Methane and Ammonium Removal In redoX transition zones

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Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Hydrogen Oxidation Benefits Alphaproteobacterial Methanotrophs Under Severe Methane Limitation

Author(s): Ida F. Peterse, Arjan Pol, Geert Cremers, Tom Berben, Theo A. van Alen, Huub J. M. Op den Camp, Annelies J. Veraart, Sebastian Lücker
Published in: Environmental Microbiology, Issue 27, 2025, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.70163

Fe(II)Cl2 amendment suppresses pond methane emissions by stimulating iron-dependent anaerobic oxidation of methane

Author(s): Quinten Struik, José R Paranaíba, Martyna Glodowska, Sarian Kosten, Berber M J W Meulepas, Ana B Rios-Miguel, Mike S M Jetten, Miquel Lürling, Guido Waajen, Thomas P A Nijman, Annelies J Veraart
Published in: FEMS Microbiology Ecology, Issue 100, 2024, ISSN 1574-6941
Publisher: Oxford University Press (OUP)
DOI: 10.1093/femsec/fiae061

Sedimentary molybdenum and uranium: Improving proxies for deoxygenation in coastal depositional environments

Author(s): K. Mareike Paul, NIels A.G.M. van Helmond, Caroline P. Slomp, Sami A. Jokinen, Joonas J. Virtasal, Helena L. Filipsson, Tom Jilbert
Published in: Chemical Geology, Issue 651, 2023, ISSN 0346-251X
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.chemgeo.2022.121203

Nitrate Leaching and its Implication for Fe and as Mobility in a Southeast Asian Aquifer

Author(s): Martyna Glodowska; Yinxiao Ma; Garrett Smith; Andreas Kappler; Mike Jetten; Cornelia U. Welte
Published in: FEMS Microbiology Ecology, Issue 1, 2023, Page(s) 1-10, ISSN 1574-6941
Publisher: Oxford
DOI: 10.2139/ssrn.4255499

Iron Modulates the Growth and Activity of Nitrate-Dependent Methanotrophic Bacteria by Reprogramming Carbon Metabolism

Author(s): Xiangwu Yao, Meng Zhang, Mike S. M. Jetten, Lizhong Zhu, Baolan Hu
Published in: Environmental Science & Technology, Issue 59, 2025, Page(s) 9134-9145, ISSN 0013-936X
Publisher: American Chemical Society
DOI: 10.1021/acs.est.5c01275

Long-Term Euxinia Restricts Microbial Methane Removal in Eutrophic Coastal Basins

Author(s): Jessica Venetz, Nicky Dotsios, Olga M. Żygadłowska, Wytze K. Lenstra, Niels A.G.M van Helmond, Christoph Humborg, Katherine D. McMahon, Dina in ’t Zandt, Caroline P. Slomp, Mike S. M. Jetten, Annelies J. Veraart
Published in: Environmental Science & Technology, Issue 59, 2025, Page(s) 21988-22000, ISSN 0013-936X
Publisher: American Chemical Society
DOI: 10.1021/acs.est.5c05066

Nitrous oxide sources, mechanisms and mitigation

Author(s): Guibing Zhu, Hao Shi, Lei Zhong, Guang He, Baozhan Wang, Jun Shan, Ping Han, Tongxu Liu, Shanyun Wang, Chunlei Liu, Nan Zhang, Liping Jiang, Longbin Yu, Chunhui Zhan, Ziyang Tang, Teng Wen, Bin Ma, Xiaoxuan Su, Shujun Zhang, Jinbo Zhang, Hongjie Di, Lijun Hou, Alexander H. Krichels, Mark Trimmer, Mike S. M. Jetten, Yongzhen Peng, Frank E. Löffler, Hanqin Tian, Yong-Guan Zhu
Published in: Nature Reviews Earth & Environment, Issue 6, 2025, Page(s) 574-592, ISSN 2662-138X
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/s43017-025-00707-5

Amsterdam urban canals contain novel niches for methane-cycling microorganisms

Author(s): Pelsma, Koen A.J. Zandt, M.H. in 't Camp, Huub J.M. Op den Jetten, Mike S.M. Dean, J.F. Welte, C.U.
Published in: environmental microbiology, Issue 24, 2022, Page(s) 82-97, ISSN 1462-2920
Publisher: ami
DOI: 10.1111/1462-2920.15864

Dissolved Mn(III) is a key redox intermediate in sediments of a seasonally euxinic coastal basin

