The Paris DYNAMO Fellowship Programme

Project Information

FP-DYNAMO-PARIS

Grant agreement ID: 101034407

DOI

10.3030/101034407

Project closed

EC signature date 19 April 2021

Start date 1 September 2021

End date 31 August 2026

Funded under

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Total cost

€ 2 795 280,00

EU contribution

€ 1 397 640,00

Coordinated by

CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS
France

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Documents, reports (2)

Link for Euraxess website for Call 2

Inform the Project Officer on publishing each call for proposals by sending the link to the Euraxess website and a screen shot of the related call announcement

Link to Euraxess website for Call 1

Inform the Project Officer on publishing each call for proposals by sending the link to the Euraxess website and a screen shot of the related call announcement

Publications

Other (4)

Studying the regulons of OmrA and OmrB paralogous small RNAs reveals targets involved in central carbon metabolism and lipogenesis

Author(s): Alexey Korepanov, Jonathan Jagodnik, Fanny Quenette, Thao Nguyen Le Lam, Marion Hamon, Jade Mathis De Fromont, Odile Sismeiro, Valentin Gherdol-Nouvion, Alexandre Maes, Maude Guillier
Published in: BioRxiv, 2026
Publisher: openRxiv
DOI: 10.64898/2026.06.26.734639

30S-seq redefines the bacterial Ribosome Binding Site

Author(s): Jonathan Jagodnik, Valentin Gherdol-Nouvion, Mira Al Sahmarani, Alexandre Maes, Maude Guillier
Published in: BioRxiv, 2026
Publisher: openRxiv
DOI: 10.1101/2025.04.04.647229

The first photosynthetic mutant in diatoms targets the subunit γ of plastidial ATP synthase and reveals a key role of thylakoid electrochemical proton gradient in photosynthesis regulation and heterotrophic metabolism

Author(s): Erik Jensen, Sien Audoor, Richard Kuras, Brignone Seleem, Alessandra Rogato, Giuliana D’Ippolito, Giovanna Benvenuto, Angelo Fontana, Yves Choquet, Benjamin Bailleul, Angela Falciatore
Published in: BioRxiv, 2026
Publisher: openRxiv
DOI: 10.1101/2025.10.10.681070

F1F0-ATP-synthase subunit b head-to-head interactions shape intracellular membranes in Escherichia coli

Author(s): Mukul S Kareya, Jorge Royes, Federica Angius, Florence Szczepaniak, Francesco Boldrin, Marion Hamon, Pauline Talbot, Oana Ilioaia, Celine Madigou, Christophe Tribet, Francois Dehez, Florent Waltz, Francesca Zito, Bruno MIROUX
Published in: BioRxiv, 2026
Publisher: openRxiv
DOI: 10.64898/2026.03.03.708934

Peer reviewed articles (18)

Structural profiles of the full phagocyte NADPH oxidase unveiled by combining computational biology and experimental knowledge

Author(s): Sana Aimeur, Burcu Aykac Fas, Xavier Serfaty, Hubert Santuz, Sophie Sacquin-Mora, Tania Bizouarn, Antoine Taly, Laura Baciou
Published in: Journal of Biological Chemistry, Issue 300, 2025, Page(s) 107943, ISSN 0021-9258
Publisher: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1016/j.jbc.2024.107943

A Perspective on the Prospective Use of AI in Protein Structure Prediction

Author(s): Raphaelle Versini, Sujith Sritharan, Burcu Aykac Fas, Thibault Tubiana, Sana Zineb Aimeur, Julien Henri, Marie Erard, Oliver Nüsse, Jessica Andreani, Marc Baaden, Patrick Fuchs, Tatiana Galochkina, Alexios Chatzigoulas, Zoe Cournia, Hubert Santuz, Sophie Sacquin-Mora, Antoine Taly
Published in: Journal of Chemical Information and Modeling, Issue 64, 2024, Page(s) 26-41, ISSN 1549-9596
Publisher: American Chemical Society
DOI: 10.1021/acs.jcim.3c01361

Structure and elasticity of healthy and Alzheimer's disease cell membranes revealed by molecular dynamics simulations

Author(s): Thi Ly Mai, Hoa Thi Nguyen, Philippe Derreumaux, Phuong H. Nguyen
Published in: Proteins: Structure, Function, and Bioinformatics, Issue 93, 2025, Page(s) 1349-1360, ISSN 0887-3585
Publisher: Wiley-Liss Inc
DOI: 10.1002/prot.26508

Structure and Elasticity of Mitochondrial Membranes: A Molecular Dynamics Simulation Study

Author(s): Thi Ly Mai, Philippe Derreumaux, Phuong H. Nguyen
Published in: The Journal of Physical Chemistry B, Issue 127, 2023, Page(s) 10778-10791, ISSN 1520-6106
Publisher: American Chemical Society
DOI: 10.1021/acs.jpcb.3c05112

The thiolation of U34 at carbon 2 in tRNA by Escherichia coli MnmA precedes modification at carbon 5 and is dependent on a [4Fe-4S] cluster

Author(s): Sylvain Gervason, Sambuddha Sen, Jingjing Zhou, Karolina Podskoczyj, Grazyna Leszczynska, Sylvain Caillat, Jean-Luc Ravanat, Marc Fontecave, Béatrice Golinelli-Pimpaneau
Published in: Journal of Inorganic Biochemistry, Issue 274, 2026, Page(s) 113064, ISSN 0162-0134
Publisher: Elsevier BV
DOI: 10.1016/j.jinorgbio.2025.113064

