OrganVision: Technology for real-time visualizing and modelling of fundamental process in living organoids towards new insights into organ-specific health, disease, and recovery

SAM for Robust Mitochondria Instance Segmentation in Fluorescence Microscopy

Autores: Jadhav, S., Prasad, D. K., & Agarwal, K.
Publicado en: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2026
Editor: IEEE

Faster and deeper laser materials processing with ultrasound

Autores: Marti Duocastella
Publicado en: The 9th International Congress on Laser Advanced Materials Processing, LAMP 2025, 2025
Editor: LAMP

Engineered heart tissue with a pharmacological off-switch as a tool to study theinfluence of cardiac work on cardiomyocyte maturation

Autores: Rajiven Srikantharajah, Tim Stüdemann, Christoph Manthey, Thomas Eschenhagen, Florian Weinberger
Publicado en: 2022, Página(s) The submissions were abstract only and are open access.
Editor: ISHR World Congress

Forward modeling of mesoscopic imaging with radiative transfer equation

Autores: Y. Qin, Y. Zhong, and K. Agarwal
Publicado en: Focus on Microscopy, 2025
Editor: Focus on Microscopy

Transplanted iPSC-derived cardiomyocytes actively contribute to left ventricular function

Autores: Tim Stüdemann, Judith Rössinger, Christoph Manthey, Birgit Geertz, Rajiven Srikantharajah, Constantin von Bibra, Aya Shibamiya, Maria Köhne, Antonius Wiehler, J. Simon Wiegert, Thomas Eschenhagen, Florian Weinberger
Publicado en: 2022, Página(s) The submissions were abstract only and are open access.
Editor: ISHR World Congress

Adaption of Subspace Based Optimization Method for Dark Field Microscopy Data

Autores: Yingying Qin, Ankit Butola, Krishna Agarwal
Publicado en: 2024 IEEE International Symposium on Antennas and Propagation and INC/USNC‐URSI Radio Science Meeting (AP-S/INC-USNC-URSI), 2024, Página(s) 927-928
Editor: IEEE
DOI: 10.1109/ap-s/inc-usnc-ursi52054.2024.10685990

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autores: Florian Weinberger
Publicado en: ICGEB, Seminar Series, 2025
Editor: ICGEB

THE TRANSLATIONAL PATH TO HEART REGENERATION: GENETIC APPROACHES

Autores: Florian Weinberger
Publicado en: 2022
Editor: CNIC Regeneration Symposium

Development of multimodal Rayleigh light-sheet and Frequency-encoded Microscopy for label-free chemical imaging of highly dynamic biological systems

Autores: D. Bhattacharya, A. Courtier, A. Rowlings, S. Lane, Laura Rodríguez, B. Creith, M. Duocastella, S. Mahajan
Publicado en: 2025, 2025
Editor: Focus on Microscopy

Practical challenges in inverse scattering for RI reconstruction with label-free coherent microscopy

Autores: Yingying Qin
Publicado en: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Editor: PIERS

The design space of RI reconstruction for label-free optical microscopy

Autores: Y. Huang, Y. Qin, Y. Zhong and K. Agarwal
Publicado en: Bioscopy Conference, 2026
Editor: UiT The Arctic University of Norway

Engineered heart tissue and optogenetics – a powerful and versatile combination

Autores: Karl-Felix Müller, Bangfen Pan, Julius Hansen, Julia Krause, Grit Höppner, Tim Stüdemann, Ingke Braren, Florian Weinberger, Arne Hansen, Christine E. Gee, Torsten Christ, Thomas Eschenhagen, Justus Stenzig
Publicado en: 2022, Página(s) The submissions were abstract only and are open access.
Editor: ISHR World Congress

Artificial intelligence solution for microscopy and nanoscopy

Autores: Krishna Agarwal
Publicado en: CEDAS Conference, Edición No abstracts was asked., 2021
Editor: University of Bergen

Haphazard Inputs as Images in Online Learning

Autores: Rohit Agarwal, Aryan Dessai, Arif Ahmed Sekh, Krishna Agarwal, Alexander Horsch, Dilip K. Prasad
Publicado en: 2025 International Joint Conference on Neural Networks (IJCNN), 2025, Página(s) 1-9
Editor: IEEE
DOI: 10.1109/ijcnn64981.2025.11228356

3D refractive index imaging from coherent label-free microscopy: inverse scattering reconstruction and the influence of illumination modes

Autores: Yingying Qin, Krishna Agarwal
Publicado en: Quantitative Phase Imaging XII, 2026, Página(s) 44
Editor: SPIE
DOI: 10.1117/12.3079110

Tissue Engineering und Stammzellen am Herz

Autores: Florian Weinberger
Publicado en: Annual meeting German Transplantation Society, 2022
Editor: Annual meeting German Transplantation Society

Computational PSF Estimation Enables Aberration-Free Deconvolution

Autores: F. Niknam, K. Agarwal
Publicado en: Focus on Microscopy 2025, 2025
Editor: Focus on Microscopy

Ultrasound-enabled light focusing for enhanced laser materials processing

Autores: Marti Duocastella
Publicado en: COLA 2024, 17th International Conference on Laser Ablation, 2024
Editor: MITOS S.A.

Biomimetic hydrogel topology facilitates cell plasticity via actin remodeling to modulate cell motility: A multimodal optical imaging-based evaluation

Autores: Ghosh, B. and Agarwal
Publicado en: TERMIS 2025, 2025
Editor: TERMIS

Computational Microscopy

Autores: Krishna Agarwal
Publicado en: Bioscopy Conference, 2026
Editor: UiT

Blind reconstruction of challenging raw data outperforms commercial 3DSIM

Autores: I.S. Opstad, S. Acuña, S. Ströhl, F. Ströhl, B.S. Ahluwalia, K. Agarwal
Publicado en: 2023
Editor: Focus on Microscopy

Monitoring mitochondria turnover and transfer in cardiac cells

Autores: Åsa B. Birgisdottir
Publicado en: Bioscopy Conference, 2026
Editor: UiT

Laser additive fabrication of tailored micro-optics

Autores: Marti Duocastella, Ernest Martí-Jerez, Salvatore Surdo
Publicado en: Proceedings Volume PC11989, Laser-based Micro- and Nanoprocessing XVI, 2022, Página(s) The submissions are abstract only and open access. The videos of talks are on demand.
Editor: SPIE
DOI: 10.1117/12.2608835

MUSICAL – a versatile super-resolution microscopy solution for gentle imaging of physical characteristics of biological samples

Autores: Sebastian Acuña and Krishna Agarwal
Publicado en: 2023
Editor: 4th International Conference On Optics, Photonics, And Lasers (OPL-2023)

Illumination Mode Effects in Three-dimensional Inverse Scattering for Label-free Optical Imaging

Autores: Y. Qin, Y. Zhong and K. Agarwal
Publicado en: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Editor: PIERS

Reconstruction of Objects at Cell Scale from Microscope Images with Inverse Scattering Algorithm

Autores: Yingying Qin, Yu Zhong, Krishna Agarwal
Publicado en: 2025 International Conference on Electromagnetics in Advanced Applications (ICEAA), 2025, Página(s) 0314-0314
Editor: IEEE
DOI: 10.1109/iceaa65662.2025.11305969

