OrganVision: Technology for real-time visualizing and modelling of fundamental process in living organoids towards new insights into organ-specific health, disease, and recovery

SAM for Robust Mitochondria Instance Segmentation in Fluorescence Microscopy

Autori: Jadhav, S., Prasad, D. K., & Agarwal, K.
Pubblicato in: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2026
Editore: IEEE

Faster and deeper laser materials processing with ultrasound

Autori: Marti Duocastella
Pubblicato in: The 9th International Congress on Laser Advanced Materials Processing, LAMP 2025, 2025
Editore: LAMP

Engineered heart tissue with a pharmacological off-switch as a tool to study theinfluence of cardiac work on cardiomyocyte maturation

Autori: Rajiven Srikantharajah, Tim Stüdemann, Christoph Manthey, Thomas Eschenhagen, Florian Weinberger
Pubblicato in: 2022, Pagina/e The submissions were abstract only and are open access.
Editore: ISHR World Congress

Forward modeling of mesoscopic imaging with radiative transfer equation

Autori: Y. Qin, Y. Zhong, and K. Agarwal
Pubblicato in: Focus on Microscopy, 2025
Editore: Focus on Microscopy

Transplanted iPSC-derived cardiomyocytes actively contribute to left ventricular function

Autori: Tim Stüdemann, Judith Rössinger, Christoph Manthey, Birgit Geertz, Rajiven Srikantharajah, Constantin von Bibra, Aya Shibamiya, Maria Köhne, Antonius Wiehler, J. Simon Wiegert, Thomas Eschenhagen, Florian Weinberger
Pubblicato in: 2022, Pagina/e The submissions were abstract only and are open access.
Editore: ISHR World Congress

Adaption of Subspace Based Optimization Method for Dark Field Microscopy Data

Autori: Yingying Qin, Ankit Butola, Krishna Agarwal
Pubblicato in: 2024 IEEE International Symposium on Antennas and Propagation and INC/USNC‐URSI Radio Science Meeting (AP-S/INC-USNC-URSI), 2024, Pagina/e 927-928
Editore: IEEE
DOI: 10.1109/ap-s/inc-usnc-ursi52054.2024.10685990

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autori: Florian Weinberger
Pubblicato in: ICGEB, Seminar Series, 2025
Editore: ICGEB

THE TRANSLATIONAL PATH TO HEART REGENERATION: GENETIC APPROACHES

Autori: Florian Weinberger
Pubblicato in: 2022
Editore: CNIC Regeneration Symposium

Development of multimodal Rayleigh light-sheet and Frequency-encoded Microscopy for label-free chemical imaging of highly dynamic biological systems

Autori: D. Bhattacharya, A. Courtier, A. Rowlings, S. Lane, Laura Rodríguez, B. Creith, M. Duocastella, S. Mahajan
Pubblicato in: 2025, 2025
Editore: Focus on Microscopy

Practical challenges in inverse scattering for RI reconstruction with label-free coherent microscopy

Autori: Yingying Qin
Pubblicato in: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Editore: PIERS

The design space of RI reconstruction for label-free optical microscopy

Autori: Y. Huang, Y. Qin, Y. Zhong and K. Agarwal
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT The Arctic University of Norway

Engineered heart tissue and optogenetics – a powerful and versatile combination

Autori: Karl-Felix Müller, Bangfen Pan, Julius Hansen, Julia Krause, Grit Höppner, Tim Stüdemann, Ingke Braren, Florian Weinberger, Arne Hansen, Christine E. Gee, Torsten Christ, Thomas Eschenhagen, Justus Stenzig
Pubblicato in: 2022, Pagina/e The submissions were abstract only and are open access.
Editore: ISHR World Congress

Artificial intelligence solution for microscopy and nanoscopy

Autori: Krishna Agarwal
Pubblicato in: CEDAS Conference, Numero No abstracts was asked., 2021
Editore: University of Bergen

Haphazard Inputs as Images in Online Learning

Autori: Rohit Agarwal, Aryan Dessai, Arif Ahmed Sekh, Krishna Agarwal, Alexander Horsch, Dilip K. Prasad
Pubblicato in: 2025 International Joint Conference on Neural Networks (IJCNN), 2025, Pagina/e 1-9
Editore: IEEE
DOI: 10.1109/ijcnn64981.2025.11228356

3D refractive index imaging from coherent label-free microscopy: inverse scattering reconstruction and the influence of illumination modes

Autori: Yingying Qin, Krishna Agarwal
Pubblicato in: Quantitative Phase Imaging XII, 2026, Pagina/e 44
Editore: SPIE
DOI: 10.1117/12.3079110

Tissue Engineering und Stammzellen am Herz

Autori: Florian Weinberger
Pubblicato in: Annual meeting German Transplantation Society, 2022
Editore: Annual meeting German Transplantation Society

Computational PSF Estimation Enables Aberration-Free Deconvolution

Autori: F. Niknam, K. Agarwal
Pubblicato in: Focus on Microscopy 2025, 2025
Editore: Focus on Microscopy

Ultrasound-enabled light focusing for enhanced laser materials processing

Autori: Marti Duocastella
Pubblicato in: COLA 2024, 17th International Conference on Laser Ablation, 2024
Editore: MITOS S.A.

