Methane and Ammonium Removal In redoX transition zones

Project Information

MARIX

Grant agreement ID: 854088

DOI

10.3030/854088

EC signature date 5 February 2020

Start date 1 March 2020

End date 31 August 2027

Funded under

• EXCELLENT SCIENCE - European Research Council (ERC)

Total cost

€ 7 610 000,00

EU contribution

€ 7 610 000,00

Coordinated by

STICHTING RADBOUD UNIVERSITEIT
Netherlands

CORDIS provides links to public deliverables and publications of HORIZON projects.

Links to deliverables and publications from FP7 projects, as well as links to some specific result types such as dataset and software, are dynamically retrieved from OpenAIRE .

Publications

Peer reviewed articles (34)

Sedimentary molybdenum and uranium: Improving proxies for deoxygenation in coastal depositional environments

Author(s): K. Mareike Paul, NIels A.G.M. van Helmond, Caroline P. Slomp, Sami A. Jokinen, Joonas J. Virtasal, Helena L. Filipsson, Tom Jilbert
Published in: Chemical Geology, Issue 651, 2023, ISSN 0346-251X
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.chemgeo.2022.121203

Nitrate Leaching and its Implication for Fe and as Mobility in a Southeast Asian Aquifer

Author(s): Martyna Glodowska; Yinxiao Ma; Garrett Smith; Andreas Kappler; Mike Jetten; Cornelia U. Welte
Published in: FEMS Microbiology Ecology, Issue 1, 2023, Page(s) 1-10, ISSN 1574-6941
Publisher: Oxford
DOI: 10.2139/ssrn.4255499

Amsterdam urban canals contain novel niches for methane-cycling microorganisms

Author(s): Pelsma, Koen A.J. Zandt, M.H. in 't Camp, Huub J.M. Op den Jetten, Mike S.M. Dean, J.F. Welte, C.U.
Published in: environmental microbiology, Issue 24, 2022, Page(s) 82-97, ISSN 1462-2920
Publisher: ami
DOI: 10.1111/1462-2920.15864

Effects of redox variability and early diagenesis on marine sedimentary Hg records

Author(s): J. Frieling, T.A. Mather, C. Marz, H.C. Jenkyns, R. Hennekam, G.-j.Reichart C. P. Slomp, N.A.G.M. van Helmond
Published in: Geochimica et Cosmochimica Acta, Issue 351, 2023, Page(s) 78-95, ISSN 0346-251X
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.gca.2023.04.015

Characterization of a nitrite-reducing octaheme hydroxylamine oxidoreductase that lacks the tyrosine cross-link

Author(s): Christina Ferousi, Rob A. Schmitz, Wouter J. Maalcke, Simon Lindhoud, Wouter Versantvoort, Mike S.M. Jetten, Joachim Reimann, Boran Kartal
Published in: Journal of Biological Chemistry, Issue 296, 2021, Page(s) 100476, ISSN 0021-9258
Publisher: American Society for Biochemistry and Molecular Biology Inc.
DOI: 10.1016/j.jbc.2021.100476

Novel and unusual genes for nitrogen and metal cycling in <i>Planctomycetota</i>- and KSB1-affiliated metagenome-assembled genomes reconstructed from a marine subsea tunnel

Author(s): Carolina Suarez; Thomas Hackl; Britt-Marie Wilen; Frank Persson; Per Hagelia; Mike S M Jetten; Paula Dalcin Martins
Published in: FEMS Microbiology Letters, 370, pp. 1-10, Issue 5, 2022, Page(s) 1-10, ISSN 1574-6968
Publisher: fems
DOI: 10.1093/femsle/fnad049

Methanotrophic potential of Dutch canal wall biofilms is driven by <i>Methylomonadaceae</i>

Author(s): Koen A J Pelsma; Daniël A M Verhagen; Joshua F Dean; Mike S M Jetten; Cornelia U Welte
Published in: FEMS Microbiology Ecology, 99, 10, pp. 1-9, Issue 2, 2023, Page(s) 1-9, ISSN 1574-6941
Publisher: Oxford
DOI: 10.1093/femsec/fiad110

Methanethiol Consumption and Hydrogen Sulfide Production by the Thermoacidophilic Methanotroph Methylacidiphilum fumariolicum SolV

Author(s): Rob A. Schmitz; Sepehr S. Mohammadi; Timo van Erven; Tom Berben; Mike S. M. Jetten; Arjan Pol; Huub J. M. Op den Camp
Published in: frontiers in microbiology, Issue 5, 2022, Page(s) 1-10, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.857442

Microbial activity, methane production, and carbon storage in Early Holocene North Sea peats