How optical microscopes can shape the future of nanoscience

Autores: Marti Duocastella
Publicado en: Capita Selecta 2025-2026, 2026
Editor: KU Lueven

NorViVQA: Visual Question Answering for Visually Impaired in Norwegian Language

Autores: Pal, R., Kar, S., & Prasad, D. K.
Publicado en: Proceedings of the Symposium of the Norwegian AI Society 2025, 2025
Editor: Norwegian AI Society

Adaptation and performance of well-known non-linear inverse solvers in optical microscopy

Autores: Yingying Qin, Ankit Butola, Krishna Agarwal
Publicado en: 2024 IEEE International Symposium on Antennas and Propagation and INC/USNC‐URSI Radio Science Meeting (AP-S/INC-USNC-URSI), 2024, Página(s) 1147-1148
Editor: IEEE
DOI: 10.1109/ap-s/inc-usnc-ursi52054.2024.10687253

MUSICAL: a family of computational techniques for fluorescence nanoscopy

Autores: Sebastian Acuña and Krishna Agarwal
Publicado en: Focus on Microscopy 2023, 2023
Editor: Focus on Microscopy

3D refractive index reconstruction from phaseless coherent label-free imaging

Autores: Y. Qin, A. Butola, Y. Zhong, and K. Agarwal
Publicado en: Focus on Microscopy 2025, 2025
Editor: Focus on Microscopy

Forward and Inverse Modeling of Mesoscopic Optical Microscopy Using the Radiative Transfer Equation

Autores: Y. Qin, K. Agarwal and Y. Zhong
Publicado en: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Editor: PIERS

Computational Adaptive Optics for Thick Tissue Microscopy via Linear Bayesian Modeling of Anisotropic Scattering

Autores: F. Niknam, K. Agarwal
Publicado en: Focus on Microscopy 2026, 2026
Editor: Focus on Microscopy

Shape based forward solver for multi-nested body in label-free microscopy

Autores: Y. Huang, Y. Qin and K. Agarwal
Publicado en: Focus on Microscopy, 2025
Editor: Focus on Microscopy

Fast and High-Fidelity Deconvolution Enabled by Modified Richardson-Lucy Algorithm

Autores: F. Niknam, K. Agarwal
Publicado en: Focus on Microscopy 2025, 2025
Editor: Focus on Microscopy

Live measurement of cancer cell motility and plasticity by label-free imaging of intracellular actin dynamics using gradient light interference microscopy

Autores: Ghosh, B. and Agarwal
Publicado en: Focus on Microscopy 2025, 2025
Editor: Focus on Microscopy

MUSI-tAF: autofluorescence-based super-resolution of collagen fibrils in fixed tissues for density estimation

Autores: B. Ghosh, S. Acuña, K. Agarwal
Publicado en: 2023
Editor: Focus on Microscopy

Pluripotent stem cell-based heart repair

Autores: Florian Weinberger
Publicado en: TRON, Translational Oncology, curATalk Seminar Series, 2024
Editor: TRON

Preliminary Test Study on RI Reconstruction Performance with Label-free Microscope Data by Inverse Scattering Algorithms

Autores: Y. Qin, A. Butola, and K. Agarwal
Publicado en: Photonics & Electromagnetics Research Symposium (PIERS 2024), 2024
Editor: PIERS

MUS-CARS: development of a computational resolution enhancement towards label-free chemical imaging

Autores: D. Bhattacharya, D. Lamparte, K. Agarwal, S. Willaime-Morawek, S. Mahajan
Publicado en: Focus on Microscopy 2026, 2026
Editor: Focus on Microscopy

Contractile force of transplanted cardiomyocytes actively supports heartfunction after injury

Autores: Florian Weinberger
Publicado en: 2023
Editor: German Cardiac Society

A simple and flexible platform for optogenetic pacing in cardiac tissue engineering

Autores: Bangfen Pan, Julius Hansen, Tim Stüdemann, Florian Weinberger, Thomas Eschenhagen, Justus Stenzig
Publicado en: 2022, Página(s) The submissions were abstract only and are open access.
Editor: ISHR World Congress

Evaluating LLM-as-a-Judge for Medical Term Simplification

Autores: Buhnila, I., Sinha, A., Agarwal, R., Prasad, D. K., & Constant, M
Publicado en: ACL BioNLP, 2026
Editor: ACL

Toward faster and deeper optical microscopes by combining ultrasound with light

Autores: Marti Duocastella
Publicado en: 2023
Editor: Spanish and Portuguese Advanced Optical Meeting (SPAOM)

OrganVision - Nanoscopic window into the life of heart

Autores: Giulia De Poli, Krishna Agarwal
Publicado en: 2022
Editor: AI4future

Inverse scattering based 3D refractive index imaging: modeling, reconstruction and illumination effects

Autores: Y. Qin and K. Agarwal
Publicado en: XXXVIth URSI General Assembly and Scientific Symposium (URSI GASS 2026), 2026
Editor: URSI

Physics-guided Loss Functions Impact Performance of Deep-learning-based Inverse-scattering-problem Solver

Autores: K. Agarwal, Z. Liu, M. Roy, D. K. Prasad
Publicado en: 2023
Editor: Photonics and Electromagnetics Research Symposium (PIERS)

Stem cell-derived cardiomyocyte transplantation – pharmacological considerations

Autores: Florian Weinberger
Publicado en: ISHR World Congress, 2022
Editor: ISHR

Challenges and Role of Federated Learning in Microscopy Data Analysis

Autores: A. A. Sekh
Publicado en: Bioscopy Conference, 2026
Editor: UiT The Arctic University of Norway

Acousto-Optic Light Engineering for High-Speed Microscopy

Autores: Martí Duocastella
Publicado en: 2022
Editor: Frontiers in Lasers and Applications

Encoded light for high-speed optical microscopy

Autores: Marti Duocastella
Publicado en: 12th International Weber Symposium, 2025
Editor: Istituto Italiano di Tecnologia

Human engineered heart tissue transplantation in a guinea pig chronic injury model

Autores: Florian Weinberger
Publicado en: 2023
Editor: International Society for Heart Research

Acousto-Optic Deflector–Based Structured Illumination and Frequency-Encoded Multiphoton Microscopy for Scanless Imaging of Biological Tissues

Autores: Martin Skorsetz, Aisada König, Grzegorz Rieger, Martí Duocastella, Karsten König
Publicado en: Focus on Microscopy 2026, 2026
Editor: Focus on Microscopy

Generative Adversarial Networks for Virtual Fluorescent Staining

Autores: Lorenzo Venieri
Publicado en: 24th International Conference on Group Decision and Negotiation, 2024
Editor: 24th International Conference on Group Decision and Negotiation

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autores: R. Agarwal, G. Das, S. Aggarwal, A. Horsch, D.K. Prasad
Publicado en: IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2023
Editor: IEEE
DOI: 10.1109/icassp49357.2023.10094987

On Generalization of 3D Generative Models

Autores: Bhansal, Arushika, Abhinanda Ranjit Punnakkal, and Dilip K. Prasad
Publicado en: AAI Workshop 2025, 2025
Editor: AAI Workshop 2025

