistant Depression: A Review of Diffusion Tensor Imaging Studies

Author(s): Giulia Cattarinussi, Hossein Sanjari Moghaddam, Mohammad Hadi Aarabi, Letizia Squarcina, Fabio Sambataro, Paolo Brambilla, Giuseppe Delvecchio
Published in: International Journal of Molecular Sciences, Issue 23, 2024, Page(s) 15379, ISSN 1422-0067
Publisher: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms232315379

Rare long-range cortical connections enhance human information processing

Author(s): Gustavo Deco, Yonathan Sanz Perl, Peter Vuust, Enzo Tagliazucchi, Henry Kennedy, Morten L. Kringelbach
Published in: Current Biology, Issue 31, 2023, Page(s) 4436-4448.e5, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1016/j.cub.2021.07.064

The relationship between frequency content and representational dynamics in the decoding of neurophysiological data

Author(s): Cameron Higgins, Mats W.J. van Es, Andrew J. Quinn, Diego Vidaurre, Mark W. Woolrich
Published in: NeuroImage, Issue 260, 2024, Page(s) 119462, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2022.119462

Interdisciplinary and Collaborative Training in Neuroscience: Insights from the Human Brain Project Education Programme

Author(s): Alice Geminiani, Judith Kathrein, Alper Yegenoglu, Franziska Vogel, Marcelo Armendariz, Ziv Ben-Zion, Petrut Antoniu Bogdan, Joana Covelo, Marissa Diaz Pier, Karin Grasenick, Vitali Karasenko, Wouter Klijn, Tina Kokan, Carmen Alina Lupascu, Anna Lührs, Tara Mahfoud, Taylan Özden, Jens Egholm Pedersen, Luca Peres, Ingrid Reiten, Nikola Simidjievski, Inga Ulnicane, Michiel van der Vlag, Lyuba Zehl
Published in: Neuroinformatics, Issue 22, 2024, Page(s) 657-678, ISSN 1559-0089
Publisher: Springer Nature
DOI: 10.1007/s12021-024-09682-6

Recording physiological and pathological cortical activity and exogenous electric fields using graphene microtransistor arrays <i>in vitro</i>

Author(s): Nathalia Cancino-Fuentes, Arnau Manasanch, Joana Covelo, Alex Suarez-Perez, Enrique Fernandez, Stratis Matsoukis, Christoph Guger, Xavi Illa, Anton Guimerà-Brunet, Maria V. Sanchez-Vives
Published in: Nanoscale, Issue 16, 2024, Page(s) 664-677, ISSN 2040-3364
Publisher: Royal Society of Chemistry
DOI: 10.1039/d3nr03842d

Chronic full-band recordings with graphene microtransistors as neural interfaces for discrimination of brain states

Author(s): A. Camassa, A. Barbero-Castillo, M. Bosch, M. Dasilva, E. Masvidal-Codina, R. Villa, A. Guimerà-Brunet, M. V. Sanchez-Vives
Published in: Nanoscale Horizons, Issue 9, 2024, Page(s) 589-597, ISSN 2055-6756
Publisher: Royal Society of Chemistry
DOI: 10.1039/d3nh00440f

Metastable oscillatory modes emerge from synchronization in the brain spacetime connectome

Author(s): Joana Cabral, Francesca Castaldo, Jakub Vohryzek, Vladimir Litvak, Christian Bick, Renaud Lambiotte, Karl Friston, Morten L. Kringelbach, Gustavo Deco
Published in: Communications Physics, Issue 5, 2023, ISSN 2399-3650
Publisher: Nature
DOI: 10.1038/s42005-022-00950-y

Olfactory bulb activity shapes the development of entorhinal-hippocampal coupling and associated cognitive abilities

Author(s): Yu-Nan Chen, Johanna K. Kostka, Sebastian H. Bitzenhofer, Ileana L. Hanganu-Opatz
Published in: Current Biology, Issue 33, 2024, Page(s) 4353-4366.e5, ISSN 0960-9822
Publisher: Cell Press
DOI: 10.1016/j.cub.2023.08.072

The human language effective connectome

Author(s): Edmund T. Rolls, Gustavo Deco, Chu-Chung Huang, Jianfeng Feng
Published in: NeuroImage, Issue 258, 2024, Page(s) 119352, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2022.119352

Multiscale Effects of Excitatory-Inhibitory Homeostasis in Lesioned Cortical Networks: A Computational Study

