Past, present and future of turbid reefs in the Coral Triangle

Información del proyecto

4D_REEF

Identificador del acuerdo de subvención: 813360

DOI

10.3030/813360

Proyecto cerrado

Fecha de la firma de la CE 6 Mayo 2019

Fecha de inicio 1 Septiembre 2019

Fecha de finalización 29 Febrero 2024

Financiado con arreglo a

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Coste total

€ 4 039 155,72

Aportación de la UE

€ 4 039 155,72

Coordinado por

STICHTING NATURALIS BIODIVERSITY CENTER
Netherlands

CORDIS proporciona enlaces a los documentos públicos y las publicaciones de los proyectos de los programas marco HORIZONTE.

Los enlaces a los documentos y las publicaciones de los proyectos del Séptimo Programa Marco, así como los enlaces a algunos tipos de resultados específicos, como conjuntos de datos y «software», se obtienen dinámicamente de OpenAIRE .

Resultado final

Other (4)

Each ESR has presented results at 2 international conferences

Scientific deliverable - Each ESR has presented results at 2 international conferences

Topical session at European Geoscience Union

D2 Topical session at the Asia Pacific Coral Reef Symposium

Award ceremony for best 3 minute video, blog entry, research paper, and visualisation

D4 Award ceremony for best 3 minute video, blog entry, research paper, and visualisation

Each ESR has published at least 2 blogs

D3 Each ESR has published at least 2 blogs

Open Research Data Pilot (1)

All datasets published in suitable repositories

Scientific deliverable - All datasets published in suitable repositories

Documents, reports (1)

Each ESR published at least 1 first authored and 2 co-authored publications

Scientific deliverable - Each ESR published at least 1 first authored and 2 co-authored publications

Websites, patent fillings, videos etc. (1)

4D-REEF website operative

The website for 4D-REEF website is in operation.

Publicaciones

Peer reviewed articles (24)

High diversity of benthic cyanobacterial mats on coral reefs of Koh Tao, Gulf of Thailand

Autores: Stuij, T. M., Cleary, D. F., Gomes, N. C.M., Mehrotra, R., Visser, P. M., Speksnijder, A. G., and Hoeksema, B. W.
Publicado en: Coral Reefs, 2023, ISSN 0722-4028
Editor: Springer Verlag
DOI: 10.1007/s00338-022-02304-0

Single-Cell Genomics Reveals the Divergent Mitochondrial Genomes of Retaria (Foraminifera and Radiolaria)

Autores: Macher, J.-N., Coots, N.L., Poh, Y.-P., Girard, E.B., Langerak, A., Muñoz-Gómez, S.A., Sinha, S.D., Jirsová, D., Vos, R., Wissels, R., Gile, G.H., Renema, W., Wideman, J.G.
Publicado en: MBio, Edición 14, 2023, Página(s) e0030223, ISSN 2150-7511
Editor: American Society for Microbiology
DOI: 10.1128/mbio.00302-23

Is the Coral Triangle’s future shown in a Pliocene reef gap?

Autores: Harrison, G.W.M., Santodomingo, N., Johnson, K.G. Renema, W.
Publicado en: Coral Reefs, Edición 42, 2023, Página(s) 1219–1225, ISSN 1432-0975
Editor: Springer
DOI: 10.1007/s00338-023-02412-5

Exploring Prokaryotic Communities in the Guts and Mucus of Nudibranchs, and Their Similarity to Sediment and Seawater Microbiomes

Autores: Tamara Stuij, Daniel F. R. Cleary, Ana R. M. Polónia, Sumaitt Putchakarn, Ana C. C. Pires, Newton C. M. Gomes & Nicole J. de Voogd
Publicado en: Current Microbiology, Edición 80, 2023, ISSN 0343-8651
Editor: Springer Verlag
DOI: 10.1007/s00284-023-03397-8

Impacts of humic substances, elevated temperature, and UVB radiation on bacterial communities of the marine sponge Chondrilla sp

Autores: Tamara M Stuij, Daniel F R Cleary, Rui J M Rocha, Ana R M Polónia, Davide A M Silva, Antonio Louvado, Nicole J de Voogd, Newton C M Gomes
Publicado en: FEMS Microbiology Ecology, Edición 100/3, 2024, ISSN 0168-6496
Editor: Blackwell
DOI: 10.1093/femsec/fiae022

The hydrological cycle and ocean circulation of the Maritime Continent in the Pliocene: results from PlioMIP2

Autores: Ren, X., Lunt, D. J., Hendy, E., von der Heydt, A., Abe-Ouchi, A., Otto-Bliesner, B., Williams, C. J. R., Stepanek, C., Guo, C., Chandan, D., Lohmann, G., Tindall, J. C., Sohl, L. E., Chandler, M. A., Kageyama, M., Baatsen, M. L. J., Tan, N., Zhang, Q., Feng, R., Hunter, S., Chan, W.-L., Peltier, W. R., Li, X., Kamae, Y., Zhang, Z., and Haywood, A. M.
Publicado en: Climate of the Past, Edición 19, 2023, Página(s) 2053-2077, ISSN 1814-9332
Editor: Gottingen Copernicus Publishers
DOI: 10.5194/cp-19-2053-2023,2023

Dynamics of large benthic foraminiferal assemblages: A tool to foreshadow reef degradation?