Biomimetic hydrogel topology facilitates cell plasticity via actin remodeling to modulate cell motility: A multimodal optical imaging-based evaluation

Autori: Ghosh, B. and Agarwal
Pubblicato in: TERMIS 2025, 2025
Editore: TERMIS

Computational Microscopy

Autori: Krishna Agarwal
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT

Blind reconstruction of challenging raw data outperforms commercial 3DSIM

Autori: I.S. Opstad, S. Acuña, S. Ströhl, F. Ströhl, B.S. Ahluwalia, K. Agarwal
Pubblicato in: 2023
Editore: Focus on Microscopy

Monitoring mitochondria turnover and transfer in cardiac cells

Autori: Åsa B. Birgisdottir
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT

Laser additive fabrication of tailored micro-optics

Autori: Marti Duocastella, Ernest Martí-Jerez, Salvatore Surdo
Pubblicato in: Proceedings Volume PC11989, Laser-based Micro- and Nanoprocessing XVI, 2022, Pagina/e The submissions are abstract only and open access. The videos of talks are on demand.
Editore: SPIE
DOI: 10.1117/12.2608835

MUSICAL – a versatile super-resolution microscopy solution for gentle imaging of physical characteristics of biological samples

Autori: Sebastian Acuña and Krishna Agarwal
Pubblicato in: 2023
Editore: 4th International Conference On Optics, Photonics, And Lasers (OPL-2023)

Illumination Mode Effects in Three-dimensional Inverse Scattering for Label-free Optical Imaging

Autori: Y. Qin, Y. Zhong and K. Agarwal
Pubblicato in: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Editore: PIERS

Reconstruction of Objects at Cell Scale from Microscope Images with Inverse Scattering Algorithm

Autori: Yingying Qin, Yu Zhong, Krishna Agarwal
Pubblicato in: 2025 International Conference on Electromagnetics in Advanced Applications (ICEAA), 2025, Pagina/e 0314-0314
Editore: IEEE
DOI: 10.1109/iceaa65662.2025.11305969

How optical microscopes can shape the future of nanoscience

Autori: Marti Duocastella
Pubblicato in: Capita Selecta 2025-2026, 2026
Editore: KU Lueven

NorViVQA: Visual Question Answering for Visually Impaired in Norwegian Language

Autori: Pal, R., Kar, S., & Prasad, D. K.
Pubblicato in: Proceedings of the Symposium of the Norwegian AI Society 2025, 2025
Editore: Norwegian AI Society

Adaptation and performance of well-known non-linear inverse solvers in optical microscopy

Autori: Yingying Qin, Ankit Butola, Krishna Agarwal
Pubblicato in: 2024 IEEE International Symposium on Antennas and Propagation and INC/USNC‐URSI Radio Science Meeting (AP-S/INC-USNC-URSI), 2024, Pagina/e 1147-1148
Editore: IEEE
DOI: 10.1109/ap-s/inc-usnc-ursi52054.2024.10687253

MUSICAL: a family of computational techniques for fluorescence nanoscopy

Autori: Sebastian Acuña and Krishna Agarwal
Pubblicato in: Focus on Microscopy 2023, 2023
Editore: Focus on Microscopy

3D refractive index reconstruction from phaseless coherent label-free imaging

Autori: Y. Qin, A. Butola, Y. Zhong, and K. Agarwal
Pubblicato in: Focus on Microscopy 2025, 2025
Editore: Focus on Microscopy

Forward and Inverse Modeling of Mesoscopic Optical Microscopy Using the Radiative Transfer Equation

Autori: Y. Qin, K. Agarwal and Y. Zhong
Pubblicato in: Photonics & Electromagnetics Research Symposium (PIERS 2026), 2026
Editore: PIERS

Computational Adaptive Optics for Thick Tissue Microscopy via Linear Bayesian Modeling of Anisotropic Scattering

Autori: F. Niknam, K. Agarwal
Pubblicato in: Focus on Microscopy 2026, 2026
Editore: Focus on Microscopy

Shape based forward solver for multi-nested body in label-free microscopy

Autori: Y. Huang, Y. Qin and K. Agarwal
Pubblicato in: Focus on Microscopy, 2025
Editore: Focus on Microscopy

Fast and High-Fidelity Deconvolution Enabled by Modified Richardson-Lucy Algorithm

Autori: F. Niknam, K. Agarwal
Pubblicato in: Focus on Microscopy 2025, 2025
Editore: Focus on Microscopy

Live measurement of cancer cell motility and plasticity by label-free imaging of intracellular actin dynamics using gradient light interference microscopy

Autori: Ghosh, B. and Agarwal
Pubblicato in: Focus on Microscopy 2025, 2025
Editore: Focus on Microscopy

MUSI-tAF: autofluorescence-based super-resolution of collagen fibrils in fixed tissues for density estimation

Autori: B. Ghosh, S. Acuña, K. Agarwal
Pubblicato in: 2023
Editore: Focus on Microscopy

Pluripotent stem cell-based heart repair

Autori: Florian Weinberger
Pubblicato in: TRON, Translational Oncology, curATalk Seminar Series, 2024
Editore: TRON

Preliminary Test Study on RI Reconstruction Performance with Label-free Microscope Data by Inverse Scattering Algorithms

Autori: Y. Qin, A. Butola, and K. Agarwal
Pubblicato in: Photonics & Electromagnetics Research Symposium (PIERS 2024), 2024
Editore: PIERS

MUS-CARS: development of a computational resolution enhancement towards label-free chemical imaging

Autori: D. Bhattacharya, D. Lamparte, K. Agarwal, S. Willaime-Morawek, S. Mahajan
Pubblicato in: Focus on Microscopy 2026, 2026
Editore: Focus on Microscopy

Contractile force of transplanted cardiomyocytes actively supports heartfunction after injury

Autori: Florian Weinberger
Pubblicato in: 2023
Editore: German Cardiac Society

A simple and flexible platform for optogenetic pacing in cardiac tissue engineering

Autori: Bangfen Pan, Julius Hansen, Tim Stüdemann, Florian Weinberger, Thomas Eschenhagen, Justus Stenzig
Pubblicato in: 2022, Pagina/e The submissions were abstract only and are open access.
Editore: ISHR World Congress