Author(s): Francisco Páscoa dos Santos, Jakub Vohryzek, Paul F.M.J. Verschure
Published in: PLoS Computational Biology, Issue 19(7):e1011279, 2024, ISSN 1553-7358
Publisher: PLoS
DOI: 10.1101/2022.11.23.517696

Functional hierarchies in brain dynamics characterized by signal reversibility in ferret cortex

Author(s): Sebastian Idesis, Sebastián Geli, Joshua Faskowitz, Jakub Vohryzek, Yonatan Sanz Perl, Florian Pieper, Edgar Galindo-Leon, Andreas K. Engel, Gustavo Deco
Published in: PLOS Computational Biology, Issue 20, 2024, Page(s) e1011818, ISSN 1553-7358
Publisher: PLoS
DOI: 10.1371/journal.pcbi.1011818

Developmental increase of inhibition drives decorrelation of neural activity

Author(s): Mattia Chini, Thomas Pfeffer, Ileana L. Hanganu-Opatz
Published in: eLife, Issue 11, 2022, Page(s) e78811, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.1101/2021.07.06.451299

Microstructural alterations of cerebellar peduncles in multiple sclerosis: a diffusion tensor imaging study

Author(s): Homa Seyedmirzaei, Alireza Soltani Khaboushan, Amirhussein Abdolalizadeh, Mohammad Hadi Aarabi
Published in: Acta Neurologica Belgica, 2024, ISSN 0300-9009
Publisher: Acta Medica Belgica
DOI: 10.1007/s13760-024-02675-x

Multi-modal and multi-model interrogation of large-scale functional brain networks

Author(s): Francesca Castaldo, Francisco Páscoa dos Santos, Ryan C Timms, Joana Cabral, Jakub Vohryzek, Gustavo Deco, Mark Woolrich, Karl Friston, Paul Verschure, Vladimir Litvak
Published in: NeuroImage, Issue 277:120236, 2024, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1101/2022.12.19.520967

Graph theoretical approach to brain remodeling in multiple sclerosis

Author(s): AmirHussein Abdolalizadeh, Mohammad Amin Dabbagh Ohadi, Amir Sasan Bayani Ershadi, Mohammad Hadi Aarabi
Published in: Network Neuroscience, Issue 7, 2023, Page(s) 148-159, ISSN 2472-1751
Publisher: MIT Press Direct
DOI: 10.1162/netn_a_00276

NeuroBus - Architecture for an Ultra-Flexible Neural Interface

Author(s): Markus Sporer, Ioana-Georgiana Vasilaş, Ahmed Adžemović, Nicolas Graber, Stefan Reich, Calogero Gueli, Max Eickenscheidt, Ilka Diester, Thomas Stieglitz, Maurits Ortmanns
Published in: IEEE Transactions on Biomedical Circuits and Systems, Issue 18, 2024, Page(s) 247-262, ISSN 1932-4545
Publisher: Institute of Electrical and Electronics Engineers
DOI: 10.1109/tbcas.2024.3354785

A low dimensional embedding of brain dynamics enhances diagnostic accuracy and behavioral prediction in stroke

Author(s): Sebastian Idesis, Michele Allegra, Jakub Vohryzek, Yonatan Sanz Perl, Joshua Faskowitz, Olaf Sporns, Maurizio Corbetta, Gustavo Deco
Published in: Scientific Reports, Issue 13, 2023, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-023-42533-z

Dissecting unsupervised learning through hidden Markov modelling in electrophysiological data

Author(s): Laura Masaracchia, Felipe Fredes, Mark W. Woolrich, Diego Vidaurre
Published in: Journal of Neurophysiology, Issue 20(2), 2024, Page(s) 364-379, ISSN 0022-3077
Publisher: American Physiological Society
DOI: 10.1101/2023.01.19.524547

The human posterior cingulate, retrosplenial, and medial parietal cortex effective connectome, and implications for memory and navigation

Author(s): Edmund T. Rolls, Sylvia Wirth, Gustavo Deco, Chu‐Chung Huang, Jianfeng Feng
Published in: Human Brain Mapping, Issue 44, 2023, Page(s) 629-655, ISSN 1065-9471
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/hbm.26089

Excitatory-Inhibitory Homeostasis and Diaschisis: Tying the Local and Global Scales in the Post-stroke Cortex

