During the reporting period, significant technical and scientific progress was made in order to explore in-vivo neuronal activity in the PER during a whisker deflection task in head-fixed mice.
I designed, built and troubleshooted a novel dual-Neuropixel 1.0 recording setup, which enabled simultaneous recordings from the PER, BAR and other cortical and associative areas. This setup also incorporated behavioral tracking of running speed and whisking. To investigate sensory information processing under neutral valence conditions, I implemented a custom tactile stimulation protocol using piezo actuators to deliver whisker deflections. Although efforts were made to implement a reward-based (positive valence) protocol using liquid reward (i.e. chocolate milk), technical challenges such as electrical noise and issues in operant conditioning training prevented the achievement of all the objectives. I did develop a solution for these issues using infrared lick detection, but I was unable to implement it within the timeline of this project.
Despite these limitations, the experiments provided a dataset that enabled us to analyze how sensory stimuli are processed across cortical regions. Notably, primary sensory areas like BAR exhibited strong stimulus discrimination capabilities at the population level, while the PER showed reduced discriminability, highlighting its distinct role in sensory integration. Analysis of spiking activity also revealed functionally diverse unit types within the PER, suggesting specialized roles in processing tactile information. Furthermore, firing rate comparisons across locomotion and stillness showed significant modulation in primary cortices but stable activity in association areas such as PER and TeA.
Progress on mapping inputs from the basolateral amygdala (BLA) to the PER was more limited. Due to the demanding nature of the in-vivo experiments in work package 1, the initial tracing experiments were not extended; however, existing retrograde tracing data in the host lab were analyzed. Unexpectedly, the majority of labeled neurons were found in the lateral amygdala (LA) rather than the BLA, suggesting species-specific differences from canonical models based largely on studies in cats. Furthermore, our in-vivo recordings from the PER and ERC revealed poor information transfer between these two areas, possibly due to strong local inhibition within the PER.
In summary, while the implementation of reward-related paradigms was not completed, the project delivered important insights into how the PER and related cortical areas respond to neutral tactile stimuli. The results suggest a context-dependent gating mechanism for information flow within the medial temporal lobe and raise new questions regarding the role of amygdalar nuclei in modulating PER activity.