Accelerated Development of multiple-stress tolerAnt PoTato

Livrables

Potato ‘omics data analysis pipelines standardised and made available for the scientific community (M30)

Initial Plan for Exploitation and Dissemination of Results PEDR (M6), which will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project (M12, 24 up to M48)

PEDR established

Initial Plan for Exploitation and Dissemination of Results PEDR will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project.

PEDR second update and adjustment

Initial Plan for Exploitation and Dissemination of Results PEDR (M6), which will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project (M12, 24 up to M48)

Communication infrastructure established

Communication infrastructure established; the project website goes online to allow sharing of generated data, and general information (M6)

StressKnowledgeMap

StressKnowledgeMap: web application enabling standardised construction of integrated knowledge network and its interrogation (M15)

PEDR third update

Initial Plan for Exploitation and Dissemination of Results PEDR (M6), which will define handling of IPR issues, goals/targets of dissemination and implementation in commercial products of the breeders. This plan will be continuously updated throughout the project (M12, 24 up to M48)

Data visualisation tools updated

Data visualisation tools updated based on the updates in knowledge network (M18)

ORD pilot and Data Management Plan

Data Management Plan DMP implemented and guidelines for Open Research Data pilot defined M6

Report on field day/workshop

One joint field day and one joint workshop organized with other EU projects funded under this call or in a similar topic (M24 and M42)

Report of farmers' perception survey

Descriptive report of farmers perception survey and set of recommendations for dissemination activities M12

Publications

TGA transcription factors—Structural characteristics as basis for functional variability

Auteurs: Špela Tomaž; Špela Tomaž; Kristina Gruden; Anna Coll
Publié dans: Crossref, Numéro 3, 2022, ISSN 1664-462X
Éditeur: Frontiers Media S. A.
DOI: 10.3389/fpls.2022.935819

Assimilate highway to sink organs – Physiological consequences of SP6A overexpression in transgenic potato (Solanum tuberosum L.)

Auteurs: Günter G.Lehretz SophiaSonnewald UweSonnewald
Publié dans: Journal of Plant Physiology, Numéro 226, 2021, Page(s) 153530, ISSN 0176-1617
Éditeur: Elsevier BV
DOI: 10.1016/j.jplph.2021.153530

pISA-tree - a data management framework for life science research projects using a standardised directory tree

Auteurs: Marko Petek, Maja Zagorščak, Andrej Blejec, Živa Ramšak, Anna Coll, Špela Baebler & Kristina Gruden
Publié dans: Scientific data, 2022, ISSN 2052-4463
Éditeur: Nature Research
DOI: 10.1038/s41597-022-01805-5

Cell-type proteomic and metabolomic resolution of early and late grain filling stages of wheat endosperm

Auteurs: Shuang Zhang, Arindam Ghatak, Mitra Mohammadi Bazargani, Hannes Kramml, Fujuan Zang, Shuang Gao, Živa Ramšak, Kristina Gruden, Rajeev K. Varshney, Dong Jiang, Palak Chaturvedi, Wolfram Weckwerth
Publié dans: Plant Biotechnology Journal, 2023, ISSN 1467-7652
Éditeur: John Wiley & Sons
DOI: 10.1111/pbi.14203

TERMINAL FLOWER‐1/CENTRORADIALIS inhibits tuberisation via protein interaction with the tuberigen activation complex

Auteurs: Zhang, X. Campbell, R. Ducreux, L. J. Morris, J. Hedley, P. E. Mellado‐Ortega, E. & Taylor, M. A.
Publié dans: The Plant Journal, Numéro 103, 2020, Page(s) 2263-2278, ISSN 1365-313X
Éditeur: Wiley
DOI: 10.1111/tpj.14898

Chloroplast redox state changes mark cell-to-cell signaling in the hypersensitive response

Auteurs: Tjaša Lukan, Anže Županič, Tjaša Mahkovec Povalej, Jacob O. Brunkard, Mirjam Kmetič, Mojca Juteršek, Špela Baebler, Kristina Gruden
Publié dans: New Physiologist, 2022, ISSN 1469-8137
Éditeur: John Wiley & Sons
DOI: 10.1111/nph.18425

