Strengthening Environmental Surveillance to Advance Public Health Action

Projektinformationen

ODIN

ID Finanzhilfevereinbarung: 101103253

DOI

10.3030/101103253

EK-Unterschriftsdatum 2 Juni 2023

Startdatum 1 Juli 2023

Enddatum 30 Juni 2026

Finanziert unter

• Health

Gesamtkosten

€ 5 210 037,50

EU-Beitrag

€ 5 185 037,50

Koordiniert durch

LUNDS UNIVERSITET
Sweden

CORDIS bietet Links zu öffentlichen Ergebnissen und Veröffentlichungen von HORIZONT-Projekten.

Links zu Ergebnissen und Veröffentlichungen von RP7-Projekten sowie Links zu einigen Typen spezifischer Ergebnisse wie Datensätzen und Software werden dynamisch von OpenAIRE abgerufen.

Leistungen

Websites, patent fillings, videos etc. (5)

Launch project on website

The project will be launched on TGHN knowledge hub, with information and links to the project, participants, and contact information.

Knowledge Transfer Hub

An online knowledge transfer hub to support the community of practice (COP) convened in WP1, that tracks, measures and reports the successful uptake of the COP

Workshop platform

A package of workshops for stakeholders, students, and clinicians

Conference presentations

Conference presentations (e.g. EDCTP/CDC)First: M12Second: M24Third: M36

Activity reports of ODIN webpage and social media

Activity reports of ODIN webpage and social mediaFIrst: M12Second: M24Third: M36

Documents, reports (13)

Report of the existing surveillance and development needs in TZ, DRC, BF

Report of the existing infectious disease surveillance and development needs including potential of environmental surveillance actions in TZ, DRC, and BF.

Data generation processes integration

Report on integration with data generation processes, allowing data collection and submission from local data generators to a central data management system for integration.

Minutes of Annual Progress and SAB meetings

First meeting M13Second meeting M25Third meeting M36The minutes detail the agenda, participants, date, questions, as well as conclusions or decisions from the meetings.

Educational program review

Review of current existing material for education within bioinformatics and sequencing

Publications

Peer reviewed papers, newsletters and policy briefsFirst: M12Second: M24Third: M36

Dissemination and exploitation plan
Local data processing

Report on established local data processing and QC analysis to ensure data quality and efficient use of samples.

Webinar records describing processing pathways as training video. Laboratory handbook (SOPs) for mobile surveillance workflow transferred to Zenodo

Laboratory handbook that will contain standard operating procedures (SOPs) for mobile surveillance workflow will be published on Zenodo webpage (https://zenodo.org/). The laboratory handbook will include sampling methodology, selected DNA/RNA extraction methods and procedures on quantitative (qPCRs) and qualitative analysis (Oxford Nanopore sequencing). In the last phase of the project duration a final version of Laboratory handbook with updated SOPs protocols will be published. The same SOPs will be used as the basic for the preparation of webinars being published on the Cordis website or YouTube.

Sample pre-treatment SOP

Laboratory handbook (SOPs) for environmental surveillance in sub-Saharan countries. Pre-treatment of environmental samples, microbiological and molecular detection, quantification, and high-throughput sequence-based characterization.

Kick-off meeting report

A detailed summary with agenda, participants, and conclusions/objectives /follow-ups from the initial meeting.

Yearly status update on collaboration activities

Yearly status update on collaboration activities (12, 24, 36).

Environmental pathogen surveillance protocol in sub-Saharan countries

Report entailing the protocol proposal for environmental pathogen surveillance of selected infectious diseases in sub-Saharan countries.

Signing of a Collaboration Agreement

The collaboration within the Genomic Epidemiology Network will be governed by a Collaboration Agreement and membership will include all participating projects that are linked through Article 7 in their grant agreements, namely EpiGen Ethiopia, GenPath Africa, GREAT-LIFE, PANGenS, ODIN, NGS4PublicHealth.

Data Management Plan (1)

Consortium Data Management Plan

Data Management Plan detailing how to manage all the data generated, and how to share it between the consortium members and general audience.