Molecular logic lab-on-a-vesicle for intracellular diagnostics

Informations projet

LOGIC LAB

N° de convention de subvention: 813920

DOI

10.3030/813920

Projet clôturé

Date de signature de la CE 17 Août 2018

Date de début 1 Novembre 2018

Date de fin 31 Octobre 2023

Financé au titre de

• EXCELLENT SCIENCE - Marie Skłodowska-Curie Actions

Coût total

€ 3 538 684,44

Contribution de l’UE

€ 3 538 684,44

Coordonné par

LEIBNIZ-INSTITUT FUER PHOTONISCHE TECHNOLOGIEN E.V.
Germany

CORDIS fournit des liens vers les livrables publics et les publications des projets HORIZON.

Les liens vers les livrables et les publications des projets du 7e PC, ainsi que les liens vers certains types de résultats spécifiques tels que les jeux de données et les logiciels, sont récupérés dynamiquement sur OpenAIRE .

Livrables

Other (6)

Awarding of doctoral degrees
Network meeting 4

Network meeting 4 is delivered

Final symposium

Final symposium is held

Network meeting 1

Network meeting 1 is delivered

Network meeting 3

Network meeting 3 is delivered

Network meeting 2

Network meeting 2 is delivered

Documents, reports (9)

Delivery of supramolecular logic gates to living endothelial cells / co-cultures

Based on results from D2.2, a protocol to deliver supramolecular logic gates to living endothelial cells / co-cultures is developed

Animal disease models

Suitable animal disease models are identified

Living 2D cell cultures and co-cultures

Living 2D cell cultures and co-cultures are available

Proof-of-principle for TTA-UC supramolecular sensing

Proof-of-principle for TTA-UC supramolecular sensing is shown

Delivery of supramolecular logic gates to a MemSense or GUV membrane model

A protocol for delivery of supramolecular logic gates to a MemSense or GUV membrane model is established

Metabolomic profile of ED pathology

A metabolomic profile of ED pathology is established

Theoretical models for the excited state levels of the sensors

Theoretical models for the excited state levels of the sensors are established

Stable and well-characterized liposomes

Stable and well-characterized liposomes are prepared to transport the logic gates in buffer and serum

Photochemical and photophysical characteristics

Photochemical and photophysical characteristics are known

Websites, patent fillings, videos etc. (1)

ESR positions are advertised

ESR positions are advertised at national and European-wide portals and the LOGIC LAB website (e.g. Euraxess)

Open Research Data Pilot (1)

Research results are published

Research results are published in peer-reviewed, open access journals and books

Publications

Peer reviewed articles (26)

Uptake and anti-inflammatory effects of liposomal astaxanthin on endothelial cells tracked by Raman and fluorescence imaging

Auteurs: Radwan, Basseem Prabhakaran, Amrutha Rocchetti, Stefano Matuszyk, Ewelina Keyes, Tia E. Baranska, Malgorzata
Publié dans: Microchim Acta, Numéro 190, 2023, ISSN 0026-3672
Éditeur: Springer Verlag
DOI: 10.1007/s00604-023-05888-8

EdU sensing: The Raman way of following endothelial cell proliferation in vitro and ex vivo

Auteurs: Basseem Radwan; Stefano Rocchetti; Ewelina Matuszyk; Magdalena Sternak; Maciej Stodulski; Robert Pawlowski; Jacek Mlynarski; Krzysztof Brzozowski; Stefan Chlopicki; Malgorzata Baranska
Publié dans: Biosensors and Bioelectronics, Numéro 216, 2022, ISSN 0956-5663
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.bios.2022.114624

Combining nitric oxide and calcium sensing for the detection of endothelial dysfunction

Auteurs: Andreeva, Valeriia D. Ehlers, Haley R. C, Aswin Krishna Presselt, Martin J. Van Den Broek, Lenie Bonnet, Sylvestre
Publié dans: Communications Chemistry, 2023, ISSN 2399-3669
Éditeur: Springer
DOI: 10.1038/s42004-023-00973-8

Radiative lifetime of a BODIPY dye as calculated by TDDFT and EOM-CCSD methods: solvent and vibronic effects

