One of the main questions in this project is to explore the role and the relative contribution of brain's immune and neural systems to disease development. While Alzheimer’s disease (AD) was initially believed to be a neuron-centric neurodegenerative disease, accumulating genetic and functional evidence, along with the chronic neuroinflammation phenotype, indicates that the brain’s resident immune cells, called microglia, play an active role in AD pathogenesis. To investigate these cellular interactions, we focused first on developing the model system, where we established and characterized a human-specific immunocompetent brain organoids system derived from induced pluripotent stem cells (iPSCs). This collaborative study, published in Cell (Schafer*, Mansour*, et al. 2023), provides a novel model system to investigate neuroinflammatory mechanisms underlying AD and elucidate disease-associated microglia/neuronal phenotypes contributing to the disease. We are currently utilizing this platform together with CRISPR/Cas9-edited iPSCs cell lines to assess the molecular and cellular mechanisms that govern the contribution of microglia to AD.