Next generation imaging technologies to probe structure and function of biological specimen across scales in their natural context

Project Information

IMAGINE

Grant agreement ID: 101094250

DOI

10.3030/101094250

EC signature date 2 December 2022

Start date 1 May 2023

End date 30 April 2028

Funded under

• Research infrastructures

Total cost

€ 9 569 677,52

EU contribution

€ 9 569 677,50

Coordinated by

EUROPEAN MOLECULAR BIOLOGY LABORATORY
Germany

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Deliverables

Documents, reports (2)

Publication of project website

Deliverable 44 (also D13.3) is associated with WP13 and pat of Task 13.2: Establish and implement internal and external communication channels (Lead: EMBL-HD; Participants: Euro-BioImaging ERIC, Instruct ERIC)

Report on establishment of Project Management structure and procedures

Deliverable 42 (also D13.1) is associated with WP13 and is part of Task 13.1: Establish and implement the Project Management structure (Lead: EMBL-HD; Participants: Euro-BioImaging, Instruct ERIC, EMBRC ERIC, ESRF, MPG, SU)

Data Management Plan (1)

IMAGINE Data Management Plan

Deliverable 43 (also D13.2) is associated with WP13 and concludes Task 13.1: Establish and implement the Project Management structure (Lead: EMBL-HD; Participants: Euro-BioImaging, Instruct ERIC, EMBRC ERIC, ESRF, MPG, SU)

Publications

Peer reviewed articles (7)

Cryo-plasma FIB/SEM volume imaging of biological specimens

Author(s): Dumoux, M., Glen, T., Smith, J.L., Ho, E.M., Perdigão, L.M., Pennington, A., Klumpe, S., Yee, N.B., Farmer, D.A., Lai, P.Y. and Bowles, W.
Published in: eLife Sciences, Issue eLife 12:e83623., 2023, ISSN 2050-084X
Publisher: eLife Sciences Publications
DOI: 10.7554/eLife.83623

Plasma FIB milling for the determination of structures in situ

Author(s): Casper Berger, Maud Dumoux, Thomas Glen, Neville B.-y. Yee, John M. Mitchels, Zuzana Patáková, Michele C. Darrow, James H. Naismith & Michael Grange
Published in: Nature Communications, Issue Article number 629 (2023), 2023, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-36372-9

ToMoDL: A model-based deep learning framework for optical projection tomography

Author(s): Marcos Obando, Andrea Bassi, Nicolas Ducros, Germán Mato, Teresa Correia
Published in: Research Square, Issue Article no. 21735 (2023), 2023, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-023-47650-3

Serial Lift-Out: sampling the molecular anatomy of whole organisms

Author(s): Oda Helene Schiøtz, Christoph J. O. Kaiser, Sven Klumpe, Dustin R. Morado, Matthias Poege, Jonathan Schneider, Florian Beck, David P. Klebl, Christopher Thompson & Jürgen M. Plitzko
Published in: Nature Methods, 2023, ISSN 1548-7105
Publisher: Nature Methods
DOI: 10.1038/s41592-023-02113-5

High Throughput Tomography (HiTT) on EMBL beamline P14 on PETRA III

Author(s): Albers, Jonas, Marina Nikolova, Angelika Svetlove, Nedal Darif, Matthew J. Lawson, Thomas R. Schneider, Yannick Schwab, Gleb Bourenkov, and Elizabeth Duke
Published in: Journal of Synchrotron Radiation, Issue Volume 3, Part 1, 2024, ISSN 1600-5775
Publisher: Journal of Synchrotron Radiation
DOI: 10.1107/S160057752300944X

Colour science with lasers, gummy bears, and rainbows (educational paper)

Author(s): Rute C. Félix, David Paleček, Teresa M. Correia
Published in: Science in School: The European Journal for Science Teachers Issue 66, Issue Issue 66, 2024, ISSN 0140-5284
Publisher: Science in School: The European Journal for Science Teachers
DOI: 10.5281/zenodo.10608950

Model-based deep learning framework for accelerated optical projection tomography

Author(s): Marcos Obando, Andrea Bassi, Nicolas Ducros, Germán Mato & Teresa M. Correia
Published in: Nature - Scientific Reports, Issue Article no. 21753 (2023), 2023, ISSN 2045-2322
Publisher: Nature Publishing Group
DOI: 10.1038/s41598-023-47650-3

Other (1)

EasyGrid: A versatile platform for automated cryo-EM sample preparation and quality control

Author(s): Olivier Gemin, Victor Armijo, Michael Hons, Caroline Bissardon, Romain Linares, Matthew W. Bowler, Georg Wolff,, Kirill Kovalev, Anastasiia Babenko, Veijo T. Salo, Sarah Schneider, Christopher Rossi, Léa Lecomte, Thibault Deckers, Kévin Lauzier, Robert Ja
Published in: BioRxiv, 2024, ISSN 2692-8205
Publisher: Biorxiv
DOI: 10.1101/2024.01.18.576170