Water stress resilient cereal crops: lessons from wild relatives

Auteurs: Toulotte JM, Pantazopoulou CK, Sanclemente MA, Voesenek LA, Sasidharan R.
Publié dans: Journal of Integrative Plant Biology, 2022, Page(s) Online ahead of print, ISSN 1365-313X
Éditeur: Wiley
DOI: 10.1111/jipb.13222

Organelles and phytohormones: a network of interactions in plant stress responses

Auteurs: Andras Bittner, Agata Cieśla, Kristina Gruden, Tjaša Lukan, Sakil Mahmud, Markus Teige, Ute C Vothknecht, Bernhard Wurzinger Author Notes
Publié dans: Journal of Experimental Botany, 2022, ISSN 1460-2431
Éditeur: Oxford University Press
DOI: 10.1093/jxb/erac384

Profiling of 1-aminocyclopropane-1-carboxylic acid and selected phytohormones in Arabidopsis using liquid chromatography-tandem mass spectrometry

Auteurs: Karady, Michal; Hladík, Pavel; Cermanová, Kateřina; Jiroutová, Petra; Antoniadi, Ioanna; Casanova-Sáez, Rubén; Ljung, Karin; Novák, Ondřej
Publié dans: Crossref, Numéro 1, 2024, ISSN 1746-4811
Éditeur: BioMed Central
DOI: 10.1186/s13007-024-01165-8

Low dose ribosomal DNA P-loop mutation affects development and enforces autophagy in Arabidopsis

Auteurs: Thiruvenkadam Shanmugam, Palak Chaturvedi, Deniz Streit, Arindam Ghatak, Thorsten Bergelt, Stefan Simm, Wolfram Weckwerth & Enrico Schleiff
Publié dans: RNA Biology, 2023, ISSN 1555-8584
Éditeur: Taylor&Francis
DOI: 10.1080/15476286.2023.2298532

stress knowledge map: a knowledge graph resource for systems biology analysis of plant stress responses

Auteurs: Carissa Bleker, Živa Ramšak, Andras Bittner, Vid Podpečan ,Maja Zagorščak, Bernhard Wurzinger, Špela Baebler, Marko Petek, Maja Križnik, Annelotte van Dieren, Juliane Gruber, Leila Afjehi-Sadat, Wolfram Weckwerth, Anže Županič, Markus Teige, Ute C. Vothknecht, Kristina Gruden
Publié dans: Plant Communications, Numéro Volume 5.Numéro. 5,May 13, 2024, 2024, ISSN 0092-8674
Éditeur: Cell Press
DOI: 10.1016/j.xplc.2024.100920

A helping hand when drowning: The versatile role of ethylene in root flooding resilience

Auteurs: Hendrika A.C.F. Leeggangers 1, Natalia Yaneth Rodriguez-Granados 1, Monika Gyöngyi Macias-Honti 1, Rashmi Sasidharan
Publié dans: Environmental and Experimental Botany, 2023, ISSN 1873-7307
Éditeur: Elsevier B.V.
DOI: 10.1016/j.envexpbot.2023.105422

A mini-TGA protein modulates gene expression through heterogeneous association with transcription factors

Auteurs: Špela Tomaž, Marko Petek, Tjaša Lukan, Karmen Pogačar, Katja Stare, Erica Teixeira Prates, Daniel A Jacobson, Jan Zrimec, Gregor Bajc, Matej Butala, Maruša Pompe Novak, Quentin Dudley, Nicola Patron, Ajda Taler-Verčič, Aleksandra Usenik, Dušan Turk, Salomé Prat, Anna Coll, Kristina Gruden
Publié dans: Plant Physiology, 2023, ISSN 0032-0889
Éditeur: American Society of Plant Biologists
DOI: 10.1093/plphys/kiac579

Cold plasma within a stable supercavitation bubble – A breakthrough technology for efficient inactivation of viruses in water

Auteurs: Arijana Filipić a, David Dobnik a, Ion Gutiérrez-Aguirre a, Maja Ravnikar a, Tamara Košir a, Špela Baebler a, Alja Štern b, Bojana Žegura b, Martin Petkovšek c, Matevž Dular c, Miran Mozetič d, Rok Zaplotnik d, Gregor Primc d
Publié dans: Enviroment International, 2023, ISSN 1873-6750
Éditeur: PERGAMON-ELSEVIER SCIENCE LTD.
DOI: 10.1016/j.envint.2023.108285