Author(s): Francisco Páscoa dos Santos, Paul F. M. J. Verschure
Published in: Frontiers in Systems Neuroscience, Issue 15, 2022, ISSN 1662-5137
Publisher: Frontiers Research Foundation
DOI: 10.3389/fnsys.2021.806544

Mapping Interictal activity in epilepsy using a hidden Markov model: A magnetoencephalography study

Author(s): Zelekha A. Seedat, Lukas Rier, Lauren E. Gascoyne, Harry Cook, Mark W. Woolrich, Andrew J. Quinn, Timothy P. L. Roberts, Paul L. Furlong, Caren Armstrong, Kelly St. Pier, Karen J. Mullinger, Eric D. Marsh, Matthew J. Brookes, William Gaetz
Published in: Human Brain Mapping, Issue 44, 2023, Page(s) 66-81, ISSN 1065-9471
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/hbm.26118

EMD: Empirical Mode Decomposition and Hilbert-Huang Spectral Analyses in Python

Author(s): Quinn AJ, Lopes-dos-Santos V, Dupret D, Nobre AC, Woolrich MW
Published in: Journal of Open Source Software, Issue 6(59), 2020, Page(s) 2977, ISSN 2475-9066
Publisher: Journal of Open Source Software
DOI: 10.21105/joss.02977

Assessing the coupling between local neural activity and global connectivity fluctuations: Application to human intracranial electroencephalography during a cognitive task

Author(s): Manel Vila‐Vidal, Mariam Khawaja, Mar Carreño, Pedro Roldán, Jordi Rumià, Antonio Donaire, Gustavo Deco, Adrià Tauste Campo
Published in: Human Brain Mapping, Issue 44, 2023, Page(s) 1173-1192, ISSN 1065-9471
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/hbm.26150

A ventromedial visual cortical ‘Where’ stream to the human hippocampus for spatial scenes revealed with magnetoencephalography

Author(s): Edmund T. Rolls, Xiaoqian Yan, Gustavo Deco, Yi Zhang, Veikko Jousmaki, Jianfeng Feng
Published in: Communications Biology, Issue 7, 2024, ISSN 2399-3642
Publisher: Nature Portfolio
DOI: 10.1038/s42003-024-06719-z

Disability and persistent motor deficits are linked to structural crossed cerebellar diaschisis in chronic stroke

Author(s): Stephanie Guder, Fatemeh Sadeghi, Simone Zittel, Fanny Quandt, Chi‐un Choe, Marlene Bönstrup, Bastian Cheng, Götz Thomalla, Christian Gerloff, Robert Schulz
Published in: Human Brain Mapping, Issue 44, 2023, Page(s) 5336-5345, ISSN 1065-9471
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/hbm.26434

Spontaneous Activity Patterns in Human Attention Networks Code for Hand Movements

Author(s): Lu Zhang, Lorenzo Pini, DoHyun Kim, Gordon L. Shulman, Maurizio Corbetta
Published in: The Journal of Neuroscience, Issue 43, 2023, Page(s) 1976-1986, ISSN 0270-6474
Publisher: Society for Neuroscience
DOI: 10.1523/jneurosci.1601-22.2023

Imaging the columnar functional organization of human area MT+ to axis-of-motion stimuli using VASO at 7 Tesla

Author(s): Alessandra Pizzuti, Laurentius (Renzo) Huber, Omer Faruk Gulban, Amaia Benitez-Andonegui, Judith Peters, Rainer Goebel
Published in: Cerebral Cortex, Issue 33, 2023, Page(s) 8693-8711, ISSN 1047-3211
Publisher: Oxford University Press
DOI: 10.1093/cercor/bhad151

Perturbations in dynamical models of whole-brain activity dissociate between the level and stability of consciousness

Author(s): Yonatan Sanz Perl, Carla Pallavicini, Ignacio Pérez Ipiña, Athena Demertzi, Vincent Bonhomme, Charlotte Martial, Rajanikant Panda, Jitka Annen, Agustín Ibañez, Morten Kringelbach, Gustavo Deco, Helmut Laufs, Jacobo Sitt, Steven Laureys, Enzo Tagliazucchi
Published in: PLoS Computational Biology, Issue 17(7):e1009139, 2024, ISSN 1553-7358
Publisher: PLoS
DOI: 10.1101/2020.07.02.185157

Optimizing the montage for cerebellar transcranial alternating current stimulation (tACS): a combined computational and experimental study

