DNA-Fast light dRiven data technologY with multiplexed optical encoding and readout

Información del proyecto

DNA-FAIRYLIGHTS

Identificador del acuerdo de subvención: 964995

DOI

10.3030/964995

Proyecto cerrado

Fecha de la firma de la CE 22 Enero 2021

Fecha de inicio 1 Septiembre 2021

Fecha de finalización 28 Febrero 2025

Financiado con arreglo a

• EXCELLENT SCIENCE - Future and Emerging Technologies (FET)

Coste total

€ 3 116 536,25

Aportación de la UE

€ 3 116 536,25

Coordinado por

FONDAZIONE ISTITUTO ITALIANO DI TECNOLOGIA
Italy

CORDIS proporciona enlaces a los documentos públicos y las publicaciones de los proyectos de los programas marco HORIZONTE.

Los enlaces a los documentos y las publicaciones de los proyectos del Séptimo Programa Marco, así como los enlaces a algunos tipos de resultados específicos, como conjuntos de datos y «software», se obtienen dinámicamente de OpenAIRE .

Resultado final

Demonstrators, pilots, prototypes (2)

Scale up model.
Electro-optical read out of high density data structures with nanopores and optical detection

Documents, reports (3)

Characterization and evaluation of dynamic control of NPs and NCs positons and orientations.
Report on project communication n.1

Report on project communication n 1

Report on project communication n. 2

Websites, patent fillings, videos etc. (1)

Project WebSite and Logo

realization and publication online of the project website

Publicaciones

Peer reviewed articles (28)

DNA Volume, Topology, and Flexibility Dictate Nanopore Current Signals

Autores: Yunxuan Li, Sarah E. Sandler, Ulrich F. Keyser, Jinbo Zhu
Publicado en: Nano Letters, Edición 23, 2023, Página(s) 7054-7061, ISSN 1530-6984
Editor: American Chemical Society
DOI: 10.1021/acs.nanolett.3c01823

Magnetic control of particle trapping in a hybrid plasmonic nanopore

Autores: Nicolo Maccaferri, Paolo Vavassori, and Denis Garoli
Publicado en: Applied physics letters, 2021, ISSN 0003-6951
Editor: American Institute of Physics
DOI: 10.1063/5.0046245

Aptamer Conformational Dynamics Modulate Neurotransmitter Sensing in Nanopores

Autores: Annina Stuber, Ali Douaki, Julian Hengsteler, Denis Buckingham, Dmitry Momotenko, Denis Garoli, and Nako Nakatsuka
Publicado en: ACS Nano, 2023, ISSN 1936-0851
Editor: American Chemical Society
DOI: 10.1021/acsnano.3c05377

Dynamics of ultrafine silver implanted DNA nanowire formation

Autores: Qifei Ma, Mauro Chinappi, Ali Douaki, Yanqiu Zou, Huaizhou Jin, Emiliano Descrovi, Roman Krahne, Remo Proietti Zaccaria, Roberto Marotta, Weihong Wang, Dan Cojoc, Karol kołątaj, Guillermo Acuna, Shangzhong Jin, Denis Garoli
Publicado en: Nanoscale, Edición 17, 2025, Página(s) 16342-16348, ISSN 2040-3364
Editor: Royal Society of Chemistry
DOI: 10.1039/d5nr00934k

Nanopore detection of single-nucleotide RNA mutations and modifications with programmable nanolatches

Autores: Yunxuan Li, Siong Chen Meng, Yesheng Wang, Casey M. Platnich, Max K. Earle, Elli Mylona, Plamena Naydenova, Stephen Baker, Jinbo Zhu, Ulrich F. Keyser
Publicado en: Nature Nanotechnology, 2025, ISSN 1748-3387
Editor: Nature Publishing Group
DOI: 10.1038/s41565-025-01965-6

Modulating Lipid Membrane Morphology by Dynamic DNA Origami Networks

Autores: Juanjuan Yang, Kevin Jahnke, Ling Xin, Xinxin Jing, Pengfei Zhan, Andreas Peil, Alessandra Griffo, Marko Škugor, Donglei Yang, Sisi Fan, Kerstin Göpfrich, Hao Yan, Pengfei Wang, Na Liu
Publicado en: Nano Letters, Edición 23, 2023, Página(s) 6330-6336, ISSN 1530-6984
Editor: American Chemical Society
DOI: 10.1021/acs.nanolett.3c00750

