Past, present and future of turbid reefs in the Coral Triangle

Informacje na temat projektu

4D_REEF

Identyfikator umowy o grant: 813360

DOI

10.3030/813360

Projekt został zamknięty

Data podpisania przez KE 6 Maja 2019

Data rozpoczęcia 1 Września 2019

Data zakończenia 29 Lutego 2024

Finansowanie w ramach

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Koszt całkowity

€ 4 039 155,72

Wkład UE

€ 4 039 155,72

Koordynowany przez

STICHTING NATURALIS BIODIVERSITY CENTER
Netherlands

CORDIS oferuje możliwość skorzystania z odnośników do publicznie dostępnych publikacji i rezultatów projektów realizowanych w ramach programów ramowych HORYZONT.

Odnośniki do rezultatów i publikacji związanych z poszczególnymi projektami 7PR, a także odnośniki do niektórych konkretnych kategorii wyników, takich jak zbiory danych i oprogramowanie, są dynamicznie pobierane z systemu OpenAIRE .

Rezultaty

Other (4)

Each ESR has presented results at 2 international conferences

Scientific deliverable - Each ESR has presented results at 2 international conferences

Topical session at European Geoscience Union

D2 Topical session at the Asia Pacific Coral Reef Symposium

Award ceremony for best 3 minute video, blog entry, research paper, and visualisation

D4 Award ceremony for best 3 minute video, blog entry, research paper, and visualisation

Each ESR has published at least 2 blogs

D3 Each ESR has published at least 2 blogs

Open Research Data Pilot (1)

All datasets published in suitable repositories

Scientific deliverable - All datasets published in suitable repositories

Documents, reports (1)

Each ESR published at least 1 first authored and 2 co-authored publications

Scientific deliverable - Each ESR published at least 1 first authored and 2 co-authored publications

Websites, patent fillings, videos etc. (1)

4D-REEF website operative

The website for 4D-REEF website is in operation.

Publikacje

Peer reviewed articles (24)

High diversity of benthic cyanobacterial mats on coral reefs of Koh Tao, Gulf of Thailand

Autorzy: Stuij, T. M., Cleary, D. F., Gomes, N. C.M., Mehrotra, R., Visser, P. M., Speksnijder, A. G., and Hoeksema, B. W.
Opublikowane w: Coral Reefs, 2023, ISSN 0722-4028
Wydawca: Springer Verlag
DOI: 10.1007/s00338-022-02304-0

Single-Cell Genomics Reveals the Divergent Mitochondrial Genomes of Retaria (Foraminifera and Radiolaria)

Autorzy: Macher, J.-N., Coots, N.L., Poh, Y.-P., Girard, E.B., Langerak, A., Muñoz-Gómez, S.A., Sinha, S.D., Jirsová, D., Vos, R., Wissels, R., Gile, G.H., Renema, W., Wideman, J.G.
Opublikowane w: MBio, Numer 14, 2023, Strona(/y) e0030223, ISSN 2150-7511
Wydawca: American Society for Microbiology
DOI: 10.1128/mbio.00302-23

Is the Coral Triangle’s future shown in a Pliocene reef gap?

Autorzy: Harrison, G.W.M., Santodomingo, N., Johnson, K.G. Renema, W.
Opublikowane w: Coral Reefs, Numer 42, 2023, Strona(/y) 1219–1225, ISSN 1432-0975
Wydawca: Springer
DOI: 10.1007/s00338-023-02412-5

Exploring Prokaryotic Communities in the Guts and Mucus of Nudibranchs, and Their Similarity to Sediment and Seawater Microbiomes

Autorzy: Tamara Stuij, Daniel F. R. Cleary, Ana R. M. Polónia, Sumaitt Putchakarn, Ana C. C. Pires, Newton C. M. Gomes & Nicole J. de Voogd
Opublikowane w: Current Microbiology, Numer 80, 2023, ISSN 0343-8651
Wydawca: Springer Verlag
DOI: 10.1007/s00284-023-03397-8

Impacts of humic substances, elevated temperature, and UVB radiation on bacterial communities of the marine sponge Chondrilla sp

Autorzy: Tamara M Stuij, Daniel F R Cleary, Rui J M Rocha, Ana R M Polónia, Davide A M Silva, Antonio Louvado, Nicole J de Voogd, Newton C M Gomes
Opublikowane w: FEMS Microbiology Ecology, Numer 100/3, 2024, ISSN 0168-6496
Wydawca: Blackwell
DOI: 10.1093/femsec/fiae022

The hydrological cycle and ocean circulation of the Maritime Continent in the Pliocene: results from PlioMIP2

Autorzy: Ren, X., Lunt, D. J., Hendy, E., von der Heydt, A., Abe-Ouchi, A., Otto-Bliesner, B., Williams, C. J. R., Stepanek, C., Guo, C., Chandan, D., Lohmann, G., Tindall, J. C., Sohl, L. E., Chandler, M. A., Kageyama, M., Baatsen, M. L. J., Tan, N., Zhang, Q., Feng, R., Hunter, S., Chan, W.-L., Peltier, W. R., Li, X., Kamae, Y., Zhang, Z., and Haywood, A. M.
Opublikowane w: Climate of the Past, Numer 19, 2023, Strona(/y) 2053-2077, ISSN 1814-9332
Wydawca: Gottingen Copernicus Publishers
DOI: 10.5194/cp-19-2053-2023,2023

Dynamics of large benthic foraminiferal assemblages: A tool to foreshadow reef degradation?