Author(s): Sadeghihassanabadi, F., Misselhorn, J., Gerloff, C., Zittel-Dirks, S
Published in: Journal of Neural Engineering, Issue 19(2), 2022, Page(s) 026060, ISSN 1741-2552
Publisher: IOP Publishing
DOI: 10.1088/1741-2552/ac676f

Unifying turbulent dynamics framework distinguishes different brain states

Author(s): Anira Escrichs, Yonatan Sanz Perl, Carme Uribe, Estela Camara, Basak Türker, Nadya Pyatigorskaya, Ane López-González, Carla Pallavicini, Rajanikant Panda, Jitka Annen, Olivia Gosseries, Steven Laureys, Lionel Naccache, Jacobo D. Sitt, Helmut Laufs, Enzo Tagliazucchi, Morten L. Kringelbach, Gustavo Deco
Published in: Communications Biology, Issue 5, 2023, ISSN 2399-3642
Publisher: Nature
DOI: 10.1038/s42003-022-03576-6

Patterns of gray and white matter functional networks involvement in glioblastoma patients: indirect mapping from clinical MRI scans

Author(s): Giulio Sansone, Lorenzo Pini, Alessandro Salvalaggio, Matteo Gaiola, Francesco Volpin, Valentina Baro, Marta Padovan, Mariagiulia Anglani, Silvia Facchini, Franco Chioffi, Vittorina Zagonel, Domenico D’Avella, Luca Denaro, Giuseppe Lombardi, Maurizio Corbetta
Published in: Frontiers in Neurology, Issue 14, 2023, ISSN 1664-2295
Publisher: Frontiers Research Foundation
DOI: 10.3389/fneur.2023.1175576

Webcam eye tracking close to laboratory standards: Comparing a new webcam-based system and the EyeLink 1000

Author(s): Tobiasz Kaduk, Caspar Goeke, Holger Finger, Peter König
Published in: Behavior Research Methods, Issue 56, 2024, Page(s) 5002-5022, ISSN 1554-3528
Publisher: Springer Nature
DOI: 10.3758/s13428-023-02237-8

The GLM-spectrum: A multilevel framework for spectrum analysis with covariate and confound modelling

Author(s): Andrew J. Quinn, Lauren Z. Atkinson, Chetan Gohil, Oliver Kohl, Jemma Pitt, Catharina Zich, Anna C. Nobre, Mark W. Woolrich
Published in: Imaging Neuroscience, Issue 2, 2024, Page(s) 1-26, ISSN 2837-6056
Publisher: MIT Press Direct
DOI: 10.1162/imag_a_00082

Within-cycle instantaneous frequency profiles report oscillatory waveform dynamics

Author(s): Quinn AJ, Lopes-dos-Santos V, Huang N, Liang W-K, Juan C-H, Yeh J-R, Nobre AC, Dupret D, and Woolrich MW
Published in: Journal of Neurophysiology, Issue 126:4, 2021, Page(s) 1190-1208, ISSN 1522-1598
Publisher: American Physiological Society
DOI: 10.1152/jn.00201.2021

Basal ganglia reign through downstream control of motor centers in midbrain and brain stem while updating cortex with efference copy information

Author(s): Grillner S and Thompson WS
Published in: Neuron, Issue 109(10), 2021, Page(s) 1587-1589, ISSN 1097-4199
Publisher: Cell Press
DOI: 10.1016/j.neuron.2021.04.015

Group‐level brain decoding with deep learning

Author(s): Richard Csaky, Mats W. J. van Es, Oiwi Parker Jones, Mark Woolrich
Published in: Human Brain Mapping, Issue 44, 2023, Page(s) 6105-6119, ISSN 1065-9471
Publisher: John Wiley & Sons Inc.
DOI: 10.1002/hbm.26500

Developmental decrease of entorhinal-hippocampal communication in immune-challenged DISC1 knockdown mice

Author(s): Xiaxia Xu, Lingzhen Song, Rebecca Kringel, Ileana L. Hanganu-Opatz
Published in: Nature Communications, Issue 12, 2022, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-021-27114-w

Multi-dynamic Modelling Reveals Strongly Time-varying Resting fMRI Correlations

Author(s): Usama Pervaiz, Diego Vidaurre, Chetan Gohil, Stephen M. Smith, Mark W. Woolrich
Published in: Medical Image Analysis, Issue 77:102366, 2022, ISSN 1361-8423
Publisher: Elsevier
DOI: 10.1101/2021.06.23.449584