Detection of protein oligomers with nanopores 

Autores: Robert I. Horne, Sarah E. Sandler, Michele Vendruscolo, Ulrich F. Keyser
Publicado en: Nature Reviews Chemistry, Edición 9, 2025, Página(s) 224-240, ISSN 2397-3358
Editor: Springer Science and Business Media LLC
DOI: 10.1038/s41570-025-00694-7

Dry synthesis of bi-layer nanoporous metal films as plasmonic metamaterial

Autores: Vincenzo Caligiuri, Hyunah Kwon, Andrea Griesi, Yurii P. Ivanov, Andrea Schirato, Alessandro Alabastri, Massimo Cuscunà, Gianluca Balestra, Antonio De Luca, Tlek Tapani, Haifeng Lin, Nicolò Maccaferri, Roman Krahne, Giorgio Divitini, Peer Fischer, Denis Garoli
Publicado en: Nanophotonics, Edición 13, 2024, Página(s) 1159-1167, ISSN 2192-8614
Editor: Walter de Gruyter GmbH
DOI: 10.1515/nanoph-2023-0942

Detection of small-sized DNA fragments in a glassy nanopore by utilization of CRISPR-Cas12a as a converter system

Autores: Shumin Zhang, Minyi Liu, Haofa Cui, Muhammad Asad Ziaee, Rongwei Sun, Liting Chen, Daqi Chen, Denis Garoli and Jiahai Wang
Publicado en: Analyst, Edición 13645528, 2022, ISSN 1364-5528
Editor: Royal Society of Chemistry
DOI: 10.1039/d1an02313f

Biomolecular ligands as tools to modulate the optical and chiroptical properties of gold nanoclusters

Autores: Laura Saa, Manuel Núñez-Martínez, Eva Carpintero-Cueto, Aitziber L. Cortajarena
Publicado en: Nanoscale, Edición 17, 2025, Página(s) 3671-3687, ISSN 2040-3364
Editor: Royal Society of Chemistry
DOI: 10.1039/d4nr04267k

Plasmonic Photochemistry as a Tool to Prepare Metallic Nanopores with Controlled Diameter for Optimized Detection of Single Entities

Autores: German Lanzavecchia, Joel Kuttruff, Andrea Doricchi, Ali Douaki, Krishnadas Kumaranchira Ramankutty, Isabel García, Lyuye Lin, Alba Viejo Rodríguez, Thomas Wågberg, Roman Krahne, Nicolò Maccaferri, Denis Garoli
Publicado en: Advanced Optical Materials, 2023, Página(s) 2300786, ISSN 2195-1071
Editor: Wyley
DOI: 10.1002/adom.202300786

Chiroptical hybrid nanomaterials based on metal nanoparticles and biomolecules

Autores: Manuel Núñez-Martínez, Jinyi Dong, Isabel García, Luis M. Liz-Marzán
Publicado en: Advances in Colloid and Interface Science, Edición 341, 2025, Página(s) 103501, ISSN 0001-8686
Editor: Elsevier BV
DOI: 10.1016/j.cis.2025.103501

Disordered plasmonic system with dense copper nano-island morphology

Autores: Tlek Tapani, Vincenzo Caligiuri, Yanqiu Zou, Andrea Griesi, Yurii P. Ivanov, Massimo Cuscunà, Gianluca Balestra, Haifeng Lin, Anastasiia Sapunova, Paolo Franceschini, Andrea Tognazzi, Costantino De Angelis, Giorgio Divitini, Riccardo Carzino, Hyunah Kwon, Peer Fischer, Roman Krahne, Nicolò Maccaferri, Denis Garoli
Publicado en: Nanophotonics, Edición 14, 2025, Página(s) 2151-2160, ISSN 2192-8614
Editor: Walter de Gruyter GmbH
DOI: 10.1515/nanoph-2024-0743

Universal Click-Chemistry Approach for the DNA Functionalization of Nanoparticles

Autores: Nicole Siegel, Hiroaki Hasebe, Germán Chiarelli, Denis Garoli, Hiroshi Sugimoto, Minoru Fujii, Guillermo P. Acuna, Karol Kołątaj
Publicado en: Journal of the American Chemical Society, Edición 146, 2024, Página(s) 17250-17260, ISSN 0002-7863
Editor: American Chemical Society
DOI: 10.1021/jacs.4c03833

