Pubblicazioni Peer reviewed articles (20) Gasdermin D independent canonical inflammasome responses cooperate with caspase-8 to establish host defense against gastrointestinal Citrobacter rodentium infection Autori: Elien Eeckhout, Lisa Hamerlinck, Veronique Jonckheere, Petra Van Damme, Geert van Loo, Andy Wullaert Pubblicato in: Cell Death & Disease, 2023, ISSN 2041-4889 Editore: Nature Publishing Group DOI: 10.1038/s41419-023-05801-4 Use of Hybrid Data-Dependent and -Independent Acquisition Spectral Libraries Empowers Dual-Proteome Profiling Autori: Patrick Willems, Ursula Fels, An Staes, Kris Gevaert, Petra Van Damme Pubblicato in: Journal of Proteome Research, Numero 20/2, 2021, Pagina/e 1165-1177, ISSN 1535-3893 Editore: American Chemical Society DOI: 10.1021/acs.jproteome.0c00350 Rhizogenic Agrobacterium protein RolB interacts with the TOPLESS repressor proteins to reprogram plant immunity and development Autori: Lore Gryffroy; Evi Ceulemans; Nicolás Manosalva Pérez; Jhon Venegas-Molina; Ana Cristina Jaramillo-Madrid; Savio D. Rodrigues; Liesbeth De Milde; Veronique Jonckheere; Marc Van Montagu; Barbara De Coninck; Klaas Vandepoele; Petra Van Damme; Alain Goossens Pubblicato in: Proceedings of the National Academy of Sciences of the United States of America, Numero 3, 2023, ISSN 0027-8424 Editore: National Academy of Sciences DOI: 10.1073/pnas.2210300120 Recent Advancements in Tracking Bacterial Effector Protein Translocation Autori: Julie Braet, Dominiek Catteeuw, Petra Van Damme Pubblicato in: Microorganisms, 2022, ISSN 2076-2607 Editore: MDPI DOI: 10.3390/microorganisms10020260 Lost and Found: Re-searching and Re-scoring Proteomics Data Aids Genome Annotation and Improves Proteome Coverage Autori: Patrick Willems, Igor Fijalkowski, Petra Van Damme Pubblicato in: mSystems, Numero 5/5, 2020, ISSN 2379-5077 Editore: American Society for Microbiology DOI: 10.1128/msystems.00833-20 Expanded in vivo substrate profile of the yeast N-terminal acetyltransferase NatC Autori: Petra Van Damme; Camilla Osberg; Veronique Jonckheere; Nina Glomnes; Kris Gevaert; Thomas Arnesen; Henriette Aksnes Pubblicato in: Journal of Biological Chemistry, Numero 4, 2023, ISSN 0021-9258 Editore: American Society for Biochemistry and Molecular Biology Inc. DOI: 10.1016/j.jbc.2022.102824 Hidden in plain sight : challenges in proteomics detection of small ORF-encoded polypeptides Autori: Igor Fijalkowski; Patrick Willems; Veronique Jonckheere; Laure Simoens; Petra Van Damme Pubblicato in: microLife, Numero 2, 2022, ISSN 2633-6693 Editore: Oxford University Press DOI: 10.1093/femsml/uqac005 Keeping in Touch with Type-III Secretion System Effectors: Mass Spectrometry-Based Proteomics to Study Effector–Host Protein–Protein Interactions Autori: Margaux De Meyer, Joren De Ryck, Sofie Goormachtig, Petra Van Damme Pubblicato in: International Journal of Molecular Sciences, Numero 21/18, 2020, Pagina/e 6891, ISSN 1422-0067 Editore: Multidisciplinary Digital Publishing Institute (MDPI) DOI: 10.3390/ijms21186891 From prediction to function : current practices and challenges towards the functional characterization of type III effectors Autori: Joren De Ryck; Petra Van Damme; Sofie Goormachtig Pubblicato in: Frontiers in Microbiology, Numero 5, 2023, ISSN 1664-302X Editore: Frontiers Media DOI: 10.3389/fmicb.2023.1113442 Capturing Salmonella SspH2 Host Targets in Virus-Like Particles Autori: Margaux De Meyer, Igor Fijalkowski, Veronique Jonckheere, Delphine De Sutter, Sven Eyckerman, Petra Van Damme Pubblicato in: Frontiers in Medicine, Numero 8, 2021, ISSN 2296-858X Editore: Lausanne: Frontiers Media S.A., 2014- DOI: 10.3389/fmed.2021.725072 To New Beginnings: Riboproteogenomics Discovery of N-Terminal Proteoforms in Arabidopsis Thaliana Autori: Patrick Willems, Elvis Ndah, Veronique Jonckheere, Frank Van Breusegem, Petra Van Damme Pubblicato in: Frontiers in Plant Science, 2022, ISSN 1664-462X Editore: Frontiers Media S. A. DOI: 10.3389/fpls.2021.778804 Establishment of Proximity-dependent Biotinylation Approaches