Status of Alzheimer’s and Parkinson’s Disease Detections and Treatments

Author(s): Phuong H. Nguyen, Philippe Derreumaux
Published in: ACS Chemical Neuroscience, Issue 17, 2026, Page(s) 2441-2453, ISSN 1948-7193
Publisher: American Chemical Society
DOI: 10.1021/acschemneuro.6c00096

Modeling stable cavitation of coated microbubbles: A framework integrating smoothed dissipative particle dynamics and the Rayleigh–Plesset equation

Author(s): Phuong H. Nguyen
Published in: The Journal of Chemical Physics, Issue 161, 2024, ISSN 0021-9606
Publisher: American Institute of Physics
DOI: 10.1063/5.0220395

Disentangling the pseudoknots of toxin translation

Author(s): Jonathan Jagodnik, Fabien Darfeuille, Maude Guillier
Published in: Proceedings of the National Academy of Sciences, Issue 121, 2024, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.2411591121

Mitofusin-mediated contacts between mitochondria and peroxisomes regulate mitochondrial fusion

Author(s): Cynthia Alsayyah, Manish K. Singh, Maria Angeles Morcillo-Parra, Laetitia Cavellini, Nadav Shai, Christine Schmitt, Maya Schuldiner, Einat Zalckvar, Adeline Mallet, Naïma Belgareh-Touzé, Christophe Zimmer, Mickaël M. Cohen
Published in: PLOS Biology, Issue 22, 2024, Page(s) e3002602, ISSN 1545-7885
Publisher: Public Library of Science (PLoS)
DOI: 10.1371/journal.pbio.3002602

Molecular dynamics simulation of cancer cell membrane perforated by shockwave induced bubble collapse

Author(s): Nguyen Hoang Linh, Viet Hoang Man, Mai Suan Li, Junmei Wang, Philippe Derreumaux, Thi Ly Mai, Phuong H. Nguyen
Published in: The Journal of Chemical Physics, Issue 157, 2023, ISSN 0021-9606
Publisher: American Institute of Physics
DOI: 10.1063/5.0105675

Riboswitch and small RNAs modulate <i>btuB</i> translation initiation in <i>Escherichia coli</i> and trigger distinct mRNA regulatory mechanisms

Author(s): Laurène Bastet, Alexey P Korepanov, Jonathan Jagodnik, Jonathan P Grondin, Anne-Marie Lamontagne, Maude Guillier, Daniel A Lafontaine
Published in: Nucleic Acids Research, Issue 52, 2024, Page(s) 5852-5865, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkae347

Advances in Human Pre-tRNA Maturation: TRMT10C and ELAC2 in Focus

Author(s): Juhi Sikarwar, Vincent Meynier, Carine Tisné
Published in: Journal of Molecular Biology, Issue 437, 2026, Page(s) 168989, ISSN 0022-2836
Publisher: Academic Press
DOI: 10.1016/j.jmb.2025.168989

A constricted mitochondrial morphology formed during respiration

Author(s): Manish K. Singh, Laetitia Cavellini, Maria Angeles Morcillo-Parra, Christina Kunz, Mickaël Lelek, Perrine Bomme, Aurélia Barascu, Cynthia Alsayyah, Maria Teresa Teixeira, Naïma Belgareh-Touzé, Adeline Mallet, Lea Dietrich, Christophe Zimmer, Mickael M. Cohen
Published in: Nature Communications, Issue 16, 2025, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-025-60658-9

Dissecting the Mechanism of Biosynthesis of Sulfurated Biomolecules: The Case of tRNA Sulfuration

Author(s): Sylvain Gervason, Marc Fontecave, Béatrice Golinelli-Pimpaneau
Published in: Accounts of Chemical Research, Issue 58, 2025, Page(s) 3146-3153, ISSN 0001-4842
Publisher: American Chemical Society
DOI: 10.1021/acs.accounts.5c00485

Control of iron acquisition by multiple small RNAs unravels a new role for transcriptional terminator loops in gene regulation

Author(s): Eugenio Solchaga Flores, Jonathan Jagodnik, Fanny Quenette, Alexey Korepanov, Maude Guillier
Published in: Nucleic Acids Research, Issue 52, 2025, Page(s) 13775-13791, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkae1131

Stability and cavitation of nanobubble: Insights from large-scale atomistic molecular dynamics simulations

Author(s): Viet Hoang Man, Mai Suan Li, Philippe Derreumaux, Phuong H. Nguyen
Published in: The Journal of Chemical Physics, Issue 161, 2024, ISSN 0021-9606
Publisher: American Institute of Physics
DOI: 10.1063/5.0230903

Purinosome Unmasked: Exploring the Molecular-Scale Structure of a Purinosome Complex In Silico

Author(s): Florencia Klein, Stepan Timr, Simon Ebbinghaus, Fabio Sterpone
Published in: The Journal of Physical Chemistry Letters, 2025, Page(s) 8252-8261, ISSN 1948-7185
Publisher: American Chemical Society
DOI: 10.1021/acs.jpclett.5c01870

Evolution, structure and function of L-cysteine desulfidase, an enzyme involved in sulfur metabolism in the methanogenic archeon Methanococcus maripaludis

Author(s): Sylvain Gervason, Paolo Zecchin, Elliot B. Shelton, Nisha He, Ludovic Pecqueur, Pierre Simon Garcia, Taiwo Akinyemi, Nadia Touati, Ornella Bimai, Christophe Velours, Jean-Luc Ravanat, Bruno Faivre, William B. Whitman, Marc Fontecave, Béatrice Golinelli-Pimpaneau
Published in: Communications Biology, Issue 8, 2025, ISSN 2399-3642
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/s42003-025-09053-0