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autores: Florian Weinberger
Publicado en: NIH PCTC Cardiovascular Bioengineering Symposium, 2025
Editor: NIH

Adaptation of Inverse Scattering Algorithms for 3D Refractive Index Reconstruction with Coherent Label-free Microscope Data

Autores: Y. Qin, A. Butola, and K. Agarwal
Publicado en: Photonics & Electromagnetics Research Symposium PIERS 2024, 2024
Editor: PIERS

Deep imaging in scattering media using ultrasonic endoscopes

Autores: Marti Duocastella
Publicado en: Bioscopy Conference, 2026
Editor: UiT

Pluripotent stem cell-based heart repair

Autores: Florian Weinberger
Publicado en: Cardioascona 2024, 2024
Editor: Ascona

Analysing the interaction between cardiomyocyte work and cell-cycle with human stem cell derived engineered heart tissue

Autores: Nancy Shehata
Publicado en: Cardiovascular Bioengineering Symposium, 2025
Editor: Cardiovascular Bioengineering Symposium

The quest for the perfect microscope: fast, label-free and deep

Autores: Marti Duocastella
Publicado en: Imaging Across Scales- From Molecules to Humans, Southampton, UK, 2024
Editor: University of Southampton

AI for Biological problems: Challenges, Solutions, and Lessons from Microscopy and Life-Science Applications

Autores: Dilip K. Prasad
Publicado en: Bioscopy Conference, 2026
Editor: UiT

Label-free chemical imaging with computerised super-resolution method to explore demyelination in Alzheimer’s Disease

Autores: Dipanjan Bhattacharya
Publicado en: ARUK Annual meeting 2025, 2025
Editor: ARUK

Shaping light with sound for fast and deep 3D imaging

Autores: Marti Duocastella
Publicado en: SPIE Defense + Security, Washington DC, USA, 2026
Editor: SPIE

Guided U-Net aided Efficient Image Data Storing with Shape Preservation

Autores: N. Banerjee, S. Malakar, D. K. Gupta, A. Horsch, D.K. Prasad
Publicado en: 2023
Editor: Asian Conference on Pattern Recognition (ACPR2023)

Shape-based Forward Modeling via SIEs for Label-free Microscopy

Autores: Y. Huang, Y. Qin and K. Agarwal
Publicado en: Photonics & Electromagnetics Research Symposium, 2025
Editor: PIERS

Project presentation

Autores: Matteo Bregonzio
Publicado en: 2022
Editor: GO BEYOND 2022

Reconstructing 3D shape from 3D ThunderSTORM Point Clouds

Autores: S. Jadhav, S. Majhi, A.S. Chowdhury, D.K. Prasad, K. Agarwal
Publicado en: 2023
Editor: Focus on Microscopy

Development of a label-free computational resolution enhancement method towards biomedical applications

Autores: D. Bhattacharya
Publicado en: Bioscopy Conference, 2026
Editor: UiT

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autores: Florian Weinberger
Publicado en: McEwen Stem Cell Insitute, Seminar Series, 2025
Editor: McEwen Stem Cell Institute

Quantitative phase imaging of fast dynamic events using acousto-optics and pulsed illumination

Autores: Christos Alexandropoulos, Martí Duocastella
Publicado en: 2023
Editor: Focus on Microscopy

Stem Cell-Derived Engineered Heart Tissue Develops in the Absence of Contractility

Autores: C. Manthey, T. Stüdemann, A. Shibamiya, M. Köhne, G. Penalosa Ruiz, J. Rössinger, R. Srikantharajah, C. Schulz, T. Christ, T. Eschenhagen, F. Weinberger
Publicado en: Annual Meeting of the German Cardiac Society, 2023
Editor: Clinical Research in Cardiology

No Imputation Needed: A Switch Approach to Irregularly Sampled Time Series

Autores: Rohit Agarwal, Aman Sinha, Ayan Vishwakarma, Xavier Coubez, Marianne Clausel, Mathieu Constant, Alexander Horsch, Dilip K. Prasad
Publicado en: NeurIPS 2025 Workshop, 2025
Editor: NeurIPS 2025 Workshop

Multimodal Femtosecond Fiber Laser Microscopy of Engineered Heart Tissues with Acousto-Optic Deflectors

Autores: K König, M Duocastella, M Skorsetz, D Pankin, G Rieger, F Weinberger, N Shehata, A König
Publicado en: Focus on Microscopy 2025, 2025
Editor: Focus on Microscopy

Toward Clinical 3D Pathology: Opportunities and Technological Challenges in Light Microscopy

Autores: F. Niknam, Y. Anbarestani
Publicado en: Bioscopy Conference, 2026
Editor: UiT The Arctic University of Norway

Intercellular transfer of cardiac mitochondria evaluated by high-sensitivity 3D imaging cytometry, high-resolution microscopy and high-throughput cell respirometry

Autores: Kenneth B. Larsen, Mauro Calvoli, Mireia Nager, Trine B. Kalstad and Asa B. Birgisdottir
Publicado en: Cell Press Symposium: Multifaceted Mitochondria, 2026
Editor: Cell Press

Cardiac Work Inhibits Cell Cycle Activity in Engineered Heart Tissue

Autores: R. Srikantharajah, N. Shehata, T. Stüdemann, C. Manthey, T. Eschenhagen, F. Weinberger
Publicado en: The Thoracic and Cardiovascular Surgeon, 56th Annual Meeting of the German Society for Pediatric Cardiology (DGPK), 2024
Editor: Georg Thieme Verlag KG
DOI: 10.1055/s-0044-1780731

Modified Richardson-Lucy Algorithm enables High-Fidelity and Fast Deconvolution

Autores: F. Niknam, K. Agarwal
Publicado en: BioPhysics Symposium, 2024
Editor: UiT The Arctic University of Norway

High-Fidelity Volumetric Tissue Microscopy: Integrating Computational Adaptive Optics with Accelerated Deconvolution

Autores: F. Niknam, K. Agarwal
Publicado en: Bioscopy Conference, 2026
Editor: UiT The Arctic University of Norway

Pluripotent stem cell-based heart repair

Autores: Florian Weinberger
Publicado en: Queen Mary University, London Cardiovascular Seminar Series, 2024
Editor: Queen Mary University

Toward Reliable CIE Inversion for Optical Microscopy: A Framework for Hyper-parameter Selection and Efficient Reconstruction

Autores: Y. Huang, Y. Qin, Y. Zhong and K. Agarwal
Publicado en: Photonics & Electromagnetics Research Symposium (PIERS 2025), 2025
Editor: PIERS

Hedging Is Not All You Need: A Simple Baseline for Online Learning Under Haphazard Inputs

Autores: Himanshu Buckchash, Momojit Biswas, Rohit Agarwal, Dilip K. Prasad
Publicado en: ICASSP 2025 - 2025 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2026, Página(s) 1-5
Editor: IEEE
DOI: 10.1109/icassp49660.2025.10889697

Gradient Light Interference Microscopy for labelfree detection of early changes in kidney cells embedded in a soft and stiff hydrogel matrix

Autores: B. Ghosh, K. A. Fenton, K. Agarwal
Publicado en: 2023
Editor: Focus on Microscopy