Evaluating LLM-as-a-Judge for Medical Term Simplification

Autori: Buhnila, I., Sinha, A., Agarwal, R., Prasad, D. K., & Constant, M
Pubblicato in: ACL BioNLP, 2026
Editore: ACL

Toward faster and deeper optical microscopes by combining ultrasound with light

Autori: Marti Duocastella
Pubblicato in: 2023
Editore: Spanish and Portuguese Advanced Optical Meeting (SPAOM)

OrganVision - Nanoscopic window into the life of heart

Autori: Giulia De Poli, Krishna Agarwal
Pubblicato in: 2022
Editore: AI4future

Inverse scattering based 3D refractive index imaging: modeling, reconstruction and illumination effects

Autori: Y. Qin and K. Agarwal
Pubblicato in: XXXVIth URSI General Assembly and Scientific Symposium (URSI GASS 2026), 2026
Editore: URSI

Physics-guided Loss Functions Impact Performance of Deep-learning-based Inverse-scattering-problem Solver

Autori: K. Agarwal, Z. Liu, M. Roy, D. K. Prasad
Pubblicato in: 2023
Editore: Photonics and Electromagnetics Research Symposium (PIERS)

Stem cell-derived cardiomyocyte transplantation – pharmacological considerations

Autori: Florian Weinberger
Pubblicato in: ISHR World Congress, 2022
Editore: ISHR

Challenges and Role of Federated Learning in Microscopy Data Analysis

Autori: A. A. Sekh
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT The Arctic University of Norway

Acousto-Optic Light Engineering for High-Speed Microscopy

Autori: Martí Duocastella
Pubblicato in: 2022
Editore: Frontiers in Lasers and Applications

Encoded light for high-speed optical microscopy

Autori: Marti Duocastella
Pubblicato in: 12th International Weber Symposium, 2025
Editore: Istituto Italiano di Tecnologia

Human engineered heart tissue transplantation in a guinea pig chronic injury model

Autori: Florian Weinberger
Pubblicato in: 2023
Editore: International Society for Heart Research

Acousto-Optic Deflector–Based Structured Illumination and Frequency-Encoded Multiphoton Microscopy for Scanless Imaging of Biological Tissues

Autori: Martin Skorsetz, Aisada König, Grzegorz Rieger, Martí Duocastella, Karsten König
Pubblicato in: Focus on Microscopy 2026, 2026
Editore: Focus on Microscopy

Generative Adversarial Networks for Virtual Fluorescent Staining

Autori: Lorenzo Venieri
Pubblicato in: 24th International Conference on Group Decision and Negotiation, 2024
Editore: 24th International Conference on Group Decision and Negotiation

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autori: R. Agarwal, G. Das, S. Aggarwal, A. Horsch, D.K. Prasad
Pubblicato in: IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2023
Editore: IEEE
DOI: 10.1109/icassp49357.2023.10094987

On Generalization of 3D Generative Models

Autori: Bhansal, Arushika, Abhinanda Ranjit Punnakkal, and Dilip K. Prasad
Pubblicato in: AAI Workshop 2025, 2025
Editore: AAI Workshop 2025

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autori: Florian Weinberger
Pubblicato in: NIH PCTC Cardiovascular Bioengineering Symposium, 2025
Editore: NIH

Adaptation of Inverse Scattering Algorithms for 3D Refractive Index Reconstruction with Coherent Label-free Microscope Data

Autori: Y. Qin, A. Butola, and K. Agarwal
Pubblicato in: Photonics & Electromagnetics Research Symposium PIERS 2024, 2024
Editore: PIERS

Deep imaging in scattering media using ultrasonic endoscopes

Autori: Marti Duocastella
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT

Pluripotent stem cell-based heart repair

Autori: Florian Weinberger
Pubblicato in: Cardioascona 2024, 2024
Editore: Ascona

Analysing the interaction between cardiomyocyte work and cell-cycle with human stem cell derived engineered heart tissue

Autori: Nancy Shehata
Pubblicato in: Cardiovascular Bioengineering Symposium, 2025
Editore: Cardiovascular Bioengineering Symposium

The quest for the perfect microscope: fast, label-free and deep

Autori: Marti Duocastella
Pubblicato in: Imaging Across Scales- From Molecules to Humans, Southampton, UK, 2024
Editore: University of Southampton

AI for Biological problems: Challenges, Solutions, and Lessons from Microscopy and Life-Science Applications

Autori: Dilip K. Prasad
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT

Label-free chemical imaging with computerised super-resolution method to explore demyelination in Alzheimer’s Disease

Autori: Dipanjan Bhattacharya
Pubblicato in: ARUK Annual meeting 2025, 2025
Editore: ARUK

Shaping light with sound for fast and deep 3D imaging

Autori: Marti Duocastella
Pubblicato in: SPIE Defense + Security, Washington DC, USA, 2026
Editore: SPIE

Guided U-Net aided Efficient Image Data Storing with Shape Preservation

Autori: N. Banerjee, S. Malakar, D. K. Gupta, A. Horsch, D.K. Prasad
Pubblicato in: 2023
Editore: Asian Conference on Pattern Recognition (ACPR2023)

Shape-based Forward Modeling via SIEs for Label-free Microscopy

Autori: Y. Huang, Y. Qin and K. Agarwal
Pubblicato in: Photonics & Electromagnetics Research Symposium, 2025
Editore: PIERS

Project presentation

Autori: Matteo Bregonzio
Pubblicato in: 2022
Editore: GO BEYOND 2022

Reconstructing 3D shape from 3D ThunderSTORM Point Clouds

Autori: S. Jadhav, S. Majhi, A.S. Chowdhury, D.K. Prasad, K. Agarwal
Pubblicato in: 2023
Editore: Focus on Microscopy