Author(s): Lippmann, T.J.R., M.H. in ’t Zandt, N.N.L. van der Putten, F.S. Busshers, M.P. Hijma, P. van der Velden, T. de Groot, Z. van Aalderen, O.H. Meisel, C.P. Slomp, H. Niemann, M.S.M. Jetten, H.A.J. Dolman, C.U. Welte
Published in: Biogeosciences, Issue 18, 2021, Page(s) 5491-5511, ISSN 1726-4170
Publisher: European Geosciences Union (EGU).
DOI: 10.5194/bg-18-5491-2021

Pathways of methane removal in the sediment and water column of a seasonally anoxic eutrophic marine basin

Author(s): Olga M. Żygadłowska, Jessica Venetz Robin Klomp, Wytze K. Lenstra, Niels A. G. M. van Helmond, Thomas Röckmann, Anna J. Wallenius, Paula Dalcin Martins, Annelies J. Veraart, Mike S. M. Jetten, Caroline P. Slomp
Published in: frontiers in marine science, 2023, Page(s) 1-10, ISSN 2296-7745
Publisher: frontiers
DOI: 10.3389/fmars.2023.1085728

Metascan: METabolic Analysis, SCreening and ANnotation of Metagenomes

Author(s): Geert Cremers; Mike S. M. Jetten; Huub J. M. Op den Camp; Sebastian Lücker
Published in: urn:issn:1664-302X, Issue 5, 2022, Page(s) 1-12, ISSN 2673-7647
Publisher: frontiers
DOI: 10.3389/fbinf.2022.861505

A Novel Laboratory-Scale Mesocosm Setup to Study Methane Emission Mitigation by Sphagnum Mosses and Associated Methanotrophs

Author(s): Martine A. R. Kox, Alfons J. P. Smolders, Daan R. Speth, Leon P. M. Lamers, Huub J. M. Op den Camp, Mike S. M. Jetten, Maartje A. H. J. van Kessel
Published in: Frontiers in Microbiology, Issue 12, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.651103

Simultaneous Anaerobic and Aerobic Ammonia and Methane Oxidation under Oxygen Limitation Conditions

Author(s): Maartje A. H. J. van Kessel, Karin Stultiens, Arjan Pol, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp
Published in: Applied and Environmental Microbiology, Issue 87/13, 2021, ISSN 0099-2240
Publisher: American Society for Microbiology
DOI: 10.1128/aem.00043-21

Structural and functional characterization of the intracellular filament-forming nitrite oxidoreductase multiprotein complex

Author(s): Tadeo Moreno Chicano, Lea Dietrich, Naomi M. de Almeida, Mohd. Akram, Elisabeth Hartmann, Franziska Leidreiter, Daniel Leopoldus, Melanie Mueller, Ricardo Sánchez, Guylaine H. L. Nuijten, Joachim Reimann, Kerstin-Anikó Seifert, Ilme Schlichting, Laura van Niftrik, Mike S. M. Jetten, Andreas Dietl, Boran Kartal, Kristian Parey, Thomas R. M. Barends
Published in: Nature Microbiology, Issue 6/9, 2021, Page(s) 1129-1139, ISSN 2058-5276
Publisher: springer Nature
DOI: 10.1038/s41564-021-00934-8

Probing Denitrifying Anaerobic Methane Oxidation via Antimicrobial Intervention: Implications for Innovative Wastewater Management

Author(s): Martijn Wissink; Martyna Glodowska; Marnix R. van der Kolk; Mike S. M. Jetten; Cornelia U. Welte
Published in: Crossref, Issue 3, 2024, Page(s) 6250–6257, ISSN 2409-7632
Publisher: acs
DOI: 10.1021/acs.est.3c07197

Unraveling Nitrogen, Sulfur, and Carbon Metabolic Pathways and Microbial Community Transcriptional Responses to Substrate Deprivation and Toxicity Stresses in a Bioreactor Mimicking Anoxic Brackish Coastal Sediment Conditions

Author(s): Paula Dalcin Martins, Maider J. Echeveste Medrano†, Arslan Arshad, Julia M. Kurth, Heleen T. Ouboter, Huub J. M. Op den Camp, Mike S. M. Jetten and Cornelia U. Welte*
Published in: frontiers in microbiology, Issue feb 2022, 2022, Page(s) 1-8, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.798906

Regulation of coastal methane sinks by a structured gradient of microbial methane oxidizers