Patient-specific modeling for guided rehabilitation of stroke patients: the BrainX3 use-case

Author(s): Vivek Sharma, Francisco Páscoa dos Santos, Paul F. M. J. Verschure
Published in: Frontiers in Neurology, Issue 14, 2023, ISSN 1664-2295
Publisher: Frontiers Research Foundation
DOI: 10.3389/fneur.2023.1279875

Pregnancy-induced maternal microchimerism shapes neurodevelopment and behavior in mice

Author(s): Steven Schepanski, Mattia Chini, Veronika Sternemann, Christopher Urbschat, Kristin Thiele, Ting Sun, Yu Zhao, Mareike Poburski, Anna Woestemeier, Marie-Theres Thieme, Dimitra E. Zazara, Malik Alawi, Nicole Fischer, Joerg Heeren, Nikita Vladimirov, Andrew Woehler, Victor G. Puelles, Stefan Bonn, Nicola Gagliani, Ileana L. Hanganu-Opatz, Petra C. Arck
Published in: Nature Communications, Issue 13, 2022, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-022-32230-2

The human posterior parietal cortex: effective connectome, and its relation to function

Author(s): Edmund T Rolls, Gustavo Deco, Chu-Chung Huang, Jianfeng Feng
Published in: Cerebral Cortex, Issue 33, 2023, Page(s) 3142-3170, ISSN 1047-3211
Publisher: Oxford University Press
DOI: 10.1093/cercor/bhac266

Interpretable full-epoch multiclass decoding for M/EEG

Author(s): Richard Csaky, Mats W.J. van Es, Oiwi Parker Jones, Mark Woolrich
Published in: bioRxiv, 2024, ISSN 2692-8205
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2023.03.13.532375

The cortical neurophysiological signature of amyotrophic lateral sclerosis

Author(s): Michael Trubshaw, Chetan Gohil, Katie Yoganathan, Oliver Kohl, Evan Edmond, Malcolm Proudfoot, Alexander G Thompson, Kevin Talbot, Charlotte J Stagg, Anna C Nobre, Mark Woolrich, Martin R Turner
Published in: Brain Communications, Issue 6, 2024, ISSN 2632-1297
Publisher: Oxford University Press
DOI: 10.1093/braincomms/fcae164

Data and model considerations for estimating time-varying functional connectivity in fMRI

Author(s): C Ahrends, A Stevner, U Pervaiz, ML Kringelbach, P Vuust, MW Woolrich, D Vidaurre
Published in: NeuroImage, Issue 252, 2022, Page(s) 119026, ISSN 1053-8119
Publisher: Academic Press
DOI: 10.1016/j.neuroimage.2022.119026

Inferring the dynamical effects of stroke lesions through whole-brain modeling

Author(s): Sebastian Idesis, Chiara Favaretto, Nicholas V. Metcalf, Joseph C. Griffis, Gordon L. Shulman, Maurizio Corbetta, Gustavo Deco
Published in: NeuroImage: Clinical, Issue 36, 2023, Page(s) 103233, ISSN 2213-1582
Publisher: Elsevier BV
DOI: 10.1016/j.nicl.2022.103233

Structural cerebellar reserve positively influences outcome after severe stroke

Author(s): Fatemeh Sadeghihassanabadi, Benedikt M Frey, Winifried Backhaus, Chi-un Choe, Simone Zittel, Gerhard Schön, Marlene Bönstrup, Bastian Cheng, Götz Thomalla, Christian Gerloff, Robert Schulz
Published in: Brain Communications, Issue 4, 2022, ISSN 2632-1297
Publisher: Oxford University Press
DOI: 10.1093/braincomms/fcac203

Bridging the gap between single receptor type activity and whole‐brain dynamics

Author(s): Dirk Jancke; Stefan Herlitze; Morten L. Kringelbach; Gustavo Deco
Published in: The FEBS Journal, 2021, ISSN 1742-4658
Publisher: Wiley
DOI: 10.1111/febs.15855

Functional harmonics reveal multi-dimensional basis functions underlying cortical organization

Author(s): Katharina Glomb, Morten L. Kringelbach, Gustavo Deco, Patric Hagmann, Joel Pearson, Selen Atasoy
Published in: Cell Reports, Issue 36, 2022, Page(s) 109554, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.1016/j.celrep.2021.109554

Dynamical consequences of regional heterogeneity in the brain’s transcriptional landscape