Autores: Girard, E.B., Estradivari, Ferse, S., Ambo-Rappe, R., Jompa, J., Renema, W.
Publicado en: Science of the Total Environment, Edición 811, 2022, Página(s) 151396, ISSN 1879-1026
Editor: Elsevier
DOI: 10.1016/j.scitotenv.2021.151396

Limited Progress in Improving Gender and Geographic Representation in Coral Reef Science

Autores: Gabby N. Ahmadia, Samantha H. Cheng, Dominic A. Andradi-Brown, Stacy K. Baez, Megan D. Barnes, Nathan J. Bennett, Stuart J. Campbell, Emily S. Darling, Estradivari, David Gill, Erika Gress, Georgina G. Gurney, Vera Horigue, Raymond Jakub, Emma V. Kennedy, Shauna L. Mahajan, Sangeeta Mangubhai, Shayle B. Matsuda, Nyawira A. Muthiga, Michael O. Navarro, Nadia Santodomingo, Henri Vallès, Laura Veve
Publicado en: Frontiers in Marine Science, Edición 8, 2021, ISSN 2296-7745
Editor: Frontiers Media
DOI: 10.3389/fmars.2021.731037

Seeing the Forest for the Trees: Mapping Cover and Counting Trees from Aerial Images of a Mangrove Forest Using Artificial Intelligence

Autores: Schürholz D, Castellanos-Galindo GA, Casella E, Mejía-Rentería JC, Chennu A
Publicado en: Remote Sensing, Edición 15, 2023, Página(s) 3334, ISSN 2072-4292
Editor: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/rs15133334

Hynes, M.G., O’Dea, A., Webster, J.M. and Renema, W., 2024. RADReef: A global Holocene Reef Rate of Accretion Dataset. Scientific Data, 11(1), p.398.

Autores: Hynes, M.G., O’Dea, A., Webster, J.M. and Renema, W
Publicado en: Scientific Data, Edición 11, 2024, Página(s) 398, ISSN 2052-4463
Editor: Springer
DOI: 10.1038/s41597-024-03228-w

Watching out for coral reefs with forams

Autores: Elsa B Girard Willem Renema
Publicado en: Frontiers for Young Minds, Edición 12, 2024, Página(s) 1122119, ISSN 2296-6846
Editor: Frontiers
DOI: 10.3389/frym.2024.1122119

Marine conservation beyond MPAs: Towards the recognition of other effective area-based conservation measures (OECMs) in Indonesia.

Autores: Estradivari, Agung, Muh Firdaus Adhuri, Dedi Supriadi Ferse, Sebastian C. A. Sualia, Ita Andradi-Brown, Dominic A. Campbell, Stuart J. Iqbal, Mohamad Jonas, Harry D. Lazuardi, Muhammad Erdi Nanlohy, Hellen Pakiding, Fitryanti Pusparini, Ni Kadek Sri Ramadhana, Hikmah C. Ruchimat, Toni Santiadji, I. Wayan Veda Timisela, Natelda R. Veverka, Laura Ahmadia, Gabby N.
Publicado en: Marine Policy, Edición 137, 2022, Página(s) 104939, ISSN 0308-597X
Editor: Pergamon Press Ltd.
DOI: 10.1016/j.marpol.2021.104939

First report of mitochondrial COI in foraminifera and implications for DNA barcoding

Autores: Macher, J.-N., Wideman, J.G., Girard, E.B., Langerak, A., Duijm, E., Jompa, J., Sadekov, A., Vos, R., Wissels, R., Renema, W., 2021. First report of mitochondrial COI in foraminifera and implications for DNA barcoding. Sci. Rep. 11, 1–9.
Publicado en: Scientific Reports, Edición 11, 2021, Página(s) 1-9, ISSN 2045-2322
Editor: Nature Publishing Group
DOI: 10.1038/s41598-021-01589-5

Cryptic Diversity of Mediterranean <scp><i>Neogoniolithon</i></scp> (Corallinales, Corallinophycidae, Rhodophyta)

Autores: Dino Angelo E. Ramos, Jesús Del Río, Julio Peñas, Viviana Peña, Juan C. Braga
Publicado en: Aquatic Conservation: Marine and Freshwater Ecosystems, Edición 34, 2024, ISSN 1052-7613
Editor: John Wiley & Sons Inc.
DOI: 10.1002/aqc.4255

Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers.