Auteurs: Rengel Cane E. Sia, Ruben Arturo Arellano-Reyes, Tia E. Keyes , Julien Guthmuller
Publié dans: Physical Chemistry Chemical Physics, Numéro 23, 2021, Page(s) 26324-26335, ISSN 1463-9084
Éditeur: Royal Socienty of Chemistry
DOI: 10.1039/d1cp03775g

Interaction of Miltefosine with Microcavity Supported Lipid Membrane: Biophysical Insights from Electrochemical Impedance Spectroscopy

Auteurs: Nirod Kumar Sarangi, Amrutha Prabhakaran, Tia E. Keyes
Publié dans: Electroanalysis, 2020, ISSN 1040-0397
Éditeur: Wiley - V C H Verlag GmbbH & Co.
DOI: 10.1002/elan.202060424

Excited-State Dynamics in Borylated Arylisoquinoline Complexes in Solution and <i>in cellulo</i>

Auteurs: Yang, T. X. Valavalkar, A. Romero-Arenas, A. Dasgupta, A. Then, P. Chettri, A. Eggeling, C. Ros, A. Pischel, U. Dietzek-Ivansic, B.
Publié dans: Chemistry-a European Journal, 2023, ISSN 0947-6539
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1002/chem.202203468

Monitoring excited-state relaxation in a molecular marker in live cells–a case study on astaxanthin

Auteurs: Tingxiang Yang, Avinash Chettri, Basseem Radwan, Ewelina Matuszyk, Malgorzata Baranska, Benjamin Dietzek
Publié dans: Chemical Communications, 2021, ISSN 1359-7345
Éditeur: Royal Society of Chemistry
DOI: 10.1039/d1cc01907d

Labeled vs. Label-Free Raman Imaging of Lipids in Endothelial Cells of Various Origins

Auteurs: Basseem Radwan; Adriana Adamczyk; Szymon Tott; Krzysztof Czamara; Katarzyna Kaminska; Ewelina Matuszyk; Malgorzata Baranska
Publié dans: Molecules, Numéro 25, 2020, Page(s) 5752-5760, ISSN 1420-3049
Éditeur: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/molecules25235752

Multiplex Raman imaging of organelles in endothelial cells

Auteurs: Ewelina Matuszyk, Adriana Adamczyk, Basseem Radwan, Anna Pieczara, Piotr Szcześniak, Jacek Mlynarski, Katarzyna Kamińska, Malgorzata Baranska
Publié dans: Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, Numéro 255, 2021, Page(s) 119658, ISSN 1386-1425
Éditeur: Pergamon Press Ltd.
DOI: 10.1016/j.saa.2021.119658

Using Biological Photophysics to Map the Excited‐State Topology of Molecular Photosensitizers for Photodynamic Therapy

Auteurs: Avinash Chettri; Tingxiang Yang; Houston D. Cole; Ge Shi; Colin G. Cameron; Sherri A. McFarland; Benjamin Dietzek‐Ivanšić
Publié dans: Angewandte Chemie International Edition, Numéro 62, 2023, ISSN 1433-7851
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1002/anie.202301452

A BODIPY‐Based Molecular Rotor in Giant Unilamellar Vesicles: A Case Study by Polarization‐Resolved Time‐Resolved Emission and Transient Absorption Spectroscopy

Auteurs: Keshav Kumar Jha; Amrutha Prabhakaran; Lukas Spantzel; Rengel Cane Sia; Iván Pérez; Ruben Arturo Arellano‐Reyes; Anna Elmanova; Anindita Dasgupta; Christian Eggeling; Michael Börsch; Julien Guthmuller; Martin Presselt; Tia E. Keyes; Benjamin Dietzek‐Ivanšić
Publié dans: ChemPhotoChem, Numéro 7, 2023, ISSN 2367-0932
Éditeur: John Wiley & Sons, Ltd
DOI: 10.1002/cptc.202300091

Multimodal Investigation into the Interaction of Quinacrine with Microcavity-Supported Lipid Bilayers

Auteurs: Nirod Kumar Sarangi Amrutha Prabhakaran Tia E. Keyes
Publié dans: Langmuir, Numéro 38 (20), 2022, Page(s) 6411–6424, ISSN 0743-7463
Éditeur: American Chemical Society
DOI: 10.1021/acs.langmuir.2c00524