Development of a label-free computational resolution enhancement method towards biomedical applications

Autori: D. Bhattacharya
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT

Cardiac Repair Mechanisms - Insights from Opto- and Chemogenetic Approaches

Autori: Florian Weinberger
Pubblicato in: McEwen Stem Cell Insitute, Seminar Series, 2025
Editore: McEwen Stem Cell Institute

Quantitative phase imaging of fast dynamic events using acousto-optics and pulsed illumination

Autori: Christos Alexandropoulos, Martí Duocastella
Pubblicato in: 2023
Editore: Focus on Microscopy

Stem Cell-Derived Engineered Heart Tissue Develops in the Absence of Contractility

Autori: C. Manthey, T. Stüdemann, A. Shibamiya, M. Köhne, G. Penalosa Ruiz, J. Rössinger, R. Srikantharajah, C. Schulz, T. Christ, T. Eschenhagen, F. Weinberger
Pubblicato in: Annual Meeting of the German Cardiac Society, 2023
Editore: Clinical Research in Cardiology

No Imputation Needed: A Switch Approach to Irregularly Sampled Time Series

Autori: Rohit Agarwal, Aman Sinha, Ayan Vishwakarma, Xavier Coubez, Marianne Clausel, Mathieu Constant, Alexander Horsch, Dilip K. Prasad
Pubblicato in: NeurIPS 2025 Workshop, 2025
Editore: NeurIPS 2025 Workshop

Multimodal Femtosecond Fiber Laser Microscopy of Engineered Heart Tissues with Acousto-Optic Deflectors

Autori: K König, M Duocastella, M Skorsetz, D Pankin, G Rieger, F Weinberger, N Shehata, A König
Pubblicato in: Focus on Microscopy 2025, 2025
Editore: Focus on Microscopy

Toward Clinical 3D Pathology: Opportunities and Technological Challenges in Light Microscopy

Autori: F. Niknam, Y. Anbarestani
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT The Arctic University of Norway

Intercellular transfer of cardiac mitochondria evaluated by high-sensitivity 3D imaging cytometry, high-resolution microscopy and high-throughput cell respirometry

Autori: Kenneth B. Larsen, Mauro Calvoli, Mireia Nager, Trine B. Kalstad and Asa B. Birgisdottir
Pubblicato in: Cell Press Symposium: Multifaceted Mitochondria, 2026
Editore: Cell Press

Cardiac Work Inhibits Cell Cycle Activity in Engineered Heart Tissue

Autori: R. Srikantharajah, N. Shehata, T. Stüdemann, C. Manthey, T. Eschenhagen, F. Weinberger
Pubblicato in: The Thoracic and Cardiovascular Surgeon, 56th Annual Meeting of the German Society for Pediatric Cardiology (DGPK), 2024
Editore: Georg Thieme Verlag KG
DOI: 10.1055/s-0044-1780731

Modified Richardson-Lucy Algorithm enables High-Fidelity and Fast Deconvolution

Autori: F. Niknam, K. Agarwal
Pubblicato in: BioPhysics Symposium, 2024
Editore: UiT The Arctic University of Norway

High-Fidelity Volumetric Tissue Microscopy: Integrating Computational Adaptive Optics with Accelerated Deconvolution

Autori: F. Niknam, K. Agarwal
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT The Arctic University of Norway

Pluripotent stem cell-based heart repair

Autori: Florian Weinberger
Pubblicato in: Queen Mary University, London Cardiovascular Seminar Series, 2024
Editore: Queen Mary University

Toward Reliable CIE Inversion for Optical Microscopy: A Framework for Hyper-parameter Selection and Efficient Reconstruction

Autori: Y. Huang, Y. Qin, Y. Zhong and K. Agarwal
Pubblicato in: Photonics & Electromagnetics Research Symposium (PIERS 2025), 2025
Editore: PIERS

Hedging Is Not All You Need: A Simple Baseline for Online Learning Under Haphazard Inputs

Autori: Himanshu Buckchash, Momojit Biswas, Rohit Agarwal, Dilip K. Prasad
Pubblicato in: ICASSP 2025 - 2025 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2026, Pagina/e 1-5
Editore: IEEE
DOI: 10.1109/icassp49660.2025.10889697

Gradient Light Interference Microscopy for labelfree detection of early changes in kidney cells embedded in a soft and stiff hydrogel matrix

Autori: B. Ghosh, K. A. Fenton, K. Agarwal
Pubblicato in: 2023
Editore: Focus on Microscopy

Label-free multimodal femtosecond fiber laser microscopy of organoids with acousto-optic deflectors

Autori: Karsten König, Aisada König, Dmitry Pankin, Martin Skorsetz, Florian Weinberger, Nancy Shehata, Krishna Agarwal, Martí Duocastella
Pubblicato in: Multiphoton Microscopy in the Biomedical Sciences XXV, 2025, Pagina/e 42
Editore: SPIE
DOI: 10.1117/12.3039099

A Privacy-Preserving Approach to Data and Artificial Intelligence

Autori: Matteo Bregonzio
Pubblicato in: Bioscopy Conference, 2026
Editore: UiT

Creating In Vitro Kidney Glomerular Microenvironment In 3d Hydrogels For Studying Chronic Kidney Diseases

Autori: Ghosh, B., K Fenton, K Agarwal
Pubblicato in: Tissue Engineering Part A, 2024
Editore: Sage Journals

Analysing the interaction between cardiomyocyte work and cell-cycle with human stem cell derived engineered heart tissue

Autori: Nancy Shehata
Pubblicato in: Gordon Research Conference - Cardiac Regulatory Mechanism, 2024
Editore: Gordon Research Conference - Cardiac Regulatory Mechanism