High-Frequency Light Rectification by Nanoscale Plasmonic Conical Antenna in Point-Contact-Insulator-Metal Architecture

Autores: Rajeshkumar Mupparapu,Joao Cunha,Francesco Tantussi,Andrea Jacassi,Leopold Summerer,Maddalena Patrini,Andrea Giugni,Lorenzo Maserati,Alessandro Alabastri,Denis Garoli,Remo Proietti Zaccaria
Publicado en: Advanced energy materials, 2022, ISSN 1614-6840
Editor: Wiley
DOI: 10.1002/aenm.202103785

Chemical annealing restructures RNA for nanopore detection

Autores: Casey Platnich, Max Earle, Ulrich Keyser
Publicado en: Journal of the american chemical society, 2024, ISSN 1520-5126
Editor: American chemical society
DOI: 10.26434/chemrxiv-2024-2pm9p

A digital twin for DNA data storage based on comprehensive quantification of errors and biases

Autores: Andreas L. Gimpel, Wendelin J. Stark, Reinhard Heckel & Robert N. Grass
Publicado en: Nature Communications, 2023, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-023-41729-1

Enhanced Optical Spectroscopy for Multiplexed DNA and Protein-Sequencing with Plasmonic Nanopores: Challenges and Prospects

Autores: Wang Li, Juan Zhou, Nicolò Maccaferri, Roman Krahne, Kang Wang, and Denis Garoli
Publicado en: Analytical Chemistry, 2022, ISSN 1520-6882
Editor: American Chemical Society
DOI: 10.1021/acs.analchem.1c04459

Emerging Approaches to DNA Data Storage: Challenges and Prospects

Autores: Andrea Doricchi, Casey M. Platnich, Andreas Gimpel, Friederikee Horn, Max Earle, German Lanzavecchia, Aitziber L. Cortajarena, Luis M. Liz-Marzán, Na Liu, Reinhard Heckel, Robert N. Grass, Roman Krahne, Ulrich F. Keyser, and Denis Garoli
Publicado en: ACS Nano, Edición 16, 2022, ISSN 1936-086X
Editor: Americal Chemical Society
DOI: 10.1021/acsnano.2c06748

Transformable Plasmonic Helix with Swinging Gold Nanoparticles

Autores: Andreas Peil, Dr. Pengfei Zhan, Dr. Xiaoyang Duan, Prof. Roman Krahne, Dr. Denis Garoli, Prof. Dr. Luis M. Liz-Marzán, Prof. Dr. Na Liu
Publicado en: Angewandte Chemie, 2022, ISSN 1521-3773
Editor: wyley
DOI: 10.1002/anie.202213992

Nanoporous Metals: From Plasmonic Properties to Applications in Enhanced Spectroscopy and Photocatalysis

Autores: Alemayehu Nana Koya, Xiangchao Zhu, Nareg Ohannesian, A. Ali Yanik, Alessandro Alabastri, Remo Proietti Zaccaria, Roman Krahne, Wei-Chuan Shih, and Denis Garoli
Publicado en: ACS Nano, Edición 15, 2021, Página(s) 6038–6060, ISSN 1936-0851
Editor: American Chemical Society
DOI: 10.1021/acsnano.0c10945

Chemical unclonable functions based on operable random DNA pools

Autores: Anne M. Luescher, Andreas L. Gimpel, Wendelin J. Stark, Reinhard Heckel, Robert N. Grass
Publicado en: Nature Communications, Edición 15, 2024, ISSN 2041-1723
Editor: Nature Publishing Group
DOI: 10.1038/s41467-024-47187-7

Recent Advances in DNA Origami-Engineered Nanomaterials and Applications

Autores: Pengfei Zhan, Andreas Peil, Qiao Jiang, Dongfang Wang, Shikufa Mousavi, Qiancheng Xiong, Qi Shen, Yingxu Shang, Baoquan Ding, Chenxiang Lin, Yonggang Ke, Na Liu
Publicado en: Chemical Reviews, Edición 123, 2023, Página(s) 3976-4050, ISSN 0009-2665
Editor: American Chemical Society
DOI: 10.1021/acs.chemrev.3c00028

