Deliverables
Progress report
Coherent view of the project goals, methods and schedulesCoherent view of the project goals, methods and schedules among all project participants.
Progress report 2Progress report
Publishing and dissemination of resultsDat on curvature-dependent potentials of mean force for drug translocation through the membrane.
Empirical force fields of the drugsWorking files of empirical force fields of the drugs.
Experimental markers of conformation changes in membrane-protein and membrane-drug complexes.Data on experimental markers of conformation changes in membrane-protein and membrane-drug complexes.
Mid-term meetingThere will be only one mid-term meeting per project with timing between month 14 and 24. Definitive date is to be confirmed by the coordinator and preferably linked to a consortium event.
Comparison of experimental and simulation resultsConsistent view of the curvature- and asymmetry-induced phenomena in the membranes from experimental and simulation perspectives
Curvature-dependent conformational changes of the membrane proteinsData on curvature-dependent conformational changes of the membrane proteins
Publications
Author(s):
Semen O. Yesylevskyy, Timothée Rivel, Christophe Ramseyer
Published in:
Scientific Reports, Issue 7/1, 2017, ISSN 2045-2322
Publisher:
Nature Publishing Group
DOI:
10.1038/s41598-017-16450-x
Author(s):
Semen O. Yesylevskyy, Christophe Ramseyer, Mariia Savenko, Simona Mura, Patrick Couvreur
Published in:
Molecular Pharmaceutics, 2018, ISSN 1543-8384
Publisher:
American Chemical Society
DOI:
10.1021/acs.molpharmaceut.7b00952
Author(s):
O. P. Gnatyuk, G. I. Dovbeshko, A. Yershov, S. O. Karakhim, O. Ilchenko, O. Yu. Posudievsky
Published in:
RSC Advances, Issue 8/53, 2018, Page(s) 30404-30411, ISSN 2046-2069
Publisher:
Royal Society of Chemistry
DOI:
10.1039/c8ra05085f
Author(s):
Kyrylo A. Pyrshev, Semen O. Yesylevskyy, Alexander P. Demchenko
Published in:
Biochemical and Biophysical Research Communications, Issue 508/4, 2019, Page(s) 1139-1144, ISSN 0006-291X
Publisher:
Academic Press
DOI:
10.1016/j.bbrc.2018.12.054
Author(s):
Lei Zheng, Yibin Lin, Shuo Lu, Jiazhe Zhang, Mikhail Bogdanov
Published in:
Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids, Issue 1862/11, 2017, Page(s) 1404-1413, ISSN 1388-1981
Publisher:
Elsevier BV
DOI:
10.1016/j.bbalip.2016.11.015
Author(s):
Yibin Lin, Mikhail Bogdanov, Shuo Lu, Ziqiang Guan, William Margolin, Jerrold Weiss, Lei Zheng
Published in:
Journal of Biological Chemistry, Issue 293/9, 2018, Page(s) 3386-3398, ISSN 0021-9258
Publisher:
American Society for Biochemistry and Molecular Biology Inc.
DOI:
10.1074/jbc.ra117.001231
Author(s):
Ludmila Davydova, Svetlana Bakholdina, Maria Barkina, Peter Velansky, Mikhail Bogdanov, Nina Sanina
Published in:
Biochimie, Issue 123, 2016, Page(s) 103-109, ISSN 0300-9084
Publisher:
Elsevier BV
DOI:
10.1016/j.biochi.2016.02.004
Author(s):
Timothée Rivel, Semen O. Yesylevskyy, Christophe Ramseyer
Published in:
Carbon, Issue 118, 2017, Page(s) 358-369, ISSN 0008-6223
Publisher:
Pergamon Press Ltd.
DOI:
10.1016/j.carbon.2017.03.072
Author(s):
Julie Mougin, Semen O. Yesylevskyy, Claudie Bourgaux, David Chapron, Jean-Philippe Michel, Franco Dosio, Barbara Stella, Christophe Ramseyer, Patrick Couvreur
Published in:
ACS Nano, Issue 13/11, 2019, Page(s) 12870-12879, ISSN 1936-0851
Publisher:
American Chemical Society
DOI:
10.1021/acsnano.9b05303
Author(s):
Thibault Minervini, Bruno Cardey, Sarah Foley, Christophe Ramseyer, Mironel Enescu
Published in:
Metallomics, Issue 11/4, 2019, Page(s) 833-844, ISSN 1756-5901
Publisher:
Royal Society of Chemistry
DOI:
10.1039/c8mt00371h
Author(s):
Timothée Rivel, Christophe Ramseyer, Semen Yesylevskyy
Published in:
Scientific Reports, Issue 9/1, 2019, ISSN 2045-2322
Publisher:
Nature Publishing Group
DOI:
10.1038/s41598-019-41903-w
Author(s):
Semen Yesylevskyy, Timothée Rivel, Christophe Ramseyer
Published in:
Scientific Reports, Issue 9/1, 2019, ISSN 2045-2322
Publisher:
Nature Publishing Group
DOI:
10.1038/s41598-019-53952-2
Author(s):
Arnaud Peramo, Simona Mura, Semen O. Yesylevskyy, Bruno Cardey, Dunja Sobot, Stephanie Denis, Christophe Ramseyer, Didier Desmaële, Patrick Couvreur
Published in:
Comptes Rendus Chimie, Issue 21/10, 2018, Page(s) 974-986, ISSN 1631-0748
Publisher:
Elsevier Masson
DOI:
10.1016/j.crci.2018.02.008
Author(s):
Dunja Sobot, Simona Mura, Semen O. Yesylevskyy, Laura Dalbin, Fanny Cayre, Guillaume Bort, Julie Mougin, Didier Desmaële, Sinda Lepetre-Mouelhi, Grégory Pieters, Bohdan Andreiuk, Andrey S. Klymchenko, Jean-Louis Paul, Christophe Ramseyer, Patrick Couvreur
Published in:
Nature Communications, Issue 8, 2017, Page(s) 15678, ISSN 2041-1723
Publisher:
Nature Publishing Group
DOI:
10.1038/ncomms15678
Author(s):
Arvi Freiberg, Manoop Chenchiliyan, Margus Rätsep, Kõu Timpmann
Published in:
Biochimica et Biophysica Acta (BBA) - Bioenergetics, Issue 1857/11, 2016, Page(s) 1727-1733, ISSN 0005-2728
Publisher:
Elsevier BV
DOI:
10.1016/j.bbabio.2016.08.001
Author(s):
Liina Kangur, Michael R. Jones, Arvi Freiberg
Published in:
Biophysical Chemistry, 2017, ISSN 0301-4622
Publisher:
Elsevier BV
DOI:
10.1016/j.bpc.2017.04.003
Author(s):
Kõu Timpmann, Liina Kangur, Ants Lõhmus, Arvi Freiberg
Published in:
Journal of Physics B: Atomic, Molecular and Optical Physics, Issue 50/14, 2017, Page(s) 144006, ISSN 0953-4075
Publisher:
Institute of Physics Publishing
DOI:
10.1088/1361-6455/aa77e4
Author(s):
Manoop Chenchiliyan, Kõu Timpmann, Erko Jalviste, Peter G. Adams, C. Neil Hunter, Arvi Freiberg
Published in:
Biochimica et Biophysica Acta (BBA) - Bioenergetics, Issue 1857/6, 2016, Page(s) 634-642, ISSN 0005-2728
Publisher:
Elsevier BV
DOI:
10.1016/j.bbabio.2016.03.020
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