in Different Plant Model Systems Autori: Deepanksha Arora, Nikolaj B. Abel, Chen Liu, Petra Van Damme, Klaas Yperman, Dominique Eeckhout, Lam Dai Vu, Jie Wang, Anna Tornkvist, Francis Impens, Barbara Korbei, Jelle Van Leene, Alain Goossens, Geert De Jaeger, Thomas Ott, Panagiotis Nikolaou Moschou, Daniel Van Damme Pubblicato in: The Plant Cell, 2020, Pagina/e tpc.00235.2020, ISSN 1040-4651 Editore: American Society of Plant Biologists DOI: 10.1105/tpc.20.00235 Seeking the interspecies crosswalk for filamentous microbe effectors Autori: Naomi Stuer, Petra Van Damme, Sofie Goormachtig, Judith Van Dingenen Pubblicato in: Trends in Plant Science, 2023, ISSN 1360-1385 Editore: Elsevier BV DOI: 10.1016/j.tplants.2023.03.017 Shift in vacuolar to cytosolic regime of infecting Salmonella from a dual proteome perspective Autori: Ursula Fels, Patrick Willems, Margaux De Meyer, Kris Gevaert, Petra Van Damme Pubblicato in: PLoS Pathogens, 2023, ISSN 1553-7366 Editore: Public Library of Science DOI: 10.1371/journal.ppat.1011183 PROTEOFORMER 2.0: further developments in the ribosome profiling-assisted proteogenomic hunt for new proteoforms Autori: Steven Verbruggen, Elvis Ndah, Wim Van Criekinge, Siegfried Gessulat, Bernhard Kuster, Mathias Wilhelm, Petra Van Damme, Gerben Menschaert Pubblicato in: Molecular & Cellular Proteomics, 2019, Pagina/e mcp.RA118.001218, ISSN 1535-9476 Editore: American Society for Biochemistry and Molecular Biology Inc. DOI: 10.1074/mcp.ra118.001218 Bacterial riboproteogenomics: the era of N-terminal proteoform existence revealed Autori: Daria Fijalkowska, Igor Fijalkowski, Patrick Willems, Petra Van Damme Pubblicato in: FEMS Microbiology Reviews, 2020, ISSN 1574-6976 Editore: Oxford academic DOI: 10.1093/femsre/fuaa013 Small Protein Enrichment Improves Proteomics Detection of sORF Encoded Polypeptides Autori: Igor Fijalkowski, Marlies Peeters, Petra Van Damme Pubblicato in: Frontiers in Genetics, 2021, ISSN 1664-8021 Editore: Frontiers Media DOI: 10.3389/fgene.2021.713400 Exposing the small protein load of bacterial life Autori: Laure Simoens, Igor Fijalkowski, Petra Van Damme Pubblicato in: FEMS Microbiology Reviews, 2023, ISSN 0168-6445 Editore: Blackwell DOI: 10.1093/femsre/fuad063 Selective ribosome profiling reveals a role for SecB in the co-translational inner membrane protein biogenesis Autori: Lena Eismann; Igor Fijalkowski; Carla Verónica Galmozzi; Jiří Koubek; Frank Tippmann; Petra Van Damme; Günter Kramer Pubblicato in: Cell Reports, Numero 7, 2022, ISSN 2211-1247 Editore: Cell Press DOI: 10.1016/j.celrep.2022.111776 Bacterial Genetic Engineering by Means of Recombineering for Reverse Genetics Autori: Ursula Fels, Kris Gevaert, Petra Van Damme Pubblicato in: Frontiers in Microbiology, Numero 11, 2020, ISSN 1664-302X Editore: Frontiers Media DOI: 10.3389/fmicb.2020.548410 Other (3) The use of hybrid data-dependent and -independent acquisition spectral libraries empower dual-proteome profiling Autori: Patrick Willems, Ursula Fels, An Staes, Kris Gevaert, Petra Van Damme Pubblicato in: bioRxiv, 2020 Editore: bioRxiv preprint server for biology DOI: 10.1101/2020.05.24.113340 Lost and found: re-searching and re-scoring proteomics data aids the discovery of bacterial proteins and improves proteome coverage Autori: Patrick Willems, Igor Fijalkowski, Petra Van Damme Pubblicato in: bioRxiv, 2019 Editore: bioRxiv preprint server for biology DOI: 10.1101/2019.12.18.881375 Establishment of Proximity-dependent Biotinylation Approaches in Different Plant Model Systems Autori: Deepanksha Arora, Nikolaj B. Abel, Chen Liu, Petra Van Damme, Klaas Yperman, Lam Dai Vu, Jie Wang, Anna Tornkvist, Francis Impens, Barbara Korbei, Dominique Eeckhout, Jelle Van Leene, VAlain Goossens, Geert De Jaeger,Thomas Ott, Panagiotis Moschou, Daniël Van Damme Pubblicato in: bioRxiv, 2020 Editore: bioRxiv preprint server for biology DOI: 10.1101/701425 È in corso la ricerca di dati su OpenAIRE... Si è verificato un errore durante la ricerca dei dati su OpenAIRE Nessun risultato disponibile