Modular Plasmonic Nanopore for Opto‐Thermal Gating

Autores: Ali Douaki, Shukun Weng, German Lanzavecchia, Anastasiia Sapunova, Annina Stuber, Gabriele Nanni, Nako Nakatsuka, Makusu Tsutsui, Kazumichi Yokota, Roman Krahne, Denis Garoli
Publicado en: Advanced Optical Materials, Edición 13, 2025, ISSN 2195-1071
Editor: Wiley
DOI: 10.1002/adom.202402189

UV-SERS monitoring of plasmonic photodegradation of biomolecules on aluminum platforms decorated with rhodium nanoparticles

Autores: Yanqiu Zou, Luca Mattarozzi, Huaizhou Jin, Qifei Ma, Sandro Cattarin, Shukun Weng, Ali Douaki, German Lanzavecchia, Karol Kołątaj, Nicco Corduri, Ben Johns, Nicolò Maccaferri, Guillermo Acuna, Zhenrong Zheng, Shangzhong Jin, Denis Garoli
Publicado en: Nanoscale Advances, 2025, ISSN 2516-0230
Editor: Royal Society of Chemistry (RSC)
DOI: 10.1039/d5na00486a

Advances in ultrafast plasmonics

Autores: Alemayehu Nana Koya ; Marco Romanelli ; Joel Kuttruff; Nils Henriksson ; Andrei Stefancu ; Gustavo Grinblat ; Aitor De Andres ; Fritz Schnur ; Mirko Vanzan ; Margherita Marsili ; Mahfujur Rahaman ; Alba Viejo Rodríguez ; Tlek Tapani ; Haifeng Lin ; Bereket Dalga Dana ; Jingquan Lin ; Grégory Barbillon ; Remo Proietti Zaccaria ; Daniele Brida ; Deep Jariwala ; László Veisz ; Emiliano Cor
Publicado en: Applied Physics Review, 2023, ISSN 1931-9401
Editor: AIP Publishing LLC
DOI: 10.1063/5.0134993

Porous aluminum decorated with rhodium nanoparticles: preparation and use as a platform for UV SERS

Autores: Shrobona Banerjee, Luca Mattarozzi, Nicolò Maccaferri, Sandro Cattarin, Shukun Weng, Ali Douaki, German Lanzavecchia, Anastasiia Sapunova, Francesco D'Amico, Qifei Ma, Yanqiu Zou, Roman Krahne, Janina Kneipp, Denis Garoli
Publicado en: Materials Advances, Edición 5, 2024, Página(s) 6248-6254, ISSN 2633-5409
Editor: Royal Society of Chemistry (RSC)
DOI: 10.1039/d4ma00203b

Challenges for error-correction coding in DNA data storage: photolithographic synthesis and DNA decay

Autores: Andreas L. Gimpel, Wendelin J. Stark, Reinhard Heckel, Robert N. Grass
Publicado en: Digital Discovery, Edición 3, 2024, Página(s) 2497-2508, ISSN 2635-098X
Editor: Royal Society of Chemistry (RSC)
DOI: 10.1039/d4dd00220b

Non-peer reviewed articles (3)

Nanopore detection of modified RNA and DNA with nucleic acid catalyst-free click chemistry

Autores: Iva Mohora, Gerardo Patiño Guillén, Kevin Neis, Julián Valero, Ulrich Keyser, Filip Boskovic
Publicado en: chemxiv, 2024, ISSN 0000-0000
Editor: chemrxiv
DOI: 10.26434/chemrxiv-2024-swxn6

Single-Molecule Quantification of RNA Degradation with Nanopore Sensing

Autores: Mohammed Alawami, Max Earle, Ulrich Keyser, Casey Platnich
Publicado en: Chemrxiv, 2025, ISSN 0000-0000
Editor: chemrxiv
DOI: 10.26434/chemrxiv-2025-th9vf

Corrigendum to “Chiroptical hybrid nanomaterials based on metal nanoparticles and biomolecules” [Adv. Colloid Interface Sci. 341 (2025) 103501]

Autores: Manuel Núñez-Martínez, Jinyi Dong, Isabel García, Luis M. Liz-Marzán
Publicado en: Advances in Colloid and Interface Science, Edición 342, 2025, Página(s) 103560, ISSN 0001-8686
Editor: Elsevier BV
DOI: 10.1016/j.cis.2025.103560