A Blind Deconvolution Approach for Wide-Field Microscopy

Autori: Farhad Niknam, Krishna Agarwal
Pubblicato in: Optica Imaging Congress 2024 (3D, AOMS, COSI, ISA, pcAOP), 2024, Pagina/e JF2A.6
Editore: Optica Publishing Group
DOI: 10.1364/3d.2024.jf2a.6

Stem-cell based heart repair – pharmacological perspective

Autori: Florian Weinberger
Pubblicato in: 2022, Pagina/e The submissions were abstract only and are open access.
Editore: ISHR World Congress

Towards a Physics-Informed Deep Learning Approach for 3D Phaseless Microscopy

Autori: Nicola Cuzzocrea, Nadia Mammone, Cosimo Ieracitano, Yingying Qin, Krishna Agarwal, Martina T. Bevacqua
Pubblicato in: 2026 IEEE MTT-S International Microwave Biomedical Conference (IMBioC), 2026, Pagina/e 1-3
Editore: IEEE
DOI: 10.1109/imbioc69142.2026.11541160

Computational modeling of light transport for mesoscopic optical microscopy

Autori: Y. Qin, Y. Zhong and K. Agarwal
Pubblicato in: Bioscopy conference, 2026
Editore: UiT The Arctic University of Norway

Controlling light with sound for enhanced materials processing

Autori: Martí Duocastella
Pubblicato in: Laser Applications in Microelectronic and Optoelectronic Manufacturing (LAMOM) XXIX, Numero Abstract is open access, 2024, Pagina/e 27
Editore: SPIE
DOI: 10.1117/12.3001039

What is Good Enough Myocardial Repair, Recovery or Remission in Chronic HF? Basic Science Perspective

Autori: Florian Weinberger
Pubblicato in: 2022
Editore: U-Cars Symposium 2022

Finding an Appropriate Dose for Engineered Heart Tissue

Autori: Florian Weinberger
Pubblicato in: 2022
Editore: Cardiovascular Bioengineering Symposium

Kilohertz frequency encoded microscopy using acousto-optic deflectors

Autori: Andrea Marchese, Pietro Ricci, Peter Saggau, Martí Duocastella
Pubblicato in: 2023
Editore: Focus on Microscopy

Cardiac tissue engineering – opportunities for cardiac regeneration

Autori: Florian Weinberger
Pubblicato in: CNIC Regeneration Symposium, 2022
Editore: CNIC

Analysing the interaction between cardiomyocyte work and cell-cyclehuman stem cell derived engineered heart tissue

Autori: Nancy Shehata
Pubblicato in: Cardiovascular Bioengineering Symposium, XXV ISHR World Congress, 2025
Editore: ISHR

Generation of human engineered heart tissue with a chemo- and optogenetic Off-On switch

Autori: Judith Rössinger, Tim Stüdemann, Aya Shibamiya, Torsten Christ, Thomas Eschenhagen, Florian Weinberger
Pubblicato in: 2022, Pagina/e The submissions were abstract only and are open access.
Editore: ISHR World Congress

A different perspective on illumination choice for label-free scattering microscopy

Autori: Y. Qin, Y. Zhong, and K. Agarwal
Pubblicato in: Focus on Microscopy 2026, 2026
Editore: Focus on Microscopy

Marked increase in mitochondria degradation in engineered heart tissue during reperfusion

Autori: Mireia Nager Grifo
Pubblicato in: Experimental Health Research Conference, 2023
Editore: UiT The Arctic University of Norway

Chemogenetics to study the interplay between cardiac contractility and cardiomyocyte morphology

Autori: Judith Rössinger
Pubblicato in: Keystone Conference, 2023
Editore: Keystone Conference

"“Focus on engineered heart tissue transplantation: The HeartVision project”, invited talk at NORHEART seminar: ""Mechanisms in Cardiac Metabolism and Mitochondrial function: Highlighting Translational Aspects"", UiT, 2026"

Autori: A. B. Birgisdottir
Pubblicato in: 2026, Pagina/e No abstracts were published. The seminar was open to all and streamed. Link to the program provided.
Editore: UiT-The Arctic University of Norway

Predicting Early Diabetic Kidney Disease Using a 3D Mesangial Model and Bayesian Mechano-Chemical Stratification

Autori: Biswajoy Ghosh, Farhad Niknam, Nikhil Kumar, Kristin Andreassen Fenton, Krishna Agarwal
Pubblicato in: 2026
Editore: openRxiv
DOI: 10.1101/2023.12.10.571017

Codeset: Modelling Irregularly Sampled Time Series Without Imputation

Autori: Rohit Agarwal
Pubblicato in: 2023
Editore: Github

MiShape: 3D Shape Modelling of Mitochondria in Microscopy

Autori: Abhinanda R. Punnakkal, Suyog S Jadhav, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Pubblicato in: 2023
Editore: Arxiv

Replication Data for: Multiple signal classification as a blind reconstruction approach for three-dimensional structured illumination microscopy

Autori: Ida S. Opstad
Pubblicato in: 2023
Editore: DataverseNO

LysoTracker Deep Red exhibits photoconversion in multi-color structured illumination microscopy

Autori: Ida Sundvor Opstad, Kenneth Bowitz Larsen, Åsa Birna Birgisdottir, Krishna Agarwal
Pubblicato in: 2023
Editore: BiorXiv
DOI: 10.1101/2023.10.29.564502