Label-free multimodal femtosecond fiber laser microscopy of organoids with acousto-optic deflectors

Autores: Karsten König, Aisada König, Dmitry Pankin, Martin Skorsetz, Florian Weinberger, Nancy Shehata, Krishna Agarwal, Martí Duocastella
Publicado en: Multiphoton Microscopy in the Biomedical Sciences XXV, 2025, Página(s) 42
Editor: SPIE
DOI: 10.1117/12.3039099

A Privacy-Preserving Approach to Data and Artificial Intelligence

Autores: Matteo Bregonzio
Publicado en: Bioscopy Conference, 2026
Editor: UiT

Creating In Vitro Kidney Glomerular Microenvironment In 3d Hydrogels For Studying Chronic Kidney Diseases

Autores: Ghosh, B., K Fenton, K Agarwal
Publicado en: Tissue Engineering Part A, 2024
Editor: Sage Journals

Analysing the interaction between cardiomyocyte work and cell-cycle with human stem cell derived engineered heart tissue

Autores: Nancy Shehata
Publicado en: Gordon Research Conference - Cardiac Regulatory Mechanism, 2024
Editor: Gordon Research Conference - Cardiac Regulatory Mechanism

A Blind Deconvolution Approach for Wide-Field Microscopy

Autores: Farhad Niknam, Krishna Agarwal
Publicado en: Optica Imaging Congress 2024 (3D, AOMS, COSI, ISA, pcAOP), 2024, Página(s) JF2A.6
Editor: Optica Publishing Group
DOI: 10.1364/3d.2024.jf2a.6

Stem-cell based heart repair – pharmacological perspective

Autores: Florian Weinberger
Publicado en: 2022, Página(s) The submissions were abstract only and are open access.
Editor: ISHR World Congress

Towards a Physics-Informed Deep Learning Approach for 3D Phaseless Microscopy

Autores: Nicola Cuzzocrea, Nadia Mammone, Cosimo Ieracitano, Yingying Qin, Krishna Agarwal, Martina T. Bevacqua
Publicado en: 2026 IEEE MTT-S International Microwave Biomedical Conference (IMBioC), 2026, Página(s) 1-3
Editor: IEEE
DOI: 10.1109/imbioc69142.2026.11541160

Computational modeling of light transport for mesoscopic optical microscopy

Autores: Y. Qin, Y. Zhong and K. Agarwal
Publicado en: Bioscopy conference, 2026
Editor: UiT The Arctic University of Norway

Controlling light with sound for enhanced materials processing

Autores: Martí Duocastella
Publicado en: Laser Applications in Microelectronic and Optoelectronic Manufacturing (LAMOM) XXIX, Edición Abstract is open access, 2024, Página(s) 27
Editor: SPIE
DOI: 10.1117/12.3001039

What is Good Enough Myocardial Repair, Recovery or Remission in Chronic HF? Basic Science Perspective

Autores: Florian Weinberger
Publicado en: 2022
Editor: U-Cars Symposium 2022

Finding an Appropriate Dose for Engineered Heart Tissue

Autores: Florian Weinberger
Publicado en: 2022
Editor: Cardiovascular Bioengineering Symposium

Kilohertz frequency encoded microscopy using acousto-optic deflectors

Autores: Andrea Marchese, Pietro Ricci, Peter Saggau, Martí Duocastella
Publicado en: 2023
Editor: Focus on Microscopy

Cardiac tissue engineering – opportunities for cardiac regeneration

Autores: Florian Weinberger
Publicado en: CNIC Regeneration Symposium, 2022
Editor: CNIC

Analysing the interaction between cardiomyocyte work and cell-cyclehuman stem cell derived engineered heart tissue

Autores: Nancy Shehata
Publicado en: Cardiovascular Bioengineering Symposium, XXV ISHR World Congress, 2025
Editor: ISHR

Generation of human engineered heart tissue with a chemo- and optogenetic Off-On switch

Autores: Judith Rössinger, Tim Stüdemann, Aya Shibamiya, Torsten Christ, Thomas Eschenhagen, Florian Weinberger
Publicado en: 2022, Página(s) The submissions were abstract only and are open access.
Editor: ISHR World Congress

A different perspective on illumination choice for label-free scattering microscopy

Autores: Y. Qin, Y. Zhong, and K. Agarwal
Publicado en: Focus on Microscopy 2026, 2026
Editor: Focus on Microscopy

Marked increase in mitochondria degradation in engineered heart tissue during reperfusion

Autores: Mireia Nager Grifo
Publicado en: Experimental Health Research Conference, 2023
Editor: UiT The Arctic University of Norway

Chemogenetics to study the interplay between cardiac contractility and cardiomyocyte morphology

Autores: Judith Rössinger
Publicado en: Keystone Conference, 2023
Editor: Keystone Conference

"“Focus on engineered heart tissue transplantation: The HeartVision project”, invited talk at NORHEART seminar: ""Mechanisms in Cardiac Metabolism and Mitochondrial function: Highlighting Translational Aspects"", UiT, 2026"

Autores: A. B. Birgisdottir
Publicado en: 2026, Página(s) No abstracts were published. The seminar was open to all and streamed. Link to the program provided.
Editor: UiT-The Arctic University of Norway

Predicting Early Diabetic Kidney Disease Using a 3D Mesangial Model and Bayesian Mechano-Chemical Stratification

Autores: Biswajoy Ghosh, Farhad Niknam, Nikhil Kumar, Kristin Andreassen Fenton, Krishna Agarwal
Publicado en: 2026
Editor: openRxiv
DOI: 10.1101/2023.12.10.571017

Codeset: Modelling Irregularly Sampled Time Series Without Imputation

Autores: Rohit Agarwal
Publicado en: 2023
Editor: Github

MiShape: 3D Shape Modelling of Mitochondria in Microscopy

Autores: Abhinanda R. Punnakkal, Suyog S Jadhav, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Publicado en: 2023
Editor: Arxiv

Replication Data for: Multiple signal classification as a blind reconstruction approach for three-dimensional structured illumination microscopy

Autores: Ida S. Opstad
Publicado en: 2023
Editor: DataverseNO

LysoTracker Deep Red exhibits photoconversion in multi-color structured illumination microscopy

Autores: Ida Sundvor Opstad, Kenneth Bowitz Larsen, Åsa Birna Birgisdottir, Krishna Agarwal
Publicado en: 2023
Editor: BiorXiv
DOI: 10.1101/2023.10.29.564502

Fluorescence microscopy videos of mitochondria in H9c2 cardiomyoblasts

Autores: Ida S. Opstad
Publicado en: 2023
Editor: DataverseNO

Contractility governs cardiomyocyte cell cycle activity

Autores: Nancy Shehata, Rajiven Srikantharajah, Eleonore Baier, Christoph Manthey, Tim Stüdemann, Marie Nehring, Anita Covic, Christian Müller, Bente Siebels, Paula Nissen, Anika Witten, Magdalena Zafra Castellano, Yago Rodriguez, Lucia Zamacona Gomez, Imke Janssen, Jorge Rodriguez, Andrea Garza Enriquez, Miguel Angel Garitagoitia Romero, Romina Di Mattia, Andreas Dendorfer, Alessandra Moretti, Christine
Publicado en: 2026
Editor: openRxiv
DOI: 10.1101/2025.08.19.671096

