Mechanistic principles of regulation by small RNAs

Project Information

RegRNA

Grant agreement ID: 833598

DOI

10.3030/833598

EC signature date 18 April 2019

Start date 1 September 2019

End date 31 August 2026

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 2 278 125,00

EU contribution

€ 2 278 125,00

Coordinated by

THE HEBREW UNIVERSITY OF JERUSALEM
Israel

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (9)

Inferring the contribution of small RNAs to changes in gene expression in response to stress

Author(s): Meshi Barsheshet, Shira Fisher, Hanah Margalit
Published in: NAR Genomics and Bioinformatics, Issue March 4, 2022, 2022, ISSN 2631-9268
Publisher: Oxford University Press
DOI: 10.1093/nargab/lqac015

Prediction of Novel Bacterial Small RNAs From RIL-Seq RNA–RNA Interaction Data

Author(s): Amir Bar, Liron Argaman, Yael Altuvia, Hanah Margalit
Published in: Frontiers in Microbiology, Issue May 21, 2021, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.635070

Hierarchy in Hfq Chaperon Occupancy of Small RNA Targets Plays a Major Role in Their Regulation

Author(s): Raya Faigenbaum-Romm, Avichai Reich, Yair E. Gatt, Meshi Barsheshet, Liron Argaman, Hanah Margalit
Published in: Cell Reports, Issue 30/9, 2020, Page(s) 3127-3138.e6, ISSN 2211-1247
Publisher: Cell Press
DOI: 10.1016/j.celrep.2020.02.016

Global RNA interactome of Salmonella discovers a 5′ UTR sponge for the MicF small RNA that connects membrane permeability to transport capacity

Author(s): Gianluca Matera, Yael Altuvia, Milan Gerovac, Youssef El Mouali, Hanah Margalit, Joerg Vogel
Published in: Molecular Cell, Issue January 20, 2022, 2022, Page(s) 629-644, ISSN 1097-2765
Publisher: Cell Press
DOI: 10.1016/j.molcel.2021.12.030

Formation of a membraneless compartment regulates bacterial virulence

Author(s): Lior Aroeti, Netanel Elbaz, Raya Faigenbaum-Romm, Oren Yakovian, Yael Altuvia, Liron Argaman, Naama Katsowich, Michal Bejerano-Sagie, Miriam Ravins, Hanah Margalit, Sigal Ben-Yehuda, Ilan Rosenshine
Published in: Nature Communications, Issue 16, 2025, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-025-58829-9

Unraveling the interplay between a small RNA and RNase E in bacteria

Author(s): Meshi Barsheshet Vigoda, Liron Argaman, Mark Kournos, Hanah Margalit
Published in: Nucleic Acids Research, Issue 52, 2024, Page(s) 8947-8966, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkae621

TRS: a method for determining transcript termini from RNAtag-seq sequencing data

Author(s): Amir Bar, Liron Argaman, Michal Eldar, Hanah Margalit
Published in: Nature Communications, Issue 29 November 2023, 2023, Page(s) 7843, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-43534-2

The impact of Hfq-mediated sRNA-mRNA interactome on the virulence of enteropathogenic Escherichia coli

Author(s): Sivan Pearl Mizrahi, Nenanel Elbaz, Liron Argaman, Yael Altuvia, Naama Katsowich, Yaakov Socol, Amir Bar, Ilan Rosenshine, Hanah Margalit
Published in: Scince Advances, Issue October, 27 2021, 2021, ISSN 2375-2548
Publisher: Science
DOI: 10.1126/sciadv.abi8228

RIL-seq reveals extensive involvement of small RNAs in virulence and capsule regulation in hypervirulent <i>Klebsiella pneumoniae</i>

Author(s): Kwok Jian Goh, Yael Altuvia, Liron Argaman, Yair Raz, Amir Bar, Trevor Lithgow, Hanah Margalit, Yunn-Hwen Gan
Published in: Nucleic Acids Research, Issue 52, 2024, Page(s) 9119-9138, ISSN 0305-1048
Publisher: Oxford University Press
DOI: 10.1093/nar/gkae440