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Investigating the role of in vivo RNA structure in RNA degradation

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Novel insights into the pervasive role of RNA structure in post-transcriptional regulation of gene expression in plants

Author(s): Huakun Zhang, Yiliang Ding
Published in: Biochem Soc Trans., Issue 49(4), 2021, Page(s) 1829–1839, ISSN 0300-5127
Publisher: Portland Press, Ltd.
DOI: 10.1042/bst20210318

Recent advances in RNA structurome

Author(s): Xu, B., Zhu, Y., Cao, C., Chen, H., Jin, Q., Li, G., Ma, J., Zhao, J., Zhu, J. & Ding, Y
Published in: Science China Life Sciences, 2022, ISSN 1674-7305
Publisher: Zhongguo Kexue Zazhishe/Science in China Press
DOI: 10.1007/s11427-021-2116-2

G-quadruplex structures trigger RNA phase separation

Author(s): Yueying Zhang, Minglei Yang, Susan Duncan, Xiaofei Yang, Mahmoud A S Abdelhamid, Lin Huang, Huakun Zhang, Philip N Benfey, Zoë A E Waller, Yiliang Ding
Published in: Nucleic Acids Research, Issue 2019, 2019, Page(s) 11746-11754, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkz978

The Simultaneous Coupling of Transcription and Splicing in Plants

Author(s): Yueying Zhang, Yiliang Ding
Published in: Molecular Plant, Issue 13/2, 2020, Page(s) 184-186, ISSN 1674-2052
Publisher: Oxford University Press
DOI: 10.1016/j.molp.2020.01.011

Deep Learning in RNA Structure Studies

Author(s): Yu, H., Qi, Y. & Ding, Y
Published in: Frontiers in Molecular Biosciences, Issue 9, 2022, ISSN 2296-889X
Publisher: Frontiers Media
DOI: 10.3389/fmolb.2022.869601

In vivo nuclear RNA structurome reveals RNA-structure regulation of mRNA processing in plants

Author(s): Zhenshan Liu, Qi Liu, Xiaofei Yang, Yueying Zhang, Matthew Norris, Xiaoxi Chen, Jitender Cheema, Huakun Zhang, Yiliang Ding
Published in: Genome Biology, Issue 22, 2021, ISSN 1474-760X
Publisher: BMC
DOI: 10.1186/s13059-020-02236-4

RNA G-quadruplex structures exist and function in vivo in plants

Author(s): Xiaofei Yang; Jitender Cheema; Yueying Zhang; Hongjing Deng; Hongjing Deng; Susan Duncan; Mubarak I. Umar; Jieyu Zhao; Qi Liu; Qi Liu; Xiaofeng Cao; Chun Kit Kwok; Yiliang Ding
Published in: Genome Biology, Issue 21, 2020, ISSN 1474-760X
Publisher: BioMed Central
DOI: 10.1186/s13059-020-02142-9

Intact RNA structurome reveals mRNA structure-mediated regulation of miRNA cleavage in vivo

Author(s): Minglei Yang, Hugh C Woolfenden, Yueying Zhang, Xiaofeng Fang, Qi Liu, Maria L Vigh, Jitender Cheema, Xiaofei Yang, Matthew Norris, Sha Yu, Alberto Carbonell, Peter Brodersen, Jiawei Wang, Yiliang Ding
Published in: Nucleic Acids Research, Issue 48(15), 2020, Page(s) 8767–8781, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkaa577

RNA G-quadruplex structure contributes to cold adaptation in plants

Author(s): Xiaofei Yang, Haopeng Yu, Susan Duncan, Yueying Zhang, Jitender Cheema, J. Benjamin Miller, Jie Zhang, Chun Kit Kwok, Huakun Zhang, Yiliang Ding
Published in: bioRxiv, 2022, ISSN 2692-8205
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2022.03.04.482910

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