Dataset and codeset for BMWP: the first Bengali math word problems dataset for operation prediction and solving

Autores: Sanchita Mondal
Publicado en: Dataset, 2025
Editor: Github

Aux-Drop: Handling Haphazard Inputs in Online Learning Using Auxiliary Dropouts

Autores: R. Agarwal
Publicado en: Codeset, 2023
Editor: Github

Online Learning under Haphazard Input Conditions: A Comprehensive Review and Analysis

Autores: R. Agarwal
Publicado en: Dataset, 2026
Editor: Github

Online Learning under Haphazard Input Conditions: A Comprehensive Review and Analysis

Autores: Rohit Agarwal; Arijit Das; Alexander Horsch; Krishna Agarwal; Dilip K. Prasad
Publicado en: CoRR, Edición 2, 2024
Editor: Arxiv
DOI: 10.48550/arxiv.2404.04903

"""OrganVision: An ERC funded interdisciplinary collaboration project” invited talk at IMB conference"

Autores: A. B. Birgisdottir
Publicado en: 2022, Página(s) The entire event was open for all. The program was broadcast on digital stream of university. temporary link to program is given.
Editor: IMB conference

Multifocus microscopy with optically sectioned axial superresolution

Autores: Ströhl, Florian; Hansen, Daniel Henry; Nager Grifo, Mireia; Birgisdottir, Åsa Birna
Publicado en: Edición 1, 2022
Editor: Arxiv
DOI: 10.48550/arxiv.2206.01257

Activity Report 2021

Autores: Institut de Nanociència i Nanotecnologia
Publicado en: instname:, Edición 1, 2021
Editor: University of Barcelona

"""Monitoring mitochondria degradation in cardiac cells"" invited talk at the NORHEART seminar ""Targeting mitochondria in cardiovascular disease"""

Autores: A. B. Birgisdottir
Publicado en: 2021
Editor: NORHEART seminar

Tool & Video Protocol: Tool on fluorescence microscopy images of fixed cardiomyoblasts

Autores: Abhinanda Punakkal et al.
Publicado en: 2023
Editor: JOVE

Phase 1 digital staining AI model codesets using Co-Fl-Lf datasets from conventional microscopes

Autores: Lorenzo Venieri
Publicado en: Dataset, 2024
Editor: Github

«Mitophagy is induced in engineered heart tissue after simulated ischemia and reperfusion», invited talk at NORHEART seminar « Pathways and Regulatory Mechanisms in Metabolism and Mitochondrial Function», UiT-The Arctic University of Norway, Tromsø, Norway, May 12-13, 2025

Autores: M. Nager
Publicado en: 2025, Página(s) No abstracts were published. Seminar open to all NORHEART members and was streamed. Link to program provided.
Editor: UiT-The Arctic University of Norway

“Monitoring degradation of mitochondria in cardiac cells”, invited talk at Annual meeting of the Scandinavian Physiological Society

Autores: A. B. Birgisdottir
Publicado en: 2021, Página(s) No abstracts or papers were submitted. Program is open access.
Editor: Scandinavian Physiological Society

Wasserstein GAN for three-dimensional multi-channel virtual fluorescent staining

Autores: Andrea Masella
Publicado en: Codeset, 2024
Editor: Github

"«Interdisciplinary collaboration synergy» , invited talk at a ""Research leader seminar"", Faculty of Health Sciences, UiT, 2026"

Autores: A. B. Birgisdottir
Publicado en: 2026, Página(s) No abstracts were published from the seminar. Seminar open to all invited research leaders at the Faculty. Link to the program is provided.
Editor: UiT-The Arctic University of Norway

Latent Graph Attention for Enhanced Spatial Context

Autores: Ayush Singh, Yash Bhambhu, Himanshu Buckchash, Deepak K. Gupta, Dilip K. Prasad
Publicado en: Arxiv, 2023
Editor: Arxiv
DOI: 10.48550/arxiv.2307.04149

Codeset: Presenting CODS (Cell Organelle Dynamic Simulation)

Autores: A. V. Celeste
Publicado en: Codeset, 2023
Editor: UiT The Arctic University of Norway

Codeset and dataset for: Graph-based hostile content detection in Hindi language. Discover Computing.

Autores: Chakraborty, A., Joardar, S., Prasad, D. K., & Sekh, A. A.
Publicado en: Dataset, 2025
Editor: Github

Fluorescence microscopy videos of mitochondria and endosomes in H9c2 cardiomyoblasts

Autores: Ida S. Opstad
Publicado en: 2023
Editor: DataverseNO

«Monitoring mitochondria turnover and transfer in cardiac cells», invited talk at the Bioscopy conference, UiT, Tromsø, Norway, 2026

Autores: A. B. Birgisdottir
Publicado en: 2026, Página(s) No abstracts were published. Link to the program is provided.
Editor: UiT-The Arctic University of Norway

pNNCLR: Stochastic Pseudo Neighborhoods for Contrastive Learning based Unsupervised Representation Learning Problems

Autores: Momojit Biswas, Himanshu Buckchash, Dilip K. Prasad
Publicado en: 2023
Editor: Arxiv
DOI: 10.48550/arxiv.2308.06983

Towards a More Inclusive AI: Progress and Perspectives in Large Language Model Training for the S\'ami Language

Autores: Paul, Ronny; Buckchash, Himanshu; Parida, Shantipriya; Prasad, Dilip K.
Publicado en: Edición 1, 2024
Editor: Arxiv

"""HeartVision-a success story"", invited speaker at the IMB conference 2025, Faculty of Health Sciences UiT, 2025"

Autores: A. B. Birgisdottir
Publicado en: 2025, Página(s) No abstracts were published. Conference open to all employees at IMB, UiT. Link to the program provided.
Editor: UiT-The Arctic University of Norway

"""Exploiting cardiomyocytes derived from human induced pluripotent stem cells and engineered heart tissue for studying cellular mechanism in the human heart"", invited talk at the Experimental Health Research Conference (EHRC), Faculty of Health Sciences, UiT, 2025"

Autores: A. B. Birgisdottir
Publicado en: 2025, Página(s) No abstracts were published from the conference. Link to the conference program is provided.
Editor: UiT-The Arctic University of Tromsø

Summer School Course Tutorial Codeset “Interpretable DL Playground”

Autores: Ayush Somani
Publicado en: 2023
Editor: Github

"""Marked increase in mitochondria degradation in engineered heart tissue during reperfusion"""

Autores: A. B. Birgisdottir and M.N. Grifo
Publicado en: 2023
Editor: Mimisbrunnr conference

"""Mitophagy is induced in engineered heart tissue after simulated ischemia and reperfusion"", invited talk to present the published paper´s main findings at a webinar organized by MITOtalks and Focal plane, 2025."