Author(s): Robin Klomp, Olga M. Żygadłowska, Mike S. M. Jetten, Véronique E. Oldham, Niels A. G. M. van Helmond, Caroline P. Slomp, Wytze K. Lenstra
Published in: Biogeosciences, Issue 22, 2025, Page(s) 751-765, ISSN 1726-4189
Publisher: Copernicus GmbH
DOI: 10.5194/bg-22-751-2025

Hydroxylamine production by Alcaligenes faecalis challenges the paradigm of heterotrophic nitrification

Author(s): Wouter B. Lenferink, Lars R. Bakken, Mike S. M. Jetten, Maartje A. H. J. van Kessel, Sebastian Lücker
Published in: Science Advances, Issue 10, 2024, ISSN 2375-2548
Publisher: American Association for the Advancement of Science (AAAS)
DOI: 10.1126/sciadv.adl3587

Effects of redox variability and early diagenesis on marine sedimentary Hg records

Author(s): J. Frieling, T.A. Mather, C. Marz, H.C. Jenkyns, R. Hennekam, G.-j.Reichart C. P. Slomp, N.A.G.M. van Helmond
Published in: Geochimica et Cosmochimica Acta, Issue 351, 2023, Page(s) 78-95, ISSN 0346-251X
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.gca.2023.04.015

Methanotrophic flexibility of ‘Ca. Methanoperedens’ and its interactions with sulfate-reducing bacteria in the sediment of meromictic Lake Cadagno

Author(s): Maider J. Echeveste Medrano, Guangyi Su, Lucas A. Blattner, Pedro Leão, Irene Sánchez-Andrea, Mike S. M. Jetten, Cornelia U. Welte, Jakob Zopfi
Published in: environmental; microbiology, 2024, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1101/2024.11.08.622632

The clumped isotope signatures of multiple methanogenesis metabolisms

Author(s): Jiawen Li, Jeanine L. Ash, Alec Cobban, Briana C. Kubik, Gabriella Rizzo, Mia Thompson, Laetitia Guibourdenche, Stefanie Berger, Kaycee Morra, Ying Lin, Elliott P. Mueller, Andrew L. Masterson, Rebekah Stein, Marilyn Fogel, Mark A. Torres, Xiahong Feng, James F. Holden, Anna Martini, Cornelia U. Welte, Mike Jetten, Edward D. Young, William D. Leavitt
Published in: environmental science and technology, 2024, ISSN 0013-936X
Publisher: American Chemical Society
DOI: 10.1101/2024.12.18.629299

Characterization of a nitrite-reducing octaheme hydroxylamine oxidoreductase that lacks the tyrosine cross-link

Author(s): Christina Ferousi, Rob A. Schmitz, Wouter J. Maalcke, Simon Lindhoud, Wouter Versantvoort, Mike S.M. Jetten, Joachim Reimann, Boran Kartal
Published in: Journal of Biological Chemistry, Issue 296, 2021, Page(s) 100476, ISSN 0021-9258
Publisher: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1016/j.jbc.2021.100476

Methane-dependent complete denitrification by a single Methylomirabilis bacterium

Author(s): Xiangwu Yao, Jiaqi Wang, Mingyue He, Zishu Liu, Yuxiang Zhao, Yufen Li, Taolve Chi, Lin Zhu, Ping Zheng, Mike S. M. Jetten, Baolan Hu
Published in: Nature Microbiology, Issue 9, 2024, Page(s) 464-476, ISSN 2058-5276
Publisher: Springer Science and Business Media LLC
DOI: 10.1038/s41564-023-01578-6

Ebullition drives high methane emissions from a eutrophic coastal basin

Author(s): Olga M. Żygadłowska, Jessica Venetz, Wytze K. Lenstra, Niels A.G.M. van Helmond, Robin Klomp, Thomas Röckmann, Annelies J. Veraart, Mike S.M. Jetten, Caroline P. Slomp
Published in: Geochimica et Cosmochimica Acta, Issue 384, 2024, Page(s) 1-13, ISSN 0016-7037
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.gca.2024.08.028

Novel and unusual genes for nitrogen and metal cycling in Planctomycetota- and KSB1-affiliated metagenome-assembled genomes reconstructed from a marine subsea tunnel

Author(s): Carolina Suarez; Thomas Hackl; Britt-Marie Wilen; Frank Persson; Per Hagelia; Mike S M Jetten; Paula Dalcin Martins
Published in: FEMS Microbiology Letters, 370, pp. 1-10, Issue 5, 2022, Page(s) 1-10, ISSN 1574-6968
Publisher: fems
DOI: 10.1093/femsle/fnad049