Autores: Macher, J.-N., Bloska, D.M., Holzmann, M., Girard, E.B., Pawlowski, J., Renema, W
Publicado en: PeerJ, 2022, Página(s) e13952, ISSN 2689-7733
Editor: PeerJ publishing
DOI: 10.7717/peerj.13952

Simulation of the mid-Pliocene Warm Period using HadGEM3: experimental design and results from model–model and model–data comparison

Autores: Charles J. R. Williams, Alistair A. Sellar, Xin Ren, Alan M. Haywood, Peter Hopcroft, Stephen J. Hunter, William H. G. Roberts, Robin S. Smith, Emma J. Stone, Julia C. Tindall, Daniel J. Lunt
Publicado en: Climate of the Past, Edición 17/5, 2021, Página(s) 2139-2163, ISSN 1814-9332
Editor: European Geosciences Union
DOI: 10.5194/cp-17-2139-2021

A standardized database of Last Interglacial (MIS 5e) sea-level indicators in Southeast Asia

Autores: Kathrine Maxwell, Hildegard Westphal, Alessio Rovere
Publicado en: Earth System Science Data, Edición 13/9, 2021, Página(s) 4313-4329, ISSN 1866-3516
Editor: Copernicus Publications
DOI: 10.5194/essd-13-4313-2021

The rapid expansion of Indonesia's marine protected area requires improvement in management effectiveness

Autores: Amkieltiela, Handayani CN, Andradi-Brown DA, Estradivari, Ford AK, Berger M, Hakim A, Muenzel DK, Carter E, Agung F, Veverka L, Iqbal M, Lazuardi ME, Fauzi MN, Tranter SN, Ahmadia GN.
Publicado en: Marine Policy, 2022, Página(s) 105257, ISSN 0308-597X
Editor: Pergamon Press Ltd.
DOI: 10.1016/j.marpol.2022.105257

Mitochondrial Cytochrome Oxidase Subunit 1: A Promising Molecular Marker for Species Identification in Foraminifera

Autores: Girard, E.B., Langerak, A., Jompa, J., Wangensteen, O.S., Macher, J.-N., Renema, W
Publicado en: Frontiers in Marine Science, Edición 9, 2022, Página(s) 809659, ISSN 2296-7745
Editor: Frontiers
DOI: 10.3389/fmars.2022.809659

Digitizing the coral reef: Machine learning of underwater spectral images enables dense taxonomic mapping of benthic habitats

Autores: Schürholz, D., & Chennu, A.
Publicado en: Methods in Ecology and Evolution, Edición 14, 2023, Página(s) 596–613, ISSN 2041-210X
Editor: John Wiley and Sons Inc.
DOI: 10.1111/2041-210x.14029

The Punta de la Mona Rhodolith Bed: Shallow-Water Mediterranean Rhodoliths (Almuñecar, Granada, Southern Spain)

Autores: Del Río J, Ramos DA, Sánchez-Tocino L, Peñas J and Braga JC
Publicado en: Frontiers in Earth Sciences, Edición 10:884685, 2022, ISSN 2296-6463
Editor: Frontiers Media SA
DOI: 10.3389/feart.2022.884685

Rutterford, A., Bertini, L., Hendy, E. J., Johnson, K. G., Summerfield, R., & Burghardt, T. (2022). Towards the analysis of coral skeletal density-banding using deep learning. SN Applied Sciences, 4(2), 38

Autores: Rutterford, A., Bertini, L., Hendy, E. J., Johnson, K. G., Summerfield, R., & Burghardt, T.
Publicado en: SN Applied Sciences, Edición 42, 2022, Página(s) 38, ISSN 2523-3971
Editor: Springer
DOI: 10.1007/s42452-021-04912-x

The annelid community of a natural deep-sea whale fall off eastern Australia

Autores: Georgieva, M.N., Wiklund, H., Ramos, D.A., Neal, L., Glasby, C.J., Gunton, L.M.
Publicado en: Records of the Australian Museum, Edición 75, 2023, Página(s) 167-213, ISSN 2201-4349
Editor: Australian Museum
DOI: 10.3853/j.2201-4349.75.2023.1800

COI metabarcoding of large benthic Foraminifera: Method validation for application in ecological studies

Autores: Girard, E.B., Macher, J.-N., Jompa, J., Renema, W.
Publicado en: Ecology and Evolution, Edición 12, 2022, Página(s) e9549, ISSN 2045-7758
Editor: John Wiley and Sons Ltd
DOI: 10.1002/ece3.9549

Other (1)

Quaternary coral, coralline algal and vermetid assemblages as sea-level indicators: a review

Autores: Juan C. Braga, Marc Humblet, Dino Angelo E. Ramos, Belinda Dechnik, Jody M. Webster
Publicado en: Coral Reefs and Sea-Level Change: Quaternary Records and Modelling, 2022, Página(s) 1-38, ISBN 978-1-7398845-1-2
Editor: IAS
DOI: 10.54780/iassp49/01