Autores: M. Nager and A. B. Birgisdottir
Publicado en: 2025, Página(s) No abstracts published. Webinar open to all that registrered. Link to webinar announcement provided.
Editor: MITOtalks and Focal Plane

3DMSL - 3D Mitochondria Shape Library for Optical Microscopy

Autores: Punnakkal, Abhinanda Ranjit; Jadhav, Suyog S; Celeste, Aaron Vaughn; Horsch, Alexander; Agarwal, Krishna; Prasad, Dilip K
Publicado en: Dataset, 2024
Editor: DataverseNO
DOI: 10.18710/jx6jxf

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autores: R. Agarwal
Publicado en: 2023
Editor: Github

""" Insights into Cardiac Repair Mechanisms from Engineered Heart Tissue"". Keynote talk at NOR-MPS-the annual NOR-MPS; Nordic Organoid and Microphysiological Systems Convention, University of Oslo, Oslo, Norway, 2026"

Autores: Florian Weinberger
Publicado en: 2026, Página(s) No abstracts were published. Link to the program is attached.
Editor: University of Oslo

Label-free acoustic and optical microscopy of live tumor spheroids in hydrogel for high-throughput 3D In-vitro drug screening

Autores: Biswajoy Ghosh, Komal Agarwal, Anowarul Habib, Krishna Agarwal, Frank Melandsø
Publicado en: 2026
Editor: openRxiv
DOI: 10.1101/2024.08.28.610181

Finding an Appropriate Dose for Engineered Heart Tissue

Autores: Florian Weinberger
Publicado en: Translational Research Seminar Series, SickKids Hospital, Toronto, Canada, Edición No abstract submitted, 2021
Editor: SickKids Hospital

"""Exploiting engineered heart tissue to decipher mitochondria quality control in the human heart"", invited talk at NOR-MPS, the annual Nordic Organoid and Microphysiological Systems Convention Oslo, Norway, 2026"

Autores: A. B. Birgisdottir
Publicado en: 2025, Página(s) No abstracts published from the symposium. Link to the program provided.
Editor: University of Oslo

Modelling Irregularly Sampled Time Series Without Imputation

Autores: Rohit Agarwal, Aman Sinha, Dilip K. Prasad, Marianne Clausel, Alexander Horsch, Mathieu Constant, Xavier Coubez
Publicado en: 2023
Editor: Arxiv
DOI: 10.48550/arxiv.2309.08698

Paper Code: Virtual Labeling of Mitochondria in Living Cells using Physics-guided Deep Learning

Autores: Ayush Somani
Publicado en: 2022
Editor: Github

Arctic LLM Workshop Hands-on Tutorial Session

Autores: Ayush Somani
Publicado en: 2023
Editor: Github

Dense Video Captioning: A Survey of Techniques, Datasets and Evaluation Protocols

Autores: Qasim, Iqra; Horsch, Alexander; Prasad, Dilip K.
Publicado en: Edición 1, 2023
Editor: Arxiv
DOI: 10.48550/arxiv.2311.02538

Evidence for the inhibition of cardiomyocytes cycle activity by cardiac contraction

Autores: Nancy Sorial Samy Shehata
Publicado en: 2026
Editor: University of Hamburg

Reconstructing 3D Geometries of sub-cellular structures from SMLM clouds

Autores: S. Jadhav
Publicado en: 2023
Editor: UiT The Arctic University of Norway

Multiple Signal Classification Algorithm: A computational microscopy tool for fluorescence microscopy

Autores: Sebastián Andrés Acuña Maldonado
Publicado en: 2023
Editor: MUNIN, UiT

Study of mitochondrial degradation induced by cryoinjury in engineered heart tissue

Autores: Synne Amalie Hansen
Publicado en: 2024
Editor: UiT-The Arctic University of Norway

Scalable Online Deep Learning for Streaming Data with Variable Feature Spaces: Architectures, Imparting Scalability and Data Transformation

Autores: Rohit Agarwal
Publicado en: 2025
Editor: UiT The Arctic University of Norway

Presenting CODS (Cell Organelle Dynamic Simulation)

Autores: Aaron Celeste
Publicado en: 2023
Editor: UiT The Arctic University of Norway

Advanced Microscopy for Real-time Imaging of Biological Samples

Autores: Christos Alexandropoulos
Publicado en: 2026
Editor: Universitat de Barcelona

Generative Adversarial Networks For Three-Dimensional Multi-Channel Virtual Fluorescent Staining

Autores: Lorenzo Venieri
Publicado en: 2024
Editor: Università di Bologna
DOI: 10.5281/zenodo.13382862

Study of mitochondrial transfer in hiPSC derived cardiomyocytes and engineered heart tissue

Autores: Kristiana Imsa
Publicado en: 2023
Editor: UiT The Arctic University of Norway

Encoded illumination for high-speed optical microscopy

Autores: Eva Maria Torres-Riera
Publicado en: 2023
Editor: Universitat Politecnica de Catalunya

Scattering-enhanced intensity based tomography

Autores: Yingying Qin, Ankit Butola, Yu Zhong, Krishna Agarwal
Publicado en: IEEE Transactions on Computational Imaging, 2026, Página(s) 1-9, ISSN 2333-9403
Editor: Institute of Electrical and Electronics Engineers (IEEE)
DOI: 10.1109/tci.2026.3707064

IReCAPTCHA: a robust image-reasoning CAPTCHA system

Autores: Bidyut Das, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: Cybersecurity, Edición 9, 2026, ISSN 2523-3246
Editor: Springer Science and Business Media LLC
DOI: 10.1186/s42400-025-00484-0

Fluorescence microscopy and correlative brightfield videos of mitochondria and vesicles in H9c2 cardiomyoblasts

Autores: Ida S. Opstad, Åsa B. Birgisdottir, Krishna Agarwal
Publicado en: Scientific Data, Edición vol. 11, 2024, Página(s) Article 125, ISSN 2052-4463
Editor: Springer Nature
DOI: 10.1038/s41597-024-02970-5

Latent Graph Attention for Spatial Context in Light-Weight Networks: Multi-Domain Applications in Visual Perception Tasks

Autores: Ayush Singh, Yash Bhambhu, Himanshu Buckchash, Deepak K. Gupta, Dilip K. Prasad
Publicado en: Applied Sciences, Edición 14, 2025, Página(s) 10677, ISSN 2076-3417
Editor: MDPI AG
DOI: 10.3390/app142210677

Graph-based hostile content detection in Hindi language

Autores: Angana Chakraborty, Subhankar Joardar, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: Discover Computing, Edición 28, 2025, ISSN 2948-2992
Editor: Springer Science and Business Media LLC
DOI: 10.1007/s10791-025-09790-0

Modulating cardiac physiology in engineered heart tissue with the bidirectional optogenetic tool BiPOLES

Autores: Barbora Schwarzová, Tim Stüdemann, Muhammed Sönmez, Judith Rössinger, Bangfen Pan, Thomas Eschenhagen, Justus Stenzig, J Simon Wiegert, Torsten Christ, Florian Weinberger
Publicado en: Pflugers Archive, European Journal of Physiology, 2023, ISSN 0031-6768
Editor: Springer Verlag
DOI: 10.1007/s00424-023-02869-x

Scan-less microscopy based on acousto-optic encoded illumination

Autores: Andrea Marchese , Pietro Ricci , Peter Saggau, Martí Duocastella
Publicado en: Nanophotonics, Edición Volume 13, Edición 1, 2024, Página(s) 63-73, ISSN 2192-8614
Editor: Berlin de Gruyter
DOI: 10.1515/nanoph-2023-0616