Methanotrophic Flexibility of ‘Ca. Methanoperedens’ and Its Interactions With Sulphate‐Reducing Bacteria in the Sediment of Meromictic Lake Cadagno

Author(s): Maider J. Echeveste Medrano, Guangyi Su, Lucas A. Blattner, Pedro Leão, Irene Sánchez‐Andrea, Mike S. M. Jetten, Cornelia U. Welte, Jakob Zopfi
Published in: Environmental Microbiology, Issue 27, 2025, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.70133

Methanotrophic potential of Dutch canal wall biofilms is driven by Methylomonadaceae

Author(s): Koen A J Pelsma; Daniël A M Verhagen; Joshua F Dean; Mike S M Jetten; Cornelia U Welte
Published in: FEMS Microbiology Ecology, 99, 10, pp. 1-9, Issue 2, 2023, Page(s) 1-9, ISSN 1574-6941
Publisher: Oxford
DOI: 10.1093/femsec/fiad110

Methanethiol Consumption and Hydrogen Sulfide Production by the Thermoacidophilic Methanotroph Methylacidiphilum fumariolicum SolV

Author(s): Rob A. Schmitz; Sepehr S. Mohammadi; Timo van Erven; Tom Berben; Mike S. M. Jetten; Arjan Pol; Huub J. M. Op den Camp
Published in: frontiers in microbiology, Issue 5, 2022, Page(s) 1-10, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.857442

Nitrate-dependent anaerobic methane oxidation (N-DAMO) as a bioremediation strategy for waters affected by agricultural runoff

Author(s): Annabel Legierse, Quinten Struik, Garrett Smith, Maider J Echeveste Medrano, Stefan Weideveld, Gijs van Dijk, Alfons J P Smolders, Mike Jetten, Annelies J Veraart, Cornelia U Welte, Martyna Glodowska
Published in: FEMS Microbiology Letters, Issue 370, 2023, ISSN 1574-6968
Publisher: Oxford University Press (OUP)
DOI: 10.1093/femsle/fnad041

Microbial activity, methane production, and carbon storage in Early Holocene North Sea peats

Author(s): Lippmann, T.J.R., M.H. in ’t Zandt, N.N.L. van der Putten, F.S. Busshers, M.P. Hijma, P. van der Velden, T. de Groot, Z. van Aalderen, O.H. Meisel, C.P. Slomp, H. Niemann, M.S.M. Jetten, H.A.J. Dolman, C.U. Welte
Published in: Biogeosciences, Issue 18, 2021, Page(s) 5491-5511, ISSN 1726-4170
Publisher: European Geosciences Union (EGU).
DOI: 10.5194/bg-18-5491-2021

Pathways of methane removal in the sediment and water column of a seasonally anoxic eutrophic marine basin

Author(s): Olga M. Żygadłowska, Jessica Venetz Robin Klomp, Wytze K. Lenstra, Niels A. G. M. van Helmond, Thomas Röckmann, Anna J. Wallenius, Paula Dalcin Martins, Annelies J. Veraart, Mike S. M. Jetten, Caroline P. Slomp
Published in: frontiers in marine science, 2023, Page(s) 1-10, ISSN 2296-7745
Publisher: frontiers
DOI: 10.3389/fmars.2023.1085728

Neodymium as Metal Cofactor for Biological Methanol Oxidation: Structure and Kinetics of an XoxF1-Type Methanol Dehydrogenase

Author(s): Rob A. Schmitz, Nunzia Picone, Helena Singer, Andreas Dietl, Kerstin-Anikó Seifert, Arjan Pol, Mike S. M. Jetten, Thomas R. M. Barends, Lena J. Daumann, Huub J. M. Op den Camp
Published in: mBio, Issue 12, 2022, ISSN 2150-7511
Publisher: American Society for Microbiology
DOI: 10.1128/mbio.01708-21

Metascan: METabolic Analysis, SCreening and ANnotation of Metagenomes

Author(s): Geert Cremers; Mike S. M. Jetten; Huub J. M. Op den Camp; Sebastian Lücker
Published in: urn:issn:1664-302X, Issue 5, 2022, Page(s) 1-12, ISSN 2673-7647
Publisher: frontiers
DOI: 10.3389/fbinf.2022.861505

High diversity of nitrifying bacteria and archaea in biofilms from a subsea tunnel