Spatial control of potato tuberization by the TCP transcription factor BRANCHED1b

Auteurs: Michael Nicolas 1 , Rafael Torres-Pérez 2 , Vanessa Wahl 3 , Eduard Cruz-Oró 4 , María Luisa Rodríguez-Buey 4 , Angel María Zamarreño 5 , Beatriz Martín-Jouve 6 , José María García-Mina 5 , Juan Carlos Oliveros 2 , Salomé Prat 4 7 , Pilar Cubas 8
Publié dans: Nature plants, 2022, ISSN 2055-0278
Éditeur: Nature Publishing Group
DOI: 10.1038/s41477-022-01112-2.

Farmers Feel the Climate Change: Variety Choice as an Adaptation Strategy of European Potato Farmers

Auteurs: Philipp von Gehren 1, Svenja Bomers 1, Tanja Tripolt 2, Josef Söllinger 3, Noémie Prat 1, Berta Redondo 4, Romans Vorss 4, Markus Teige 5 , Anita Kamptner 6 and Alexandra Ribarits 1,*
Publié dans: Climate, 2023, ISSN 2225-1154
Éditeur: MDPI
DOI: 10.3390/cli11090189

Allelic variants of a potato HEAT SHOCK COGNATE 70 gene confer improved tuber yield under a wide range of environmental conditions

Auteurs: Raymond Campbell, Laurence Ducreux, Graham Cowan, Vanessa Young, Gift Chinoko, Gloria Chitedze, Stanley Kwendani, Margaret Chiipanthenga, Craita E. Bita, Obed Mwenye, Hassan Were, Lesley Torrance, Sanjeev Kumar Sharma, Robert D. Hancock, Glenn J. Bryan, Mark Taylor
Publié dans: Food and Energy Security, 2022, ISSN 2048-3694
Éditeur: John Wiley & Sons
DOI: 10.1002/fes3.377

Biosensors: A Sneak Peek into Plant Cell’s Immunity

Auteurs: Valentina Levak 1,2,*, Tjaša Lukan 1 , Kristina Gruden 1 and Anna Coll 1
Publié dans: Life, 2021, ISSN 2075-1729
Éditeur: MDPI
DOI: 10.3390/life11030209

Phased, chromosome-scale genome assemblies of tetraploid potato reveals a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity

Auteurs: Genevieve Hoopes, Xiaoxi Meng, John P. Hamilton, Sai Reddy Achakkagari, Fernanda de Alves Freitas Guesdes, Marie E. Bolger, Joseph J. Coombs, Danny Esselink, Natalie R. Kaiser, Linda Kodde, Maria Kyriakidou, Brian Lavrijssen, Natascha van Lieshout, Rachel Shereda, Heather K. Tuttle, Brieanne Vaillancourt, Joshua C. Wood, Jan M. de Boer, Nolan Bornowski, Peter Bourke, David Douches, Herman J. van E
Publié dans: MOLECULAR PLANT, Numéro Online ahead of print, 2022, ISSN 1674-2052
Éditeur: Oxford University Press
DOI: 10.1016/j.molp.2022.01.003

Intertwined Roles of Reactive Oxygen Species and Salicylic Acid Signaling Are Crucial for the Plant Response to Biotic Stress

Auteurs: Tjaša Lukan and Anna Coll
Publié dans: Molecular Science, 2022, ISSN 1422-0067
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/ijms23105568

Methodologies for Discovery and Quantitative Profiling of sRNAs in Potato

Auteurs: DOBNIK, David, GRUDEN, Kristina, RAMŠAK, Živa, COLL RIUS, Anna
Publié dans: Methods in molecular biology, Numéro 2354, 2021, ISBN 978-1-0716-1609-3
Éditeur: Humana Press, cop.
DOI: 10.1007/978-1-0716-1609-3_11

ADAPT –Accelerated development of multiple-stress tolerant potato

Auteurs: Ribarits A, von Gehren P, Bomers S, Prat N, Tripolt T, Söllinger J
Publié dans: Vereinigung der Pflanzenzüchter und Saatgutkaufleute Österreichs (Ed), 71. Jahrestagung 2020, 2021, Page(s) 35-36
Éditeur: BOKU-University of Natural Resources and Life Sciences

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