Fluorescence microscopy videos of mitochondria in H9c2 cardiomyoblasts

Autori: Ida S. Opstad
Pubblicato in: 2023
Editore: DataverseNO

Contractility governs cardiomyocyte cell cycle activity

Autori: Nancy Shehata, Rajiven Srikantharajah, Eleonore Baier, Christoph Manthey, Tim Stüdemann, Marie Nehring, Anita Covic, Christian Müller, Bente Siebels, Paula Nissen, Anika Witten, Magdalena Zafra Castellano, Yago Rodriguez, Lucia Zamacona Gomez, Imke Janssen, Jorge Rodriguez, Andrea Garza Enriquez, Miguel Angel Garitagoitia Romero, Romina Di Mattia, Andreas Dendorfer, Alessandra Moretti, Christine
Pubblicato in: 2026
Editore: openRxiv
DOI: 10.1101/2025.08.19.671096

Dataset and codeset for BMWP: the first Bengali math word problems dataset for operation prediction and solving

Autori: Sanchita Mondal
Pubblicato in: Dataset, 2025
Editore: Github

Aux-Drop: Handling Haphazard Inputs in Online Learning Using Auxiliary Dropouts

Autori: R. Agarwal
Pubblicato in: Codeset, 2023
Editore: Github

Online Learning under Haphazard Input Conditions: A Comprehensive Review and Analysis

Autori: R. Agarwal
Pubblicato in: Dataset, 2026
Editore: Github

Online Learning under Haphazard Input Conditions: A Comprehensive Review and Analysis

Autori: Rohit Agarwal; Arijit Das; Alexander Horsch; Krishna Agarwal; Dilip K. Prasad
Pubblicato in: CoRR, Numero 2, 2024
Editore: Arxiv
DOI: 10.48550/arxiv.2404.04903

"""OrganVision: An ERC funded interdisciplinary collaboration project” invited talk at IMB conference"

Autori: A. B. Birgisdottir
Pubblicato in: 2022, Pagina/e The entire event was open for all. The program was broadcast on digital stream of university. temporary link to program is given.
Editore: IMB conference

Multifocus microscopy with optically sectioned axial superresolution

Autori: Ströhl, Florian; Hansen, Daniel Henry; Nager Grifo, Mireia; Birgisdottir, Åsa Birna
Pubblicato in: Numero 1, 2022
Editore: Arxiv
DOI: 10.48550/arxiv.2206.01257

Activity Report 2021

Autori: Institut de Nanociència i Nanotecnologia
Pubblicato in: instname:, Numero 1, 2021
Editore: University of Barcelona

"""Monitoring mitochondria degradation in cardiac cells"" invited talk at the NORHEART seminar ""Targeting mitochondria in cardiovascular disease"""

Autori: A. B. Birgisdottir
Pubblicato in: 2021
Editore: NORHEART seminar

Tool & Video Protocol: Tool on fluorescence microscopy images of fixed cardiomyoblasts

Autori: Abhinanda Punakkal et al.
Pubblicato in: 2023
Editore: JOVE

Phase 1 digital staining AI model codesets using Co-Fl-Lf datasets from conventional microscopes

Autori: Lorenzo Venieri
Pubblicato in: Dataset, 2024
Editore: Github

«Mitophagy is induced in engineered heart tissue after simulated ischemia and reperfusion», invited talk at NORHEART seminar « Pathways and Regulatory Mechanisms in Metabolism and Mitochondrial Function», UiT-The Arctic University of Norway, Tromsø, Norway, May 12-13, 2025

Autori: M. Nager
Pubblicato in: 2025, Pagina/e No abstracts were published. Seminar open to all NORHEART members and was streamed. Link to program provided.
Editore: UiT-The Arctic University of Norway

“Monitoring degradation of mitochondria in cardiac cells”, invited talk at Annual meeting of the Scandinavian Physiological Society

Autori: A. B. Birgisdottir
Pubblicato in: 2021, Pagina/e No abstracts or papers were submitted. Program is open access.
Editore: Scandinavian Physiological Society

Wasserstein GAN for three-dimensional multi-channel virtual fluorescent staining

Autori: Andrea Masella
Pubblicato in: Codeset, 2024
Editore: Github

"«Interdisciplinary collaboration synergy» , invited talk at a ""Research leader seminar"", Faculty of Health Sciences, UiT, 2026"

Autori: A. B. Birgisdottir
Pubblicato in: 2026, Pagina/e No abstracts were published from the seminar. Seminar open to all invited research leaders at the Faculty. Link to the program is provided.
Editore: UiT-The Arctic University of Norway

Latent Graph Attention for Enhanced Spatial Context

Autori: Ayush Singh, Yash Bhambhu, Himanshu Buckchash, Deepak K. Gupta, Dilip K. Prasad
Pubblicato in: Arxiv, 2023
Editore: Arxiv
DOI: 10.48550/arxiv.2307.04149

Codeset: Presenting CODS (Cell Organelle Dynamic Simulation)

Autori: A. V. Celeste
Pubblicato in: Codeset, 2023
Editore: UiT The Arctic University of Norway

Codeset and dataset for: Graph-based hostile content detection in Hindi language. Discover Computing.

Autori: Chakraborty, A., Joardar, S., Prasad, D. K., & Sekh, A. A.
Pubblicato in: Dataset, 2025
Editore: Github

Fluorescence microscopy videos of mitochondria and endosomes in H9c2 cardiomyoblasts

Autori: Ida S. Opstad
Pubblicato in: 2023
Editore: DataverseNO

«Monitoring mitochondria turnover and transfer in cardiac cells», invited talk at the Bioscopy conference, UiT, Tromsø, Norway, 2026

Autori: A. B. Birgisdottir
Pubblicato in: 2026, Pagina/e No abstracts were published. Link to the program is provided.
Editore: UiT-The Arctic University of Norway

pNNCLR: Stochastic Pseudo Neighborhoods for Contrastive Learning based Unsupervised Representation Learning Problems

Autori: Momojit Biswas, Himanshu Buckchash, Dilip K. Prasad
Pubblicato in: 2023
Editore: Arxiv
DOI: 10.48550/arxiv.2308.06983