Author(s): Linnea F M Kop, Hanna Koch, Paula Dalcin Martins, Carolina Suarez, Sabina Karačić, Frank Persson, Britt-Marie Wilén, Per Hagelia, Mike S M Jetten, Sebastian Lücker
Published in: FEMS Microbiology Ecology, Issue 101, 2025, ISSN 1574-6941
Publisher: Oxford University Press (OUP)
DOI: 10.1093/femsec/fiaf032

Sediments from a seasonally euxinic coastal ecosystem show high nitrogen cycling potential

Author(s): Isabel M. L. Rigutto, Ştefania C. Sburlan, Lars W. P. de Bont, Tom Berben, Rob M. de Graaf, Caroline P. Slomp, Mike S. M. Jetten
Published in: environmental microbiology, 2025, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1101/2025.02.26.640368

A Novel Laboratory-Scale Mesocosm Setup to Study Methane Emission Mitigation by Sphagnum Mosses and Associated Methanotrophs

Author(s): Martine A. R. Kox, Alfons J. P. Smolders, Daan R. Speth, Leon P. M. Lamers, Huub J. M. Op den Camp, Mike S. M. Jetten, Maartje A. H. J. van Kessel
Published in: Frontiers in Microbiology, Issue 12, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.651103

Seasonal euxinia in a coastal basin: Impact on sedimentary molybdenum enrichments and isotope signatures

Author(s): Olga M. Zygadlowska, Niels A.G.M. van Helmond, Wytze K. Lenstra, Robin Klomp, Rens Accou, Rebecca Puyk, Alexander J. Dickson, Mike S.M. Jetten, Caroline P. Slomp
Published in: Chemical Geology, Issue 670, 2024, Page(s) 122430, ISSN 0009-2541
Publisher: Elsevier BV
DOI: 10.1016/j.chemgeo.2024.122430

Simultaneous Anaerobic and Aerobic Ammonia and Methane Oxidation under Oxygen Limitation Conditions

Author(s): Maartje A. H. J. van Kessel, Karin Stultiens, Arjan Pol, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp
Published in: Applied and Environmental Microbiology, Issue 87/13, 2021, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.00043-21

Structural and functional characterization of the intracellular filament-forming nitrite oxidoreductase multiprotein complex

Author(s): Tadeo Moreno Chicano, Lea Dietrich, Naomi M. de Almeida, Mohd. Akram, Elisabeth Hartmann, Franziska Leidreiter, Daniel Leopoldus, Melanie Mueller, Ricardo Sánchez, Guylaine H. L. Nuijten, Joachim Reimann, Kerstin-Anikó Seifert, Ilme Schlichting, Laura van Niftrik, Mike S. M. Jetten, Andreas Dietl, Boran Kartal, Kristian Parey, Thomas R. M. Barends
Published in: Nature Microbiology, Issue 6/9, 2021, Page(s) 1129-1139, ISSN 2058-5276
Publisher: springer Nature
DOI: 10.1038/s41564-021-00934-8

Probing Denitrifying Anaerobic Methane Oxidation via Antimicrobial Intervention: Implications for Innovative Wastewater Management

Author(s): Martijn Wissink; Martyna Glodowska; Marnix R. van der Kolk; Mike S. M. Jetten; Cornelia U. Welte
Published in: Crossref, Issue 3, 2024, Page(s) 6250–6257, ISSN 2409-7632
Publisher: acs
DOI: 10.1021/acs.est.3c07197

Eutrophication and Deoxygenation Drive High Methane Emissions from a Brackish Coastal System

Author(s): Olga M. Żygadłowska, Florian Roth, Niels A. G. M. van Helmond, Wytze K. Lenstra, Jessica Venetz, Nicky Dotsios, Thomas Röckmann, Annelies J. Veraart, Christian Stranne, Christoph Humborg, Mike S. M. Jetten, Caroline P. Slomp
Published in: Environmental Science & Technology, Issue 58, 2024, Page(s) 10582-10590, ISSN 0013-936X
Publisher: American Chemical Society
DOI: 10.1021/acs.est.4c00702

Metabolic and phylogenetic diversity in the phylum Nitrospinota revealed by comparative genome analyses

Author(s): Linnea F M Kop, Hanna Koch, Mike S M Jetten, Holger Daims, Sebastian Lücker
Published in: ISME Communications, Issue 4, 2024, ISSN 2730-6151
Publisher: Oxford University Press (OUP)
DOI: 10.1093/ismeco/ycad017

A ubiquitous and diverse methanogenic community drives microbial methane cycling in eutrophic coastal sediments

