Bacterial isoprene metabolism: a missing link in a key global biogeochemical cycle

Project Information

IsoMet

Grant agreement ID: 694578

DOI

10.3030/694578

Project closed

EC signature date 31 May 2016

Start date 1 November 2016

End date 31 December 2022

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 2 494 693,00

EU contribution

€ 2 494 693,00

Coordinated by

UNIVERSITY OF EAST ANGLIA
United Kingdom

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (21)

‘Omics-guided prediction of the pathway for metabolism of isoprene by Variovorax sp. WS11

Author(s): Dawson, R.A., Rix, G.D., Crombie, A.T and Murrell, J.C.
Published in: Environmental Microbiology, Issue 24 (11), 2023, Page(s) 5151-5164, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.16149

Isoprene-Degrading Bacteria from Soils Associated with Tropical Economic Crops and Framework Forest Trees

Author(s): Toungporn Uttarotai, Boyd A. McKew, Farid Benyahia, J. Colin Murrell, Wuttichai Mhuantong, Sunanta Wangkarn, Thararat Chitov, Sakunnee Bovonsombut, Terry J. McGenity
Published in: Microorganisms, Issue 9/5, 2021, Page(s) 1024, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms9051024

Identification of active gaseous alkane degraders at natural gas seeps

Author(s): Ul Haque, M.F.,Hernández, M., Crombie, A.T. and Murrell, J.C.
Published in: The ISME Journal, Issue 16, 2022, Page(s) 1705-1716, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-022-01211-0

Sphingopyxis sp. Strain OPL5, an Isoprene-Degrading Bacterium from the Sphingomonadaceae Family Isolated from Oil Palm Leaves

Author(s): Nasmille L. Larke-Mejía, Ornella Carrión, Andrew T. Crombie, Terry J. McGenity, J. Colin Murrell
Published in: Microorganisms, Issue 8/10, 2020, Page(s) 1557, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms8101557

Isoprene-degrading bacteria associated with the phyllosphere of Salix fragilis, a high isoprene-emitting willow of the northern hemisphere

Author(s): Gibson, L., Crombie, A.T., McNamara, N.P. and Murrell, J.C.
Published in: Environmental Microbiome, Issue 16 (1), 2021, Page(s) 1-13, ISSN 2524-6372
Publisher: MDPI
DOI: 10.1186/s40793-021-00386-x

Draft Genome Sequences of Three Terrestrial Isoprene-Degrading Rhodococcus Strains

Author(s): Andrew T. Crombie, Helen Emery, Terry J. McGenity, J. Colin Murrell
Published in: Genome Announcements, Issue 5/45, 2017, Page(s) e01256-17, ISSN 2169-8287
Publisher: American Society of Microbiology
DOI: 10.1128/genomeA.01256-17

Microbial cycling of isoprene, the most abundantly produced biological volatile organic compound on Earth

Author(s): Terry J. McGenity, Andrew T. Crombie, J. Colin Murrell
Published in: The ISME Journal, 2018, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-018-0072-6

Identification and characterisation of isoprene-degrading bacteria in an estuarine environment

Author(s): Antonia Johnston, Andrew T. Crombie, Myriam El Khawand, Leanne Sims, Gregg M. Whited, Terry J. McGenity, J. Colin Murrell
Published in: Environmental Microbiology, Issue 19/9, 2017, Page(s) 3526-3537, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.13842

Gene probing reveals the widespread distribution, diversity and abundance of isoprene-degrading bacteria in the environment

Author(s): Ornella Carrión, Nasmille L. Larke-Mejía, Lisa Gibson, Muhammad Farhan Ul Haque, Javier Ramiro-García, Terry J. McGenity, J. Colin Murrell
Published in: Microbiome, Issue 6/1, 2018, ISSN 2049-2618
Publisher: Springer Nature
DOI: 10.1186/s40168-018-0607-0

Poplar phyllosphere harbors disparate isoprene-degrading bacteria

Author(s): Andrew T. Crombie, Nasmille L. Larke-Mejia, Helen Emery, Robin Dawson, Jennifer Pratscher, Gordon P. Murphy, Terry J. McGenity, J. Colin Murrell
Published in: Proceedings of the National Academy of Sciences, Issue 115/51, 2018, Page(s) 13081-13086, ISSN 0027-8424
Publisher: National Academy of Sciences
DOI: 10.1073/pnas.1812668115

Novel Isoprene-Degrading Proteobacteria From Soil and Leaves Identified by Cultivation and Metagenomics Analysis of Stable Isotope Probing Experiments

Author(s): Nasmille L. Larke-Mejía, Andrew T. Crombie, Jennifer Pratscher, Terry J. McGenity, J. Colin Murrell
Published in: Frontiers in Microbiology, Issue 10, 2019, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2019.02700

Isoprene Oxidation by the Gram-Negative Model bacterium Variovorax sp. WS11

Author(s): Robin A. Dawson, Nasmille L. Larke-Mejía, Andrew T. Crombie, Muhammad Farhan Ul Haque, J. Colin Murrell
Published in: Microorganisms, Issue 8/3, 2020, Page(s) 349, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms8030349