An UltraMNIST classification benchmark to train CNNs for very large images

Autores: Deepak K. Gupta, Udbhav Bamba, Abhishek Thakur, Akash Gupta, Rohit Agarwal, Suraj Sharan, Ertugul Demir, Krishna Agarwal, Dilip K. Prasad
Publicado en: Scientific Data, Edición 11, 2024, ISSN 2052-4463
Editor: Springer Science and Business Media LLC
DOI: 10.1038/s41597-024-03587-4

Mitophagy is induced in human engineered heart tissue after simulated ischemia and reperfusion

Autores: Mireia Nàger, Kenneth B. Larsen, Zambarlal Bhujabal, Trine B. Kalstad, Judith Rössinger, Truls Myrmel, Florian Weinberger, Asa B. Birgisdottir
Publicado en: Journal of Cell Science, Edición 138, 2025, ISSN 0021-9533
Editor: The Company of Biologists Ltd.
DOI: 10.1242/jcs.263408

TERMIS 2023 – European Chapter Manchester Central Conference Centre Manchester, UK March 28–31, 2023

Autores: Biswajoy Ghosh, Krishna Agarwal
Publicado en: Tissue Engineering Part A, 2023, ISSN 1937-3341
Editor: Mary Ann Liebert Inc.
DOI: 10.1089/ten.tea.2023.29043.abstracts

Multilingual visual question answering for visually impaired people

Autores: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: Discover Artificial Intelligence, Edición 5, 2025, ISSN 2731-0809
Editor: Springer Science and Business Media LLC
DOI: 10.1007/s44163-025-00482-8

Propagating Transparency: A Deep Dive into the Interpretability of Neural Networks

Autores: Ayush Somani, Alexander Horsch, Ajit Bopardikar, Dilip K. Prasad
Publicado en: Nordic Machine Intelligence, Edición 4, 2024, Página(s) 1-18, ISSN 2703-9196
Editor: University of Oslo Library
DOI: 10.5617/nmi.10755

Mitochondrial dynamics and quantification of mitochondria‐derived vesicles in cardiomyoblasts using structured illumination microscopy

Autores: Ida S. Opstad, Gustav Godtliebsen, Balpreet Singh Ahluwalia, Truls Myrmel, Krishna Agarwal, Åsa Birna Birgisdottir
Publicado en: Journal of Biophotonics, Edición 15, 2023, ISSN 1864-063X
Editor: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/jbio.202100305

Multifocus microscopy with optical sectioning and high axial resolution

Autores: Florian Ströhl, Daniel Henry Hansen, Mireia Nager Grifo, Åsa Birna Birgisdottir
Publicado en: Optica, Edición Vol. 9, Edición 11, 2022, Página(s) 1210-1218, ISSN 2334-2536
Editor: Optica Publishing Group
DOI: 10.1364/optica.468583

BMWP: the first Bengali math word problems dataset for operation prediction and solving

Autores: Sanchita Mondal, Debnarayan Khatua, Sourav Mandal, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: Discover Artificial Intelligence, Edición 5, 2025, ISSN 2731-0809
Editor: Springer Science and Business Media LLC
DOI: 10.1007/s44163-025-00243-7

Improving visual question answering for visually impaired people leveraging pre-trained models

Autores: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: Discover Applied Sciences, Edición 8, 2026, ISSN 3004-9261
Editor: Springer Science and Business Media LLC
DOI: 10.1007/s42452-025-07996-x

The multifaceted role of autophagy and mitophagy in cardiovascular health and disease

Autores: Mireia Nàger, Mauro Calvoli, Kenneth B. Larsen, Asa B. Birgisdottir
Publicado en: Autophagy Reports, Edición 4, 2025, ISSN 2769-4127
Editor: Informa UK Limited
DOI: 10.1080/27694127.2025.2572511

3D Mitochondria Shape Library for Optical Microscopy (3DMSL): A multimodal dataset for deep learning based mitochondrial analysis

Autores: Abhinanda R. Punnakkal, Suyog S. Jadhav, Aaron V. Celeste, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Publicado en: Data in Brief, Edición 65, 2026, Página(s) 112507, ISSN 2352-3409
Editor: Elsevier BV
DOI: 10.1016/j.dib.2026.112507

Author Correction: Viewing life without labels under optical microscopes

Autores: Biswajoy Ghosh, Krishna Agarwal
Publicado en: Communications Biology, Edición 7, 2024, ISSN 2399-3642
Editor: Springer Science and Business Media LLC
DOI: 10.1038/s42003-024-06977-x

AI-driven analysis by identifying risk factors of VL relapse in HIV co-infected patients

Autores: Abhishek Kumar, Sanchita Mondal, Debnarayan Khatua, Debashree Guha, Budhaditya Mukherjee, Arista Lahiri, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: Scientific Reports, Edición 15, 2025, ISSN 2045-2322
Editor: Nature Publishing Group
DOI: 10.1038/s41598-025-07406-7

HnRNP K mislocalisation is a novel protein pathology of frontotemporal lobar degeneration and ageing and leads to cryptic splicing

Autores: Alexander Bampton, Ariana Gatt, Jack Humphrey, Sara Cappelli, Dipanjan Bhattacharya, Sandrine Foti, Anna-Leigh Brown, Yasmine Asi, Yi Hua Low, Marco Foiani, Towfique Raj, Emanuele Buratti, Pietro Fratta, Tammaryn Lashley
Publicado en: Acta Neuropathologica, Edición 142, 2021, Página(s) 609-627, ISSN 0001-6322
Editor: Springer Verlag
DOI: 10.1007/s00401-021-02340-0

3D refractive index reconstruction from phaseless coherent optical microscopy data using multiple scattering-based inverse solvers - a study

Autores: Yingying Qin, Ankit Butola, Krishna Agarwal
Publicado en: Inverse Problems, Edición volume 40, no. 1, 2023, Página(s) article 015003, ISSN 0266-5611
Editor: Institute of Physics Publishing
DOI: 10.1088/1361-6420/ad0c29

Multiphoton Imaging With Frequency Encoded Illumination Using Dual Acousto-Optic Deflectors

Autores: M. Skorsetz, A. König, G. Rieger, K. König
Publicado en: IEEE Photonics Journal, Edición 18, 2026, Página(s) 1-6, ISSN 1943-0655
Editor: Institute of Electrical and Electronics Engineers
DOI: 10.1109/jphot.2026.3660905

Abstract 14720: Marked Increase in Mitochondria Degradation in Engineered Heart Tissue During Reperfusion

Autores: Mireia Nager, Zambarlal Bhujabal, Kenneth B Bowitz Larsen, Trine B Kalstad, Truls Myrmel, Asa B Birgisdottir
Publicado en: Circulation, Edición 146, 2023, ISSN 0009-7322
Editor: Lippincott Williams & Wilkins Ltd.
DOI: 10.1161/circ.146.suppl_1.14720

High-speed fluctuation microscopy with acousto-optic illumination

Autores: F Niknam, L Rodríguez-Suné, K Agarwal, M Duocastella
Publicado en: Journal of Physics: Photonics, Edición 8, 2026, Página(s) 025004, ISSN 2515-7647
Editor: IOP Publishing
DOI: 10.1088/2515-7647/ae54eb