Author(s): Anna J Wallenius, Jessica Venetz, Olga M Zygadlowska, Wytze K Lenstra, Niels A G M van Helmond, Paula Dalcin Martins, Caroline P Slomp, Mike S M Jetten
Published in: FEMS Microbiology Ecology, Issue 101, 2025, ISSN 1574-6941
Publisher: Oxford University Press (OUP)
DOI: 10.1093/femsec/fiaf075

Predicting and improving the microbial removal of organic micropollutants during wastewater treatment: A review

Author(s): Ana B. Rios-Miguel, Tamara J.H.M. van Bergen, Caterina Zillien, Ad M.J. Ragas, Rosalie van Zelm, Mike S.M. Jetten, A. Jan Hendriks, Cornelia U. Welte
Published in: Chemosphere, Issue 333, 2025, Page(s) 138908, ISSN 0045-6535
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.chemosphere.2023.138908

Unraveling Nitrogen, Sulfur, and Carbon Metabolic Pathways and Microbial Community Transcriptional Responses to Substrate Deprivation and Toxicity Stresses in a Bioreactor Mimicking Anoxic Brackish Coastal Sediment Conditions

Author(s): Paula Dalcin Martins, Maider J. Echeveste Medrano†, Arslan Arshad, Julia M. Kurth, Heleen T. Ouboter, Huub J. M. Op den Camp, Mike S. M. Jetten and Cornelia U. Welte*
Published in: frontiers in microbiology, Issue feb 2022, 2022, Page(s) 1-8, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.798906

Regulation of coastal methane sinks by a structured gradient of microbial methane oxidizers

Author(s): Zhanfei He, Jiaqi Wang, Jiajie Hu, Hanqing Yu, Mike S.M. Jetten, Huan Liu, Chaoyang Cai, Yan Liu, Hongxing Ren, Xu Zhang, Miaolian Hua, Xinhua Xu, Ping Zheng, Baolan Hu
Published in: Environmental Pollution, Issue 244, 2019, Page(s) 228-237, ISSN 0269-7491
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.envpol.2018.10.057

Versatile methanotrophs form an active methane biofilter in the oxycline of a seasonally stratified coastal basin

Author(s): Jessica Venetz; Olga M. Żygadłowska; Wytze K. Lenstra; Niels A.G.M. van Helmond; Guylaine H.L. Nuijten; Anna J. Wallenius; Paula Dalcin Martins; Caroline P. Slomp; Mike S.M. Jetten; Annelies J. Veraart
Published in: Environmental Microbiology, 25, 11, pp. 2277-2288, Issue 6, 2023, ISSN 1462-2920
Publisher: ami
DOI: 10.1101/2022.10.28.513710

Benzimidazole fungicide biotransformation by comammox Nitrospira bacteria: Transformation pathways and associated proteomic responses

Author(s): Ping Han, Ana B. Rios-Miguel, Xiufeng Tang, Yaochun Yu, Li-Jun Zhou, Lijun Hou, Min Liu, Dongyao Sun, Mike S.M. Jetten, Cornelia U. Welte, Yujie Men, Sebastian Lücker
Published in: Journal of Hazardous Materials, Issue 445, 2025, Page(s) 130558, ISSN 0304-3894
Publisher: Elsevier BV
DOI: 10.1016/j.jhazmat.2022.130558

Metagenomic evidence of a novel family of anammox bacteria in a subsea environment

Author(s): Carolina Suarez, Paula Dalcin Martins, Mike Jetten, Sabina Karačić, Britt Marie Wilén, Oskar Modin, Per Hagelia, Malte Hermansson, Frank Persson
Published in: environmental microbiology, Issue 1, 2022, Page(s) 1-10, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.16006

Seasonal dynamics of the microbial methane filter in the water column of a eutrophic coastal basin

Author(s): Jessica Venetz, Olga M Żygadłowska, Nicky Dotsios, Anna J Wallenius, Niels A G M van Helmond, Wytze K Lenstra, Robin Klomp, Caroline P Slomp, Mike S M Jetten, Annelies J Veraart
Published in: FEMS Microbiology Ecology, 2024, Page(s) 1-12, ISSN 1574-6941
Publisher: Oxford Academic
DOI: 10.1093/femsec/fiae007

Activity-based labelling of ammonia- and alkane-oxidizing microorganisms including ammonia-oxidizing archaea

Author(s): Sebastian Lücker, Dimitra Sakoula, Arne Schatteman, Pieter Blom, Mike Jetten, Maartje van Kessel, Laura Lehtovirta-Morley
Published in: isme journal, 2024, ISSN 1751-7370
Publisher: Oxford
DOI: 10.21203/rs.3.rs-3237955/v1