Author(s): Zhanfei He, Jiaqi Wang, Jiajie Hu, Hanqing Yu, Mike S.M. Jetten, Huan Liu, Chaoyang Cai, Yan Liu, Hongxing Ren, Xu Zhang, Miaolian Hua, Xinhua Xu, Ping Zheng, Baolan Hu
Published in: Environmental Pollution, Issue 244, 2019, Page(s) 228-237, ISSN 0269-7491
Publisher: Pergamon Press Ltd.
DOI: 10.1016/j.envpol.2018.10.057

Versatile methanotrophs form an active methane biofilter in the oxycline of a seasonally stratified coastal basin

Author(s): Jessica Venetz; Olga M. Żygadłowska; Wytze K. Lenstra; Niels A.G.M. van Helmond; Guylaine H.L. Nuijten; Anna J. Wallenius; Paula Dalcin Martins; Caroline P. Slomp; Mike S.M. Jetten; Annelies J. Veraart
Published in: Environmental Microbiology, 25, 11, pp. 2277-2288, Issue 6, 2023, ISSN 1462-2920
Publisher: ami
DOI: 10.1101/2022.10.28.513710

Metagenomic evidence of a novel family of anammox bacteria in a subsea environment

Author(s): Carolina Suarez, Paula Dalcin Martins, Mike Jetten, Sabina Karačić, Britt Marie Wilén, Oskar Modin, Per Hagelia, Malte Hermansson, Frank Persson
Published in: environmental microbiology, Issue 1, 2022, Page(s) 1-10, ISSN 1462-2912
Publisher: Blackwell Publishing Inc.
DOI: 10.1111/1462-2920.16006

Seasonal dynamics of the microbial methane filter in the water column of a eutrophic coastal basin

Author(s): Jessica Venetz, Olga M Żygadłowska, Nicky Dotsios, Anna J Wallenius, Niels A G M van Helmond, Wytze K Lenstra, Robin Klomp, Caroline P Slomp, Mike S M Jetten, Annelies J Veraart
Published in: FEMS Microbiology Ecology, 2024, Page(s) 1-12, ISSN 1574-6941
Publisher: Oxford Academic
DOI: 10.1093/femsec/fiae007

Selective enrichment and metagenomic analysis of three novel comammox Nitrospira in a urine-fed membrane bioreactor

Author(s): Jiyun Li, Zheng-Shuang Hua, Tao Liu, Chengwen Wang, Jie Li, Ge Bai, Sebastian Lücker, Mike S. M. Jetten, Min Zheng, Jianhua Guo
Published in: ISME Communications, Issue 1/1, 2021, ISSN 2730-6151
Publisher: isme
DOI: 10.1038/s43705-021-00005-3

Autotrophic and mixotrophic metabolism of an anammox bacterium revealed by in vivo 13C and 2H metabolic network mapping

Author(s): Christopher E. Lawson, Guylaine H. L. Nuijten, Rob M. de Graaf, Tyler B. Jacobson, Martin Pabst, David. M. Stevenson, Mike S. M. Jetten, Daniel R. Noguera, Katherine D. McMahon, Daniel Amador-Noguez, Sebastian Lücker
Published in: The ISME Journal, Issue 15/3, 2021, Page(s) 673-687, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-020-00805-w

Gene-Based Modeling of Methane Oxidation in Coastal Sediments: Constraints on the Efficiency of the Microbial Methane Filter

Author(s): Wytze K. Lenstra; Niels A. G. M. van Helmond; Paula Dalcin Martins; Anna J. Wallenius; Mike S. M. Jetten; Caroline P. Slomp
Published in: Environmental Science & Technology, 57, 34, pp. 1-10, Issue 6, 2023, ISSN 1520-5851
Publisher: acs
DOI: 10.1021/acs.est.3c02023

Mechanisms of extracellular electron transfer in anaerobic methanotrophic archaea

Author(s): Heleen T. Ouboter, Rob Mesman, Tom Sleutels, Jelle Postma, Martijn Wissink, Mike S. M. Jetten, Annemiek Ter Heijne, Tom Berben, Cornelia U. Welte
Published in: Nature communications, 2024, Page(s) 1-12, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-024-45758-2

Sediments as a Source of Iron, Manganese, Cobalt and Nickel to Continental Shelf Waters (Louisiana, Gulf of Mexico)

Author(s): Wytze K. Lenstra, Niels A. G. M. van Helmond, Olga M. Żygadłowska, Roosmarijn van Zummeren, Rob Witbaard and Caroline P. Slomp
Published in: Frontiers in Marine Sciences, Issue 1, 2022, Page(s) 1-8, ISSN 2296-7745
Publisher: frontiers
DOI: 10.3389/fmars.2022.811953