Author(s): Gustavo Deco, Kevin Aquino, Aurina Arnatkevičiūtė, Stuart Oldham, Kristina Sabaroedin, Nigel C. Rogasch, Morten L. Kringelbach, Alex Fornito
Published in: Science Advances, Issue 7(29), 2024, ISSN 2375-2548
Publisher: AAAS
DOI: 10.1101/2020.10.28.359943

Excitatory-inhibitory homeostasis and bifurcation control in the Wilson-Cowan model of cortical dynamics

Author(s): Francisco Páscoa dos Santos, Paul F. M. J. Verschure
Published in: PLOS Computational Biology, Issue 21, 2025, Page(s) e1012723, ISSN 1553-7358
Publisher: Public library of science
DOI: 10.1371/journal.pcbi.1012723

Characterisation of laminar and vascular spatiotemporal dynamics of CBV and BOLD signals using VASO and ME-GRE at 7T in humans

Author(s): Sebastian Dresbach, Renzo Huber, Omer Faruk Gulban, Alessandra Pizzuti, Robert Trampel, Dimo Ivanov, Nikolaus Weiskopf, Rainer Goebel
Published in: Imaging Neuroscience, Issue 2, 2024, Page(s) 1-16, ISSN 2837-6056
Publisher: MIT Press
DOI: 10.1101/2024.01.25.576050

Modelling on the very large-scale connectome

Author(s): Géza Ódor; Michael T Gastner; Jeffrey Kelling; Gustavo Deco
Published in: Journal of Physics: Complexity, Issue 2, 2021, Page(s) 045002, ISSN 2632-072X
Publisher: IOP Publishing
DOI: 10.1088/2632-072x/ac266c

Redefining stroke rehabilitation: Mobilizing the embodied goal-oriented brain

Author(s): Paul F.M.J. Verschure, Francisco Páscoa dos Santos, Vivek Sharma
Published in: Current Opinion in Neurobiology, Issue 83, 2024, Page(s) 102807, ISSN 0959-4388
Publisher: Elsevier BV
DOI: 10.1016/j.conb.2023.102807

Spatiotemporally Resolved Multivariate Pattern Analysis for M/EEG

Author(s): Cameron Higgins, Diego Vidaurre, Nils Kolling, Yunzhe Liu, Tim Behrens, Mark Woolrich
Published in: Human Brain Mapping, Issue 43(10), 2022, Page(s) 3062-3085, ISSN 1097-0193
Publisher: Wiley
DOI: 10.1101/2021.08.17.456594

Different MRI structural processing methods do not impact functional connectivity computation

Author(s): Lu Zhang, Lorenzo Pini, Maurizio Corbetta
Published in: Scientific Reports, Issue 13, 2023, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-023-34645-3

The arrow of time of brain signals in cognition: Potential intriguing role of parts of the default mode network

Author(s): Gustavo Deco, Yonatan Sanz Perl, Laura de la Fuente, Jacobo D. Sitt, B. T. Thomas Yeo, Enzo Tagliazucchi, Morten L. Kringelbach
Published in: Network Neuroscience, Issue 7, 2023, Page(s) 966-998, ISSN 2472-1751
Publisher: MIT Press Direct
DOI: 10.1162/netn_a_00300

Non-peer reviewed articles (3)

The Gaussian-Linear Hidden Markov model: a Python package

Author(s): Vidaurre, Diego; Larsen, Nick Y.; Masaracchia, Laura; Ruijters, Lenno R. P. T; Alonso, Sonsoles; Ahrends, Christine; Woolrich, Mark W.
Published in: arXiv, Issue arXiv:2312.07151, 2023, ISSN 2331-8422
Publisher: Cornell University
DOI: 10.48550/arxiv.2312.07151

Metastable Dynamics Emerge from Local Excitatory-Inhibitory Homeostasis in the Cortex at Rest

Author(s): Francisco Páscoa dos Santos, Paul FMJ Verschure
Published in: buiRxiv, Issue 2024.08.24.609501, 2024, ISSN 2692-8205
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2024.08.24.609501

Deep learning the arrow of time in brain activity: characterising brain-environment behavioural interactions in health and disease

Author(s): Gustavo Deco, Yonatan Sanz Perl, Jacobo D. Sitt, Enzo Tagliazucchi, Morten L. Kringelbach
Published in: bioRxiv, 2021, ISSN 2692-8205
Publisher: bioRxiv
DOI: 10.1101/2021.07.02.450899