Sedimentary vanadium depletion under sulfidic conditions: Implications for (paleo)redox proxy applications

Author(s): Niels A.G.M. van Helmond, Olga M. Żygadłowska, Wytze K. Lenstra, Robin Klomp, Christoph Humborg, Daniel J. Conley, Mike S.M. Jetten, Caroline P. Slomp
Published in: Geochimica et Cosmochimica Acta, Issue 393, 2025, Page(s) 238-253, ISSN 0016-7037
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.gca.2025.01.022

Physiological stress response to sulfide exposure of freshwater anaerobic methanotrophic archaea

Author(s): Maider J. Echeveste Medrano, Sarah Lee, Rob de Graaf, B. Conall Holohan, Irene Sánchez-Andrea, Mike S. M. Jetten, Cornelia U. Welte
Published in: es&t, 2025, ISSN 0013-936X
Publisher: American Chemical Society
DOI: 10.1101/2024.11.08.622618

Contrasting Methane, Sulfide and Nitrogen‐Loading Regimes in Bioreactors Shape Microbial Communities Originating From Methane‐Rich Coastal Sediment of the Stockholm Archipelago

Author(s): Maider J. Echeveste Medrano, Garrett J. Smith, Irene Sánchez‐Andrea, Mike S. M. Jetten, Cornelia U. Welte
Published in: Environmental Microbiology, Issue 27, 2025, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.70056

Selective enrichment and metagenomic analysis of three novel comammox Nitrospira in a urine-fed membrane bioreactor

Author(s): Jiyun Li, Zheng-Shuang Hua, Tao Liu, Chengwen Wang, Jie Li, Ge Bai, Sebastian Lücker, Mike S. M. Jetten, Min Zheng, Jianhua Guo
Published in: ISME Communications, Issue 1/1, 2021, ISSN 2730-6151
Publisher: isme
DOI: 10.1038/s43705-021-00005-3

Autotrophic and mixotrophic metabolism of an anammox bacterium revealed by in vivo 13C and 2H metabolic network mapping

Author(s): Christopher E. Lawson, Guylaine H. L. Nuijten, Rob M. de Graaf, Tyler B. Jacobson, Martin Pabst, David. M. Stevenson, Mike S. M. Jetten, Daniel R. Noguera, Katherine D. McMahon, Daniel Amador-Noguez, Sebastian Lücker
Published in: The ISME Journal, Issue 15/3, 2021, Page(s) 673-687, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-020-00805-w

Comparative genome analysis reveals broad phylogenetic and functional diversity within the order Nitrospirales

Author(s): Linnea F M Kop, Hanna Koch, Daan Speth, Claudia Lüke, Eva Spieck, Mike S M Jetten, Holger Daims, Sebastian Lücker
Published in: The ISME Journal, Issue 19, 2025, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1093/ismejo/wraf151

Gene-Based Modeling of Methane Oxidation in Coastal Sediments: Constraints on the Efficiency of the Microbial Methane Filter

Author(s): Wytze K. Lenstra; Niels A. G. M. van Helmond; Paula Dalcin Martins; Anna J. Wallenius; Mike S. M. Jetten; Caroline P. Slomp
Published in: Environmental Science & Technology, 57, 34, pp. 1-10, Issue 6, 2023, ISSN 1520-5851
Publisher: acs
DOI: 10.1021/acs.est.3c02023

Osmoregulation in freshwater anaerobic methane-oxidizing archaea under salt stress

Author(s): Maider J Echeveste Medrano, Andy O Leu, Martin Pabst, Yuemei Lin, Simon J McIlroy, Gene W Tyson, Jitske van Ede, Irene Sánchez-Andrea, Mike S M Jetten, Robert Jansen, Cornelia U Welte
Published in: The ISME Journal, Issue 18, 2024, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1093/ismejo/wrae137

Mechanisms of extracellular electron transfer in anaerobic methanotrophic archaea

Author(s): Heleen T. Ouboter, Rob Mesman, Tom Sleutels, Jelle Postma, Martijn Wissink, Mike S. M. Jetten, Annemiek Ter Heijne, Tom Berben, Cornelia U. Welte
Published in: Nature communications, 2024, Page(s) 1-12, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-45758-2

Sediments as a Source of Iron, Manganese, Cobalt and Nickel to Continental Shelf Waters (Louisiana, Gulf of Mexico)