A sequential extraction procedure for particulate manganese and its application to coastal marine sediments

Author(s): W.K.Lenstra, R. Klomp, F.Molema, T.Behrends,C.P.Slomp
Published in: Chemical Geology, Issue 1, 2021, Page(s) 1-10, ISSN 0009-2541
Publisher: Elsevier BV
DOI: 10.1016/j.chemgeo.2021.120538

Investigating the Chemolithoautotrophic and Formate Metabolism of Nitrospira moscoviensis by Constraint-Based Metabolic Modeling and 13 C-Tracer Analysis

Author(s): Christopher E. Lawson, Aniela B. Mundinger, Hanna Koch, Tyler B. Jacobson, Coty A. Weathersby, Mike S. M. Jetten, Martin Pabst, Daniel Amador-Noguez, Daniel R. Noguera, Katherine McMahon, Sebastian Lücker
Published in: mSystems, Issue 6/4, 2021, ISSN 2379-5077
Publisher: asm
DOI: 10.1128/msystems.00173-21

Enrichment of novel Verrucomicrobia , Bacteroidetes , and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments

Author(s): Paula Dalcin Martins, Anniek Jong, Wytze K. Lenstra, Niels A. G. M. Helmond, Caroline P. Slomp, Mike S. M. Jetten, Cornelia U. Welte, Olivia Rasigraf
Published in: MicrobiologyOpen, Issue 10/1, 2021, ISSN 2045-8827
Publisher: John Wiley and Sons Inc.
DOI: 10.1002/mbo3.1175

Methanogenic archaea use a bacteria-like methyltransferase system to demethoxylate aromatic compounds

Author(s): Julia M. Kurth, Masaru K. Nobu, Hideyuki Tamaki, Nadieh de Jonge, Stefanie Berger, Mike S. M. Jetten, Kyosuke Yamamoto, Daisuke Mayumi, Susumu Sakata, Liping Bai, Lei Cheng, Jeppe Lund Nielsen, Yoichi Kamagata, Tristan Wagner, Cornelia U. Welte
Published in: The ISME Journal, 2021, ISSN 1751-7362
Publisher: Nature Publishing Group
DOI: 10.1038/s41396-021-01025-6

Methane-Dependent Extracellular Electron Transfer at the Bioanode by the Anaerobic Archaeal Methanotroph “Candidatus Methanoperedens”

Author(s): Heleen T. Ouboter, Tom Berben, Stefanie Berger, Mike S. M. Jetten, Tom Sleutels, Annemiek Ter Heijne and Cornelia U. Welte
Published in: frontiers in microbiology, Issue 1, 2022, Page(s) 1-10, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2022.820989

Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella tundrae Strain T4

Author(s): Martine A. R. Kox, Muhammad Farhan Ul Haque, Theo A. van Alen, Andrew T. Crombie, Mike S. M. Jetten, Huub J. M. Op den Camp, Svetlana N. Dedysh, Maartje A. H. J. van Kessel, J. Colin Murrell
Published in: Microbiology Resource Announcements, Issue 8/20, 2019, Page(s) 1-2, ISSN 2576-098X
Publisher: asm
DOI: 10.1128/mra.00286-19

Anaerobic methanotrophy is stimulated by graphene oxide in a brackish urban canal sediment

Author(s): Koen A. J. Pelsma; Niels A. G. M. van Helmond; Wytze K. Lenstra; Thomas Röckmann; Mike S. M. Jetten; Caroline P. Slomp; Cornelia U. Welte
Published in: environmental microbiology, Issue 2, 2023, Page(s) 3104-3115, ISSN 1462-2920
Publisher: ami
DOI: 10.1111/1462-2920.16501

Simultaneous sulfide and methane oxidation by an extremophile

Author(s): Rob A. Schmitz, Stijn H. Peeters, Sepehr S. Mohammadi, Tom Berben, Timo van Erven, Carmen A. Iosif, Theo van Alen, Wouter Versantvoort, Mike S. M. Jetten, Huub J. M. Op den Camp & Arjan Pol
Published in: Nature communications, 2023, Page(s) 1-10, ISSN 2041-1723
Publisher: Nature Publishing Group
DOI: 10.1038/s41467-023-38699-9

Anthropogenic and Environmental Constraints on the Microbial Methane Cycle in Coastal Sediments

Author(s): Anna J. Wallenius, Paula Dalcin Martins, Caroline P. Slomp, Mike S. M. Jetten
Published in: Frontiers in Microbiology, Issue 12, 2021, ISSN 1664-302X
Publisher: Frontiers Media
DOI: 10.3389/fmicb.2021.631621