Autorzy: Girard, E.B., Estradivari, Ferse, S., Ambo-Rappe, R., Jompa, J., Renema, W.
Opublikowane w: Science of the Total Environment, Numer 811, 2022, Strona(/y) 151396, ISSN 1879-1026
Wydawca: Elsevier
DOI: 10.1016/j.scitotenv.2021.151396

Limited Progress in Improving Gender and Geographic Representation in Coral Reef Science

Autorzy: Gabby N. Ahmadia, Samantha H. Cheng, Dominic A. Andradi-Brown, Stacy K. Baez, Megan D. Barnes, Nathan J. Bennett, Stuart J. Campbell, Emily S. Darling, Estradivari, David Gill, Erika Gress, Georgina G. Gurney, Vera Horigue, Raymond Jakub, Emma V. Kennedy, Shauna L. Mahajan, Sangeeta Mangubhai, Shayle B. Matsuda, Nyawira A. Muthiga, Michael O. Navarro, Nadia Santodomingo, Henri Vallès, Laura Veve
Opublikowane w: Frontiers in Marine Science, Numer 8, 2021, ISSN 2296-7745
Wydawca: Frontiers Media
DOI: 10.3389/fmars.2021.731037

Seeing the Forest for the Trees: Mapping Cover and Counting Trees from Aerial Images of a Mangrove Forest Using Artificial Intelligence

Autorzy: Schürholz D, Castellanos-Galindo GA, Casella E, Mejía-Rentería JC, Chennu A
Opublikowane w: Remote Sensing, Numer 15, 2023, Strona(/y) 3334, ISSN 2072-4292
Wydawca: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/rs15133334

Hynes, M.G., O’Dea, A., Webster, J.M. and Renema, W., 2024. RADReef: A global Holocene Reef Rate of Accretion Dataset. Scientific Data, 11(1), p.398.

Autorzy: Hynes, M.G., O’Dea, A., Webster, J.M. and Renema, W
Opublikowane w: Scientific Data, Numer 11, 2024, Strona(/y) 398, ISSN 2052-4463
Wydawca: Springer
DOI: 10.1038/s41597-024-03228-w

Watching out for coral reefs with forams

Autorzy: Elsa B Girard Willem Renema
Opublikowane w: Frontiers for Young Minds, Numer 12, 2024, Strona(/y) 1122119, ISSN 2296-6846
Wydawca: Frontiers
DOI: 10.3389/frym.2024.1122119

Marine conservation beyond MPAs: Towards the recognition of other effective area-based conservation measures (OECMs) in Indonesia.

Autorzy: Estradivari, Agung, Muh Firdaus Adhuri, Dedi Supriadi Ferse, Sebastian C. A. Sualia, Ita Andradi-Brown, Dominic A. Campbell, Stuart J. Iqbal, Mohamad Jonas, Harry D. Lazuardi, Muhammad Erdi Nanlohy, Hellen Pakiding, Fitryanti Pusparini, Ni Kadek Sri Ramadhana, Hikmah C. Ruchimat, Toni Santiadji, I. Wayan Veda Timisela, Natelda R. Veverka, Laura Ahmadia, Gabby N.
Opublikowane w: Marine Policy, Numer 137, 2022, Strona(/y) 104939, ISSN 0308-597X
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.marpol.2021.104939

First report of mitochondrial COI in foraminifera and implications for DNA barcoding

Autorzy: Macher, J.-N., Wideman, J.G., Girard, E.B., Langerak, A., Duijm, E., Jompa, J., Sadekov, A., Vos, R., Wissels, R., Renema, W., 2021. First report of mitochondrial COI in foraminifera and implications for DNA barcoding. Sci. Rep. 11, 1–9.
Opublikowane w: Scientific Reports, Numer 11, 2021, Strona(/y) 1-9, ISSN 2045-2322
Wydawca: Nature Publishing Group
DOI: 10.1038/s41598-021-01589-5

Cryptic Diversity of Mediterranean <scp><i>Neogoniolithon</i></scp> (Corallinales, Corallinophycidae, Rhodophyta)

Autorzy: Dino Angelo E. Ramos, Jesús Del Río, Julio Peñas, Viviana Peña, Juan C. Braga
Opublikowane w: Aquatic Conservation: Marine and Freshwater Ecosystems, Numer 34, 2024, ISSN 1052-7613
Wydawca: John Wiley & Sons Inc.
DOI: 10.1002/aqc.4255

Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers.