Author(s): Wytze K. Lenstra, Niels A. G. M. van Helmond, Olga M. Żygadłowska, Roosmarijn van Zummeren, Rob Witbaard and Caroline P. Slomp
Published in: Frontiers in Marine Sciences, Issue 1, 2022, Page(s) 1-8, ISSN 2296-7745
Publisher: frontiers
DOI: 10.3389/fmars.2022.811953

Trace metals in coastal marine sediments: Natural and anthropogenic sources, correlation matrices, and proxy potentials

Author(s): K. Mareike Paul, Niels A.G.M. van Helmond, Caroline P. Slomp, Tom Jilbert
Published in: Science of The Total Environment, Issue 951, 2024, Page(s) 175789, ISSN 0048-9697
Publisher: Elsevier BV
DOI: 10.1016/j.scitotenv.2024.175789

A sequential extraction procedure for particulate manganese and its application to coastal marine sediments

Author(s): W.K.Lenstra, R. Klomp, F.Molema, T.Behrends,C.P.Slomp
Published in: Chemical Geology, Issue 1, 2021, Page(s) 1-10, ISSN 0009-2541
Publisher: Elsevier BV
DOI: 10.1016/j.chemgeo.2021.120538

Sulfide Toxicity as Key Control on Anaerobic Oxidation of Methane in Eutrophic Coastal Sediments

Author(s): Paula Dalcin Martins, João P. R. C. de Monlevad, Maider J. Echeveste Medrano, Wytze Klaas Lenstra, Anna Julia Wallenius, Martijn Hermans, Caroline P. Slomp, Cornelia Ulrike Welte, Mike S. M. Jetten, Niels A. G. M. van Helmond
Published in: Environmental Science & Technology, Issue 58, 2024, Page(s) 11421-11435, ISSN 0013-936X
Publisher: American Chemical Society
DOI: 10.1021/acs.est.3c10418

Investigating the Chemolithoautotrophic and Formate Metabolism of Nitrospira moscoviensis by Constraint-Based Metabolic Modeling and 13 C-Tracer Analysis

Author(s): Christopher E. Lawson, Aniela B. Mundinger, Hanna Koch, Tyler B. Jacobson, Coty A. Weathersby, Mike S. M. Jetten, Martin Pabst, Daniel Amador-Noguez, Daniel R. Noguera, Katherine McMahon, Sebastian Lücker
Published in: mSystems, Issue 6/4, 2021, ISSN 2379-5077
Publisher: asm
DOI: 10.1128/msystems.00173-21

Enrichment of novel Verrucomicrobia , Bacteroidetes , and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments

Author(s): Paula Dalcin Martins, Anniek Jong, Wytze K. Lenstra, Niels A. G. M. Helmond, Caroline P. Slomp, Mike S. M. Jetten, Cornelia U. Welte, Olivia Rasigraf
Published in: MicrobiologyOpen, Issue 10/1, 2021, ISSN 2045-8827
Publisher: John Wiley and Sons Inc.
DOI: 10.1002/mbo3.1175

Precession-driven variations in phosphorus cycling facilitated Earth’s oxygenation in the early Proterozoic

Author(s): Wytze K. Lenstra, Margriet L. Lantink, Rick Hennekam, Paul R.D. Mason, Gert-Jan Reichart, Frederik J. Hilgen, Caroline P. Slomp
Published in: Chemical Geology, Issue 691, 2025, Page(s) 122857, ISSN 0009-2541
Publisher: Elsevier BV
DOI: 10.1016/j.chemgeo.2025.122857

Methanogenic archaea use a bacteria-like methyltransferase system to demethoxylate aromatic compounds

Author(s): Julia M. Kurth, Masaru K. Nobu, Hideyuki Tamaki, Nadieh de Jonge, Stefanie Berger, Mike S. M. Jetten, Kyosuke Yamamoto, Daisuke Mayumi, Susumu Sakata, Liping Bai, Lei Cheng, Jeppe Lund Nielsen, Yoichi Kamagata, Tristan Wagner, Cornelia U. Welte
Published in: The ISME Journal, 2021, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-021-01025-6

Activity-based labelling of ammonia- and alkane-oxidizing microorganisms including ammonia-oxidizing archaea

Author(s): Dimitra Sakoula, Arne Schatteman, Pieter Blom, Mike S M Jetten, Maartje A H J van Kessel, Laura Lehtovirta-Morley, Sebastian Lücker
Published in: ISME Communications, Issue 4, 2024, ISSN 2730-6151
Publisher: Oxford University Press (OUP)
DOI: 10.1093/ismeco/ycae092

