Pandemic Preparedness and Response

Leistungen

Pandemic Modeling Tool (software and documentation)

Pandemic Modeling Tool software anddocumentation

Brand, Dissemination and Communications Strategy and Implementation Plan

Brand DisseminationandCommunications Strategy and Implementation Plan

Resource Planning System (software and documentation)

Resource Planning System software and documentation

Visual Analytics Component, API and developer documentation (version 2)

Visual Analytics Component API and developer documentation version 2

Report on social, ethical and legal issues in pandemic preparedness planning

Report on social ethical and legal issues in pandemic preparedness planning

Enhanced Influenzanet to include new events under surveillance and adapt to pandemic situations
Privacy, data protection, social and ethical impact assessment final report

Privacy data protection social and ethical impact assessment final report

Privacy, data protection, social and ethical impact assessment interim report

Privacy data protection social and ethical impact assessment interim report

Pandemic Communications Training syllabus and materials
Operational strategy for implementation of IT system
Social media mining component to support community surveillance
Training Resources & Repository on Simulation Exercise

Training Resources Repository onSimulation Exercise

Database schema and setup report
Three scenario scripts
Privacy, social & ethical issues preliminary guide

Privacysocialethicalissues preliminary guide

Report on demonstrations
Networking resources
KPIs and Evaluation Report
Pandemic Communications Toolkit
Toolkit with guidelines, protocols and resources on biosafety and biosecurity for first responders, clinical staff and laboratory personnel during cross-border responses

Toolkit with guidelines protocols andresources on biosafety and biosecurity for first responders clinical staff and laboratory personnel during crossborder responses

Visual Analytics Component, API and developer documentation (version 1)

Visual Analytics Component API and developer documentation version 1

API specification and documentation
Report on laboratory data sources including capture and integration of NGS data for pandemic management. Data sources specification document and database structure for WP3

Report on laboratory data sources including capture and integration of NGS data for pandemic management Data sources specification document and database structure for WP3

Dashboard advanced prototypes
Dashboard design
Scenarios analysis and pandemic communications requirements statement

Scenariosanalysis and pandemic communications requirements statement

List and description of selected data sources and analytical tools to monitor pandemics. FAIR-compliant metadata profiles. Data sources specification document and agreed database structure for WP3

List and description of selected data sources and analytical tools to monitor pandemics FAIRcompliant metadata profiles Data sources specification document and agreed database structure for WP3

Project Website

Data management plan

Dashboard initial prototype
Software to extract pandemic indicators from selected data sources

Veröffentlichungen

Anchoring the mean generation time in the SEIR to mitigate biases in ℜ0 estimates due to uncertainty in the distribution of the epidemiological delays

Autoren: Andrade Jair; Duggan Jim
Veröffentlicht in: R Soc Open Sci, Ausgabe Volume 10(8); 2023 Aug, 2023, ISSN 2054-5703
Herausgeber: Natioal Library of Medicine
DOI: 10.1098/rsos.230515

Genomic Characterization of Multidrug-Resistant Extended Spectrum β-Lactamase-Producing Klebsiella pneumoniae from Clinical Samples of a Tertiary Hospital in South Kivu Province, Eastern Democratic Republic of Congo

Autoren: Leonid M. Irenge; Jérôme Ambroise; Bertrand Bearzatto; Jean-François Durant; Maxime Bonjean; Jean-Luc Gala
Veröffentlicht in: Microorganissms, Ausgabe 7, 2023, ISSN 2076-2607
Herausgeber: MDPI
DOI: 10.3390/microorganisms11020525

Participatory Surveillance for COVID-19 Trend Detection in Brazil: Cross-sectional Study

Autoren: Wittwer Salome; Paolotti Daniela; Lichand Guilherme; Neto Onicio Leal
Veröffentlicht in: JMIR Public Health Surveillance, Ausgabe Vol 9 2023, 2023, ISSN 2369-2960
Herausgeber: JMIR
DOI: 10.2196/44517

Inferring the effective reproductive number from deterministic and semi-deterministic compartmental models using incidence and mobility data

Autoren: Jair Andrade, Jim Duggan
Veröffentlicht in: PLOS Computational Biology, Ausgabe 18 (6), 2022, Seite(n) e1010206, ISSN 1553-7358
Herausgeber: PLOS
DOI: 10.1371/journal.pcbi.1010206

A Bayesian approach to calibrate system dynamics models using Hamiltonian Monte Carlo

Autoren: Jair Andrade, Jim Duggan
Veröffentlicht in: System Dynamics Review, Ausgabe Volume37, Ausgabe 4, 2021, Seite(n) 283-309, ISSN 0883-7066
Herausgeber: John Wiley & Sons Inc.
DOI: 10.1002/sdr.1693

Exploring the Effect of Misinformation on Infectious Disease Transmission

Autoren: Nabeela Mumtaz, Caroline Green, Jim Duggan
Veröffentlicht in: Systems, Ausgabe 10, 2022, Seite(n) 50, ISSN 2079-8954
Herausgeber: MDPI open access journals
DOI: 10.3390/systems10020050

Attitudes towards booster, testing and isolation, and their impact on COVID-19 response in winter 2022/2023 in France, Belgium, and Italy: a cross-sectional survey and modelling study

Autoren: Giulia de Meijere, Eugenio Valdano, Claudio Castellano, Marion Debin, Charly Kengne-Kuetche, Clément Turbelin, Harold Noël, Joshua S. Weitz, Daniela Paolotti, Lisa Hermans, Niel Hens, Vittoria Colizza
Veröffentlicht in: The Lancet Regional Health - Europe, 2023, ISSN 2666-7762
Herausgeber: Elsevier
DOI: 10.1016/j.lanepe.2023.100614

On the many advantages of using the VariantExperiment class to store, exchange and analyze SARS-CoV-2 genomic data and associated metadata

Autoren: Jérôme Ambroise, Laurent Gatto, Julie Hurel, Bertrand Bearzatto, Jean-Luc Gala
Veröffentlicht in: Biorxiv, 2021, Seite(n) 1-7
Herausgeber: Cold Spring Harbour Laboratory
DOI: 10.1101/2021.04.05.438328

Global misinformation spillovers in the online vaccination debate before and during COVID-19

Autoren: Jacopo Lenti, Kyriaki Kalimeri, André Panisson, Daniela Paolotti, Michele Tizzani, Yelena Mejova, Michele Starnin
Veröffentlicht in: arXiv, 2023, ISSN 2331-8422
Herausgeber: arXiv.org
DOI: 10.48550/arxiv.2211.11495

Echoes through Time: Evolution of the Italian COVID-19 Vaccination Debate

Autoren: Giuseppe Crupi, Yelena Mejova, Michele Tizzani, Daniela Paolotti, Andre Panisson
Veröffentlicht in: Proceedings of the Sixteenth International AAAI Conference on Web and Social Media (ICWSM 2022), 2022, Seite(n) 1-12
Herausgeber: Cornell University
DOI: 10.48550/arxiv.2204.12943

Identifying essential resources for pandemic response in healthcare and public health: an international Delphi study within the EU-PANDEM-2 project

Autoren: Berend Beishuizen, Mart Stein, Anne-Romy Peelen , Joeri Buis, Alma Tostmann, Caroline Green, James Duggan, Máire Connolly, Chantal Bleeker-Rovers,Aura Timen
Veröffentlicht in: 17th World Congress on Public Health, 2023
Herausgeber: Population Medicine
DOI: 10.18332/popmed/163743

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