Diversity of isoprene-degrading bacteria in phyllosphere and soil communities from a high isoprene-emitting environment: a Malaysian oil palm plantation

Author(s): Ornella Carrión, Lisa Gibson, Dafydd M. O. Elias, Niall P. McNamara, Theo A. van Alen, Huub J. M. Op den Camp, Christina Vimala Supramaniam, Terry J. McGenity, J. Colin Murrell
Published in: Microbiome, Issue 8/1, 2020, ISSN 2049-2618
Publisher: Springer-Nature
DOI: 10.1186/s40168-020-00860-7

Molecular Ecology of Isoprene-Degrading Bacteria

Author(s): Ornella Carrión, Terry J. McGenity, J. Colin Murrell
Published in: Microorganisms, Issue 8/7, 2020, Page(s) 967, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms8070967

Complete Genome of Isoprene Degrading Nocardioides sp. WS12

Author(s): Lisa Gibson, Nasmille L. Larke-Mejía, J. Colin Murrell
Published in: Microorganisms, Issue 8/6, 2020, Page(s) 889, ISSN 2076-2607
Publisher: MDPI
DOI: 10.3390/microorganisms8060889

Microbial metabolism of isoprene: a much-neglected climate-active gas

Author(s): J. Colin Murrell, Terry J. McGenity, Andrew T. Crombie
Published in: Microbiology, Issue May 2020, 2020, Page(s) 1-14, ISSN 1350-0872
Publisher: Society for General Microbiology
DOI: 10.1099/mic.0.000931

Identification of isoprene-degrading bacteria in phyllosphere and soil communities from high isoprene-emitting oil palm trees by DNA-stable isotope probing

Author(s): Ornella Carrión, Lisa Gibson, Dafydd M.O. Elias, Niall P. McNamara, Theo A. van Alen, Huub J.M. Op den Camp, Christina Vimala Supramaniam, J. Colin Murrell
Published in: Access Microbiology, Issue 2/7A, 2020, ISSN 2516-8290
Publisher: Microbiology Society
DOI: 10.1099/acmi.ac2020.po0460

The microbiology of isoprene cycling in aquatic ecosystems

Author(s): RA Dawson, AT Crombie, P Pichon, M Steinke, TJ McGenity, JC Murrell
Published in: Aquatic Microbial Ecology, 2021, ISSN 0948-3055
Publisher: Inter-Research Science Publishing
DOI: 10.3354/ame01972

Peering down the sink: a review of isoprene metabolism by bacteria

Author(s): Dawson, R.A., Crombie, A.T Jansen, R. S., Smith, T.J., Nichol, T. and Murrell, J.C.
Published in: Environmental Mirobiology, Issue 25, 2022, Page(s) 1-14, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.16325

Genome characterisation of an isoprene-degrading Alcaligenes sp. isolated from a tropical restored forest

Author(s): Uttarotai, T.; Sutheeworapong, S.; Crombie, A.T.; Murrell, C.; Mhuantong, W.; Noirungsee, N.; Wangkarn, S.; Bovonsombut, S.; McGenity, T.J.; Chitov, T.
Published in: Biology, Issue 11 (4), 2022, Page(s) 519, ISSN 2079-7737
Publisher: MDPI
DOI: 10.3390/biology11040519

Purification and characterisation of the isoprene monooxygenase from Rhodococcus sp. AD45

Author(s): Sims, LP; Lockwood, CWJ; Crombie, AT; Bradley, JM; Le Brun, NE; Murrell, JC
Published in: Applied and Environmental Microbiology, Issue 88 (7), 2022, Page(s) e00029-22, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.00029-22

Other (1)

Oil palm soil helps degrade environmental isoprene

Author(s): Ornella Carrion, Lisa Gibson, Dafydd Elias, Niall McNamara, Theo van Alen, Huub Op den Camp, Christina Supramaniam, Terry McGenity, Colin Murrell
Published in: Research Square, Issue Video, 2020
Publisher: MDPI

Book chapters (2)

Genetics and Ecology of Isoprene Degradation

Author(s): Andrew T. Crombie, Nasmille L. Mejia-Florez, Terry J. McGenity, J. Colin Murrell
Published in: Aerobic Utilization of Hydrocarbons, Oils and Lipids. Handbook of Hydrocarbon and Lipid Microbiology, Issue 2018, 2018, Page(s) 1-15, ISBN 978-3-319-39782-5
Publisher: Springer International Publishing
DOI: 10.1007/978-3-319-39782-5_27-1

DNA-, RNA-, and Protein-based stable-isotope probing for high-throughput biomarker analysis of active microorganisms

Author(s): Jameson, E., Taubert, M., Angel, R., Coyotzi, S., Chen, Y., Eyice, O., Schäfer, H., Murrell, J.C., Neufeld, J.D. and Dumont, M.G
Published in: Metagenomics, 2022, Page(s) 261-282, ISSN 1940-6029
Publisher: Humana Press, New York
DOI: 10.1007/978-1-0716-2795-2