Methane-Dependent Extracellular Electron Transfer at the Bioanode by the Anaerobic Archaeal Methanotroph “Candidatus Methanoperedens”

Author(s): Heleen T. Ouboter, Tom Berben, Stefanie Berger, Mike S. M. Jetten, Tom Sleutels, Annemiek Ter Heijne and Cornelia U. Welte
Published in: frontiers in microbiology, Issue 1, 2022, Page(s) 1-10, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.820989

Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella tundrae Strain T4

Author(s): Martine A. R. Kox, Muhammad Farhan Ul Haque, Theo A. van Alen, Andrew T. Crombie, Mike S. M. Jetten, Huub J. M. Op den Camp, Svetlana N. Dedysh, Maartje A. H. J. van Kessel, J. Colin Murrell
Published in: Microbiology Resource Announcements, Issue 8/20, 2019, Page(s) 1-2, ISSN 2576-098X
Publisher: asm
DOI: 10.1128/mra.00286-19

Anaerobic methanotrophy is stimulated by graphene oxide in a brackish urban canal sediment

Author(s): Koen A. J. Pelsma; Niels A. G. M. van Helmond; Wytze K. Lenstra; Thomas Röckmann; Mike S. M. Jetten; Caroline P. Slomp; Cornelia U. Welte
Published in: environmental microbiology, Issue 2, 2023, Page(s) 3104-3115, ISSN 1462-2920
Publisher: ami
DOI: 10.1111/1462-2920.16501

Simultaneous sulfide and methane oxidation by an extremophile

Author(s): Rob A. Schmitz, Stijn H. Peeters, Sepehr S. Mohammadi, Tom Berben, Timo van Erven, Carmen A. Iosif, Theo van Alen, Wouter Versantvoort, Mike S. M. Jetten, Huub J. M. Op den Camp & Arjan Pol
Published in: Nature communications, 2023, Page(s) 1-10, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-38699-9

Anthropogenic and Environmental Constraints on the Microbial Methane Cycle in Coastal Sediments

Author(s): Anna J. Wallenius, Paula Dalcin Martins, Caroline P. Slomp, Mike S. M. Jetten
Published in: Frontiers in Microbiology, Issue 12, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.631621

Seasonal dynamics of nitrification in the water column of marine Lake Grevelingen

Author(s): Nicky Dotsios, Jessica Venetz, Olga M. Zygadlowska, Wytze K. Lenstra, Niels A.G.M. van Helmond, Anna J. Wallenius, Robin Klomp, Caroline P. Slomp, Mike S.M. Jetten, Maartje A.H.J. van Kessel, Sebastian Lücker
Published in: 2025
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.06.29.662106

Mini-bacterioferritins: Structural insight into a new type of ferritin-like protein from an anaerobic methane-oxidising archaeon

Author(s): Martijn Wissink, Sylvain Engilberge, Pedro Leão, Robert S. Jansen, Mike S. M. Jetten, Antoine Royant, Cornelia U. Welte, Tristan Wagner
Published in: 2025
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.06.06.658376

Long-term euxinia hinders microbial ammonium removal in brackish coastal waters

Author(s): Nicky Dotsios, Lina Piso, Jessica Venetz, Olga M. Żygadłowska, Niels A.G.M. van Helmond, Wytze K. Lenstra, Claudia Frey, Alessandra Mazzoli, Moritz F. Lehmann, Florian Roth, Christian Stranne, Christoph Humborg, Tom Berben, Pedro E. Leão, Maartje A.H.J. van Kessel, Sebastian Lücker, Mike S.M. Jetten, Caroline P. Slomp
Published in: 2025
Publisher: Cold Spring Harbor Laboratory
DOI: 10.1101/2025.06.30.662269

Unraveling nitrogen, sulfur and carbon metabolic pathways and microbial community transcriptional responses to substrate deprivation and toxicity stresses in a bioreactor mimicking anoxic brackish coastal sediment conditions

Author(s): Paula Dalcin Martins, Maider J. Echeveste, Arslan Arshad, Julia Kurth, Heleen Ouboter, Mike S. M. Jetten, Cornelia U. Welte
Published in: BiorXiv, 2021, ISSN 2692-8205
Publisher: cold spring harbor lab
DOI: 10.1101/2021.08.31.458400

Biogeochemical drivers of microbial methane removal in eutrophic coastal waters

Author(s): Venetz, J.
Published in: Issue 2, 2024, ISBN 9789464962406
Publisher: Radboud university

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