Modulation of cardiomyocyte contractility and action potentials with chemogenetic chloride currents

Autores: Muhammed Sönmez, Tim Stüdemann, Christoph Manthey, Anita Covic, Nancy Shehata, Junsoo Im, Barbora Schwarzova, Judith Rössinger, Rajiven Srikantharajah, Aya Shibamiya, Edzard Schwedhelm, Thomas Eschenhagen, Torsten Christ, Florian Weinberger
Publicado en: The Journal of Physiology, Edición 603, 2025, Página(s) 1399-1415, ISSN 0022-3751
Editor: Blackwell Publishing Inc.
DOI: 10.1113/jp286428

Chemogenetic engineered heart tissue to study the influence of contractility on cardiac maturation

Autores: Rajiven Srikantharajah, Tim Stüdemann, Nancy Shehata, Christoph Manthey, Thomas Eschenhagen, Florian Weinberger
Publicado en: Journal of Molecular and Cellular Cardiology Plus, Edición 15, 2026, Página(s) 100719, ISSN 2772-9761
Editor: Elsevier BV
DOI: 10.1016/j.jmccpl.2025.100719

VisionAidQA: Advancing Visual Question Answering for the Visually Impaired

Autores: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: ACM Computing Surveys, Edición 58, 2026, Página(s) 1-36, ISSN 0360-0300
Editor: Association for Computing Machinary, Inc.
DOI: 10.1145/3788861

Impulse initiation in engrafted pluripotent stem cell-derived cardiomyocytes can stimulate the recipient heart

Autores: Tim Stüdemann, Barbora Schwarzova, Till Schneidewind, Birgit Geertz, Constantin von Bibra, Marie Nehring, Judith Rössinger, J. Simon Wiegert, Thomas Eschenhagen, Florian Weinberger
Publicado en: Stem Cell Reports, 2026, ISSN 2213-6711
Editor: Cell Press
DOI: 10.1101/2023.11.12.566756

Snapshot Quantitative Phase Imaging with Acousto-Optic Chromatic Aberration Control

Autores: Christos Alexandropoulos, Laura Rodríguez-Suñé, Martí Duocastella
Publicado en: Sensors, Edición 25, 2025, Página(s) 4503, ISSN 1424-8220
Editor: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/s25144503

Viewing life without labels under optical microscopes

Autores: Biswajoy Ghosh, Krishna Agarwal
Publicado en: Communication Biology, Edición vol. 6, 2023, Página(s) article number 559, ISSN 2399-3642
Editor: Springer Nature
DOI: 10.1038/s42003-023-04934-8

BGPCN: A BERT and GPT-2-based Relational Graph Convolutional Network for hostile Hindi information detection

Autores: Angana Chakraborty, Subhankar Joardar, Dilip K. Prasad, Arif Ahmed Sekh
Publicado en: Array, Edición 28, 2026, Página(s) 100601, ISSN 2590-0056
Editor: Elsevier BV
DOI: 10.1016/j.array.2025.100601

Challenges and perspectives of heart repair with pluripotent stem cell-derived cardiomyocytes

Autores: Thomas Eschenhagen, Florian Weinberger
Publicado en: Nature Cardiovascular Research, Edición 3, 2024, Página(s) 515-524, ISSN 2731-0590
Editor: Springer Science and Business Media LLC
DOI: 10.1038/s44161-024-00472-6

Analyzing Mitochondrial Morphology Through Simulation Supervised Learning

Autores: Abhinanda Ranjit Punnakkal, Gustav Godtliebsen, Ayush Somani, Sebastian Andres Acuna Maldonado, Åsa Birna Birgisdottir, Dilip K. Prasad, Alexander Horsch, Krishna Agarwal
Publicado en: Journal of Visualized Experiments, 2024, ISSN 1940-087X
Editor: MYJoVE Corporation
DOI: 10.3791/64880-v

Molecular histopathology of matrix proteins through autofluorescence super-resolution microscopy

Autores: Biswajoy Ghosh, Jyotirmoy Chatterjee, Ranjan Rashmi Paul, Sebastian Acuña, Pooja Lahiri, Mousumi Pal, Pabitra Mitra, Krishna Agarwal
Publicado en: Scientific Reports, Edición 14, 2024, ISSN 2045-2322
Editor: Nature Publishing Group
DOI: 10.1038/s41598-024-61178-0

Label-free correlative morpho-chemical tomography of 3D kidney mesangial cells

Autores: Ankit Butola, Biswajoy Ghosh, Jaena Park, Minsung Kwon, Alejandro De la Cadena, Sudipta S Mukherjee, Rohit Bhargava, Stephen A. Boppart, Krishna Agarwal
Publicado en: Journal of Biomedical Optics, Edición 31, 2026, ISSN 1083-3668
Editor: S P I E - International Society for Optical Engineering
DOI: 10.1117/1.jbo.31.3.036501

High-resolution visualization and assessment of basal and OXPHOS-induced mitophagy in H9c2 cardiomyoblasts

Autores: Gustav Godtliebsen, Kenneth Bowitz Larsen, Zambarlal Bhujabal, Ida S Opstad, Mireia Nager, Abhinanda R Punnakkal, Trine B Kalstad, Randi Olsen, Trine Lund, Dilip K Prasad, Krishna Agarwal, Truls Myrmel, Asa Birna Birgisdottir
Publicado en: Autophagy, Edición vol. 19, issue 10, 2023, Página(s) 2769-2788, ISSN 1554-8627
Editor: Landes Bioscience
DOI: 10.1080/15548627.2023.2230837

Video-rate quantitative phase imaging with dynamic acousto-optic defocusing

Autores: Christos Alexandropoulos, Martí Duocastella
Publicado en: Optics and Lasers in Engineering, Edición Volume 169, October 2023, 2023, Página(s) article 107692, ISSN 0143-8166
Editor: Elsevier BV
DOI: 10.1016/j.optlaseng.2023.107692

Virtual labeling of mitochondria in living cells using correlative imaging and physics-guided deep learning

Autores: Ayush Somani, Arif Ahmed Sekh, Ida S. Opstad, Åsa Birna Birgisdottir, Truls Myrmel, Balpreet Singh Ahluwalia, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Publicado en: Biomedical Optics Express, Edición Vol. 13, Edición 10, 2022, Página(s) 5495-5516, ISSN 2156-7085
Editor: The Optical Society
DOI: 10.1364/boe.464177

Auxiliary Network: Scalable and Agile Online Learning for Dynamic System with Inconsistently Available Inputs

Autores: Rohit Agarwal, Krishna Agarwal, Alexander Horsch, Dilip K. Prasad
Publicado en: Lecture Notes in Computer Science, Neural Information Processing, 2023, Página(s) 549-561
Editor: Springer International Publishing
DOI: 10.1007/978-3-031-30105-6_46

Toward Faster Microscopy with Encoded Illumination

Autores: Pietro Ricci, Andrea Marchese, Christos Alexandropoulos, Laura Rodríguez-Suñé, Martí Duocastella
Publicado en: 19th Workshop on Information Optics, 2026, Página(s) 33-36
Editor: Springer Nature Switzerland
DOI: 10.1007/978-3-032-11838-7_7

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