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Unravelling the eukaryotic post-transcriptional regulatory code

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Nucleotide dependency analysis of genomic language models detects functional elements (opens in new window)

Author(s): Pedro Tomaz da Silva, Alexander Karollus, Johannes Hingerl, Gihanna Sta. Teresa Galindez, Nils Wagner, Xavier Hernandez-Alias, Danny Incarnato, Julien Gagneur
Published in: Nature Genetics, Issue 57, 2025, ISSN 1061-4036
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/S41588-025-02347-3

scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution (opens in new window)

Author(s): Johannes C. Hingerl; Laura D. Martens; Alexander Karollus; Trevor Manz; Jason D. Buenrostro; Fabian J. Theis; Julien Gagneur
Published in: bioRxiv, 2024, ISSN 2692-8205
Publisher: Cold Spring Harbor
DOI: 10.1101/2024.09.19.613754

Ribosomes modulate transcriptome abundance via generalized frameshift and out-of-frame mRNA decay (opens in new window)

Author(s): Yujie Zhang, Lilit Nersisyan, Eliska Fürst, Ioannis Alexopoulos, Carlos Santolaria, Susanne Huch, Claudio Bassot, Elena Garre, Per Sunnerhagen, Ilaria Piazza, Vicent Pelechano
Published in: Molecular Cell, Issue 85, 2025, ISSN 1097-2765
Publisher: Elsevier BV
DOI: 10.1016/J.MOLCEL.2025.04.022

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