Triplet Formation and Triplet-Triplet Annihilation Upconversion in Iodine Substituted Non-Orthogonal BODIPY-Perylene Dyads

Auteurs: Jha, K. K. Prabhakaran, A. Sia, R. C. Reyes, R. A. A. Sarangi, N. K. Yang, T. X. Kumar, K. Kupfer, S. Guthmuller, J. Keyes, T. E. Dietzek-Ivansic, B.
Publié dans: Chemphotochem, 2023, ISSN 2367-0932
Éditeur: John Wiley & Sons
DOI: 10.1002/cptc.202300073

Supramolecular Reorientation During Deposition Onto Metal Surfaces of Quasi-Two-Dimensional Langmuir Monolayers Composed of Bifunctional Amphiphilic, Twisted Perylenes

Auteurs: Hupfer, M. L. Meyer, R. Deckert-Gaudig, T. Ghosh, S. Skabeev, A. Peneva, K. Deckert, V. Dietzek, B. Presselt, M.
Publié dans: Langmuir, Numéro 37, 2021, ISSN 0743-7463
Éditeur: American Chemical Society
DOI: 10.1021/acs.langmuir.1c01525

In Cellulo Light‐Induced Dynamics in a BODIPY‐Perylene Dyad

Auteurs: Tingxiang Yang; Ruben Arturo Arellano-Reyes; Rhianne C. Curley; Keshav Kumar Jha; Avinash Chettri; Tia E. Keyes; Benjamin Dietzek-Ivanšić
Publié dans: Chemistry – A European Journal, Numéro 29, 2023, ISSN 0947-6539
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1002/chem.202300224

Shorter Alkyl Chains Enhance Molecular Diffusion and Electron Transfer Kinetics between Photosensitisers and Catalysts in CO2-Reducing Photocatalytic Liposomes

Auteurs: David M. Klein Dr. Santiago Rodríguez-Jiménez Marlene E. Hoefnagel Dr. Andrea Pannwitz Amrutha Prabhakaran Dr. Maxime A. Siegler Prof. Tia E. Keyes Prof. Erwin Reisner Prof. Albert M. Brouwer Prof. Sylvestre Bonnet
Publié dans: Chemistry - A European Journnal, Numéro 27, 2021, Page(s) 17203-17212, ISSN 1521-3765
Éditeur: Wiley-VCH GmbH, Weinheim
DOI: 10.1002/chem.202102989

Leaflet by Leaflet Synergistic Effects of Antimicrobial Peptides on Bacterial and Mammalian Membrane Models

Auteurs: Arpita Roy; Nirod Kumar Sarangi; Surajit Ghosh; Amrutha Prabhakaran; Tia E. Keyes
Publié dans: The Journal of Physical Chemistry Letters, Numéro 14, 2023, ISSN 1948-7185
Éditeur: American Chemical Society
DOI: 10.1021/acs.jpclett.3c00119

Toward Raman Subcellular Imaging of Endothelial Dysfunction

Auteurs: Adriana Adamczyk, Ewelina Matuszyk, Basseem Radwan, Stefano Rocchetti, Stefan Chlopicki, Malgorzata Baranska
Publié dans: Journal of Medicinal Chemistry, Numéro 64/8, 2021, Page(s) 4396-4409, ISSN 0022-2623
Éditeur: American Chemical Society
DOI: 10.1021/acs.jmedchem.1c00051

Dichroic Dipole Antenna Membranes from Aligned Linear BOPHY Dyes

Auteurs: Hupfer, M. L. Ghosh, S. Wang, Yingchun Opsomer, Tomas Dehaen, W. Presselt, M.
Publié dans: Advanced Materials Interfaces, 2021, ISSN 2196-7350
Éditeur: John Wiley & Sons
DOI: 10.1002/admi.202101490

Astaxanthin as a new Raman probe for biosensing of specific subcellular lipidic structures: can we detect lipids in cells under resonance conditions?