Autorzy: Macher, J.-N., Bloska, D.M., Holzmann, M., Girard, E.B., Pawlowski, J., Renema, W
Opublikowane w: PeerJ, 2022, Strona(/y) e13952, ISSN 2689-7733
Wydawca: PeerJ publishing
DOI: 10.7717/peerj.13952

Simulation of the mid-Pliocene Warm Period using HadGEM3: experimental design and results from model–model and model–data comparison

Autorzy: Charles J. R. Williams, Alistair A. Sellar, Xin Ren, Alan M. Haywood, Peter Hopcroft, Stephen J. Hunter, William H. G. Roberts, Robin S. Smith, Emma J. Stone, Julia C. Tindall, Daniel J. Lunt
Opublikowane w: Climate of the Past, Numer 17/5, 2021, Strona(/y) 2139-2163, ISSN 1814-9332
Wydawca: European Geosciences Union
DOI: 10.5194/cp-17-2139-2021

A standardized database of Last Interglacial (MIS 5e) sea-level indicators in Southeast Asia

Autorzy: Kathrine Maxwell, Hildegard Westphal, Alessio Rovere
Opublikowane w: Earth System Science Data, Numer 13/9, 2021, Strona(/y) 4313-4329, ISSN 1866-3516
Wydawca: Copernicus Publications
DOI: 10.5194/essd-13-4313-2021

The rapid expansion of Indonesia's marine protected area requires improvement in management effectiveness

Autorzy: Amkieltiela, Handayani CN, Andradi-Brown DA, Estradivari, Ford AK, Berger M, Hakim A, Muenzel DK, Carter E, Agung F, Veverka L, Iqbal M, Lazuardi ME, Fauzi MN, Tranter SN, Ahmadia GN.
Opublikowane w: Marine Policy, 2022, Strona(/y) 105257, ISSN 0308-597X
Wydawca: Pergamon Press Ltd.
DOI: 10.1016/j.marpol.2022.105257

Mitochondrial Cytochrome Oxidase Subunit 1: A Promising Molecular Marker for Species Identification in Foraminifera

Autorzy: Girard, E.B., Langerak, A., Jompa, J., Wangensteen, O.S., Macher, J.-N., Renema, W
Opublikowane w: Frontiers in Marine Science, Numer 9, 2022, Strona(/y) 809659, ISSN 2296-7745
Wydawca: Frontiers
DOI: 10.3389/fmars.2022.809659

Digitizing the coral reef: Machine learning of underwater spectral images enables dense taxonomic mapping of benthic habitats

Autorzy: Schürholz, D., & Chennu, A.
Opublikowane w: Methods in Ecology and Evolution, Numer 14, 2023, Strona(/y) 596–613, ISSN 2041-210X
Wydawca: John Wiley and Sons Inc.
DOI: 10.1111/2041-210x.14029

The Punta de la Mona Rhodolith Bed: Shallow-Water Mediterranean Rhodoliths (Almuñecar, Granada, Southern Spain)

Autorzy: Del Río J, Ramos DA, Sánchez-Tocino L, Peñas J and Braga JC
Opublikowane w: Frontiers in Earth Sciences, Numer 10:884685, 2022, ISSN 2296-6463
Wydawca: Frontiers Media SA
DOI: 10.3389/feart.2022.884685

Rutterford, A., Bertini, L., Hendy, E. J., Johnson, K. G., Summerfield, R., & Burghardt, T. (2022). Towards the analysis of coral skeletal density-banding using deep learning. SN Applied Sciences, 4(2), 38

Autorzy: Rutterford, A., Bertini, L., Hendy, E. J., Johnson, K. G., Summerfield, R., & Burghardt, T.
Opublikowane w: SN Applied Sciences, Numer 42, 2022, Strona(/y) 38, ISSN 2523-3971
Wydawca: Springer
DOI: 10.1007/s42452-021-04912-x

The annelid community of a natural deep-sea whale fall off eastern Australia

Autorzy: Georgieva, M.N., Wiklund, H., Ramos, D.A., Neal, L., Glasby, C.J., Gunton, L.M.
Opublikowane w: Records of the Australian Museum, Numer 75, 2023, Strona(/y) 167-213, ISSN 2201-4349
Wydawca: Australian Museum
DOI: 10.3853/j.2201-4349.75.2023.1800

COI metabarcoding of large benthic Foraminifera: Method validation for application in ecological studies

Autorzy: Girard, E.B., Macher, J.-N., Jompa, J., Renema, W.
Opublikowane w: Ecology and Evolution, Numer 12, 2022, Strona(/y) e9549, ISSN 2045-7758
Wydawca: John Wiley and Sons Ltd
DOI: 10.1002/ece3.9549

Other (1)

Quaternary coral, coralline algal and vermetid assemblages as sea-level indicators: a review

Autorzy: Juan C. Braga, Marc Humblet, Dino Angelo E. Ramos, Belinda Dechnik, Jody M. Webster
Opublikowane w: Coral Reefs and Sea-Level Change: Quaternary Records and Modelling, 2022, Strona(/y) 1-38, ISBN 978-1-7398845-1-2
Wydawca: IAS
DOI: 10.54780/iassp49/01