Towards a More Inclusive AI: Progress and Perspectives in Large Language Model Training for the S\'ami Language

Autori: Paul, Ronny; Buckchash, Himanshu; Parida, Shantipriya; Prasad, Dilip K.
Pubblicato in: Numero 1, 2024
Editore: Arxiv

"""HeartVision-a success story"", invited speaker at the IMB conference 2025, Faculty of Health Sciences UiT, 2025"

Autori: A. B. Birgisdottir
Pubblicato in: 2025, Pagina/e No abstracts were published. Conference open to all employees at IMB, UiT. Link to the program provided.
Editore: UiT-The Arctic University of Norway

"""Exploiting cardiomyocytes derived from human induced pluripotent stem cells and engineered heart tissue for studying cellular mechanism in the human heart"", invited talk at the Experimental Health Research Conference (EHRC), Faculty of Health Sciences, UiT, 2025"

Autori: A. B. Birgisdottir
Pubblicato in: 2025, Pagina/e No abstracts were published from the conference. Link to the conference program is provided.
Editore: UiT-The Arctic University of Tromsø

Summer School Course Tutorial Codeset “Interpretable DL Playground”

Autori: Ayush Somani
Pubblicato in: 2023
Editore: Github

"""Marked increase in mitochondria degradation in engineered heart tissue during reperfusion"""

Autori: A. B. Birgisdottir and M.N. Grifo
Pubblicato in: 2023
Editore: Mimisbrunnr conference

"""Mitophagy is induced in engineered heart tissue after simulated ischemia and reperfusion"", invited talk to present the published paper´s main findings at a webinar organized by MITOtalks and Focal plane, 2025."

Autori: M. Nager and A. B. Birgisdottir
Pubblicato in: 2025, Pagina/e No abstracts published. Webinar open to all that registrered. Link to webinar announcement provided.
Editore: MITOtalks and Focal Plane

3DMSL - 3D Mitochondria Shape Library for Optical Microscopy

Autori: Punnakkal, Abhinanda Ranjit; Jadhav, Suyog S; Celeste, Aaron Vaughn; Horsch, Alexander; Agarwal, Krishna; Prasad, Dilip K
Pubblicato in: Dataset, 2024
Editore: DataverseNO
DOI: 10.18710/jx6jxf

MABNET: Master Assistant Buddy Network With Hybrid Learning for Image Retrieval

Autori: R. Agarwal
Pubblicato in: 2023
Editore: Github

""" Insights into Cardiac Repair Mechanisms from Engineered Heart Tissue"". Keynote talk at NOR-MPS-the annual NOR-MPS; Nordic Organoid and Microphysiological Systems Convention, University of Oslo, Oslo, Norway, 2026"

Autori: Florian Weinberger
Pubblicato in: 2026, Pagina/e No abstracts were published. Link to the program is attached.
Editore: University of Oslo

Label-free acoustic and optical microscopy of live tumor spheroids in hydrogel for high-throughput 3D In-vitro drug screening

Autori: Biswajoy Ghosh, Komal Agarwal, Anowarul Habib, Krishna Agarwal, Frank Melandsø
Pubblicato in: 2026
Editore: openRxiv
DOI: 10.1101/2024.08.28.610181

Finding an Appropriate Dose for Engineered Heart Tissue

Autori: Florian Weinberger
Pubblicato in: Translational Research Seminar Series, SickKids Hospital, Toronto, Canada, Numero No abstract submitted, 2021
Editore: SickKids Hospital

"""Exploiting engineered heart tissue to decipher mitochondria quality control in the human heart"", invited talk at NOR-MPS, the annual Nordic Organoid and Microphysiological Systems Convention Oslo, Norway, 2026"

Autori: A. B. Birgisdottir
Pubblicato in: 2025, Pagina/e No abstracts published from the symposium. Link to the program provided.
Editore: University of Oslo

Modelling Irregularly Sampled Time Series Without Imputation

Autori: Rohit Agarwal, Aman Sinha, Dilip K. Prasad, Marianne Clausel, Alexander Horsch, Mathieu Constant, Xavier Coubez
Pubblicato in: 2023
Editore: Arxiv
DOI: 10.48550/arxiv.2309.08698

Paper Code: Virtual Labeling of Mitochondria in Living Cells using Physics-guided Deep Learning

Autori: Ayush Somani
Pubblicato in: 2022
Editore: Github

Arctic LLM Workshop Hands-on Tutorial Session

Autori: Ayush Somani
Pubblicato in: 2023
Editore: Github

Dense Video Captioning: A Survey of Techniques, Datasets and Evaluation Protocols

Autori: Qasim, Iqra; Horsch, Alexander; Prasad, Dilip K.
Pubblicato in: Numero 1, 2023
Editore: Arxiv
DOI: 10.48550/arxiv.2311.02538

Evidence for the inhibition of cardiomyocytes cycle activity by cardiac contraction

Autori: Nancy Sorial Samy Shehata
Pubblicato in: 2026
Editore: University of Hamburg

Reconstructing 3D Geometries of sub-cellular structures from SMLM clouds

Autori: S. Jadhav
Pubblicato in: 2023
Editore: UiT The Arctic University of Norway

Multiple Signal Classification Algorithm: A computational microscopy tool for fluorescence microscopy

Autori: Sebastián Andrés Acuña Maldonado
Pubblicato in: 2023
Editore: MUNIN, UiT

Study of mitochondrial degradation induced by cryoinjury in engineered heart tissue

Autori: Synne Amalie Hansen
Pubblicato in: 2024
Editore: UiT-The Arctic University of Norway

Scalable Online Deep Learning for Streaming Data with Variable Feature Spaces: Architectures, Imparting Scalability and Data Transformation

Autori: Rohit Agarwal
Pubblicato in: 2025
Editore: UiT The Arctic University of Norway

Presenting CODS (Cell Organelle Dynamic Simulation)

Autori: Aaron Celeste
Pubblicato in: 2023
Editore: UiT The Arctic University of Norway

Advanced Microscopy for Real-time Imaging of Biological Samples

Autori: Christos Alexandropoulos
Pubblicato in: 2026
Editore: Universitat de Barcelona

Generative Adversarial Networks For Three-Dimensional Multi-Channel Virtual Fluorescent Staining

Autori: Lorenzo Venieri
Pubblicato in: 2024
Editore: Università di Bologna
DOI: 10.5281/zenodo.13382862

Study of mitochondrial transfer in hiPSC derived cardiomyocytes and engineered heart tissue

Autori: Kristiana Imsa
Pubblicato in: 2023
Editore: UiT The Arctic University of Norway

Encoded illumination for high-speed optical microscopy

Autori: Eva Maria Torres-Riera
Pubblicato in: 2023
Editore: Universitat Politecnica de Catalunya

Scattering-enhanced intensity based tomography

Autori: Yingying Qin, Ankit Butola, Yu Zhong, Krishna Agarwal
Pubblicato in: IEEE Transactions on Computational Imaging, 2026, Pagina/e 1-9, ISSN 2333-9403
Editore: Institute of Electrical and Electronics Engineers (IEEE)
DOI: 10.1109/tci.2026.3707064

IReCAPTCHA: a robust image-reasoning CAPTCHA system

Autori: Bidyut Das, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: Cybersecurity, Numero 9, 2026, ISSN 2523-3246
Editore: Springer Science and Business Media LLC
DOI: 10.1186/s42400-025-00484-0

Fluorescence microscopy and correlative brightfield videos of mitochondria and vesicles in H9c2 cardiomyoblasts

Autori: Ida S. Opstad, Åsa B. Birgisdottir, Krishna Agarwal
Pubblicato in: Scientific Data, Numero vol. 11, 2024, Pagina/e Article 125, ISSN 2052-4463
Editore: Springer Nature
DOI: 10.1038/s41597-024-02970-5

Latent Graph Attention for Spatial Context in Light-Weight Networks: Multi-Domain Applications in Visual Perception Tasks

Autori: Ayush Singh, Yash Bhambhu, Himanshu Buckchash, Deepak K. Gupta, Dilip K. Prasad
Pubblicato in: Applied Sciences, Numero 14, 2025, Pagina/e 10677, ISSN 2076-3417
Editore: MDPI AG
DOI: 10.3390/app142210677

Graph-based hostile content detection in Hindi language

Autori: Angana Chakraborty, Subhankar Joardar, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: Discover Computing, Numero 28, 2025, ISSN 2948-2992
Editore: Springer Science and Business Media LLC
DOI: 10.1007/s10791-025-09790-0

Modulating cardiac physiology in engineered heart tissue with the bidirectional optogenetic tool BiPOLES

Autori: Barbora Schwarzová, Tim Stüdemann, Muhammed Sönmez, Judith Rössinger, Bangfen Pan, Thomas Eschenhagen, Justus Stenzig, J Simon Wiegert, Torsten Christ, Florian Weinberger
Pubblicato in: Pflugers Archive, European Journal of Physiology, 2023, ISSN 0031-6768
Editore: Springer Verlag
DOI: 10.1007/s00424-023-02869-x

Scan-less microscopy based on acousto-optic encoded illumination

Autori: Andrea Marchese , Pietro Ricci , Peter Saggau, Martí Duocastella
Pubblicato in: Nanophotonics, Numero Volume 13, Numero 1, 2024, Pagina/e 63-73, ISSN 2192-8614
Editore: Berlin de Gruyter
DOI: 10.1515/nanoph-2023-0616

An UltraMNIST classification benchmark to train CNNs for very large images

Autori: Deepak K. Gupta, Udbhav Bamba, Abhishek Thakur, Akash Gupta, Rohit Agarwal, Suraj Sharan, Ertugul Demir, Krishna Agarwal, Dilip K. Prasad
Pubblicato in: Scientific Data, Numero 11, 2024, ISSN 2052-4463
Editore: Springer Science and Business Media LLC
DOI: 10.1038/s41597-024-03587-4

Mitophagy is induced in human engineered heart tissue after simulated ischemia and reperfusion

Autori: Mireia Nàger, Kenneth B. Larsen, Zambarlal Bhujabal, Trine B. Kalstad, Judith Rössinger, Truls Myrmel, Florian Weinberger, Asa B. Birgisdottir
Pubblicato in: Journal of Cell Science, Numero 138, 2025, ISSN 0021-9533
Editore: The Company of Biologists Ltd.
DOI: 10.1242/jcs.263408

TERMIS 2023 – European Chapter Manchester Central Conference Centre Manchester, UK March 28–31, 2023

Autori: Biswajoy Ghosh, Krishna Agarwal
Pubblicato in: Tissue Engineering Part A, 2023, ISSN 1937-3341
Editore: Mary Ann Liebert Inc.
DOI: 10.1089/ten.tea.2023.29043.abstracts

Multilingual visual question answering for visually impaired people

Autori: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: Discover Artificial Intelligence, Numero 5, 2025, ISSN 2731-0809
Editore: Springer Science and Business Media LLC
DOI: 10.1007/s44163-025-00482-8

Propagating Transparency: A Deep Dive into the Interpretability of Neural Networks

Autori: Ayush Somani, Alexander Horsch, Ajit Bopardikar, Dilip K. Prasad
Pubblicato in: Nordic Machine Intelligence, Numero 