Auteurs: Krzysztof Czamara, Adriana Adamczyk, Marta Stojak, Basseem Radwan, Malgorzata Baranska
Publié dans: Cellular and Molecular Life Sciences, 2020, ISSN 1420-682X
Éditeur: Birkhauser Verlag
DOI: 10.1007/s00018-020-03718-1

New Highly Sensitive and Specific Raman Probe for Live Cell Imaging of Mitochondrial Function

Auteurs: Pieczara, Anna Arellano Reyes, Ruben Arturo Keyes, Tia E. Dawiec, Patrycja Baranska, Malgorzata
Publié dans: ACS Sensors, Numéro 9, 2024, ISSN 2379-3694
Éditeur: American Chemical Society
DOI: 10.1021/acssensors.3c02576

BODIPY‐Perylene Charge Transfer Compounds; Sensitizers for Triplet‐Triplet Annihilation Up‐conversion

Auteurs: Ruben Arturo Arellano‐Reyes; Amrutha Prabhakaran; Rengel Cane E. Sia; Julien Guthmuller; Keshav Kumar Jha; Tingxiang Yang; Benjamin Dietzek‐Ivanšić; Vickie McKee; Tia E. Keyes
Publié dans: Chemistry – A European Journal, Numéro 29, 2023, ISSN 0947-6539
Éditeur: John Wiley & Sons Ltd.
DOI: 10.1002/chem.202300239

Vascular inflammation on a chip: A scalable platform for trans-endothelial electrical resistance and immune cell migration

Auteurs: Haley, Ehlers; Arnaud, Nicolas; Frederik, Schavemaker; Jeroen P M, Heijmans; Martin, Bulst; Sebastiaan J, Trietsch; Lenie J, van den Broek
Publié dans: Front Immunol, Numéro 14, 2023, ISSN 1664-3224
Éditeur: Frontiers Media S.A.
DOI: 10.3389/fimmu.2023.1118624

Triplet–Triplet Annihilation Upconversion by Polymeric Sensitizers

Auteurs: Keshav Kumar Jha Amrutha Prabhakaran Christopher S. Burke Marcus Schulze Ulrich S. Schubert Tia E. Keyes Michael Jäger Benjamin Dietzek Ivanšić
Publié dans: Journal of Physical Chemistry C, Numéro 126, 2022, Page(s) 4057–4066, ISSN 1932-7447
Éditeur: American Chemical Society
DOI: 10.1021/acs.jpcc.1c09897

Bifacial Dye Membranes: Ultrathin and Free-Standing although not Being Covalently Bound

Auteurs: Hupfer, M. L. Dellith, J. Seyring, M. Diegel, M. Dellith, A. Ghosh, S. Rettenmayr, M. Dietzek-Ivansic, B. Presselt, M.
Publié dans: Advanced Materials, 2023, ISSN 0935-9648
Éditeur: United Nations Industrial Developement Organization
DOI: 10.1002/adma.202204874

Evaluation of the passive permeability of antidepressants through pore-suspended lipid bilayer

Auteurs: Sarangi, Nirod Kumar Prabhakaran, Amrutha Roantree, Mark Keyes, Tia E.
Publié dans: Colloids and Surfaces B: Biointerfaces, 2024, ISSN 0927-7765
Éditeur: Elsevier BV
DOI: 10.1016/j.colsurfb.2023.113688

Non-peer reviewed articles (2)

Tracer-based metabolomics for profiling nitric oxide metabolites in a 3D microvessel-on-a-chip model

Auteurs: Pandian, Kanchana Huang, Luojiao Junaid, Abidemi Harms, Amy Van Zonneveld, Anton Jan Hankemeier, Thomas
Publié dans: BioRXiv, 2023, ISSN 2692-8205
Éditeur: bioRxiv
DOI: 10.1101/2023.12.03.569402

Triplet-triplet annihilation upconversion for calcium sensing

Auteurs: Andreeva, Valeriia D. Yang, Tingxiang Regeni, Irene Dietzek-Ivanšić, Benjamin Bonnet, Sylvestre A.
Publié dans: ChemRxiv, 2023, ISSN 2573-2293
Éditeur: ChemRxiv
DOI: 10.26434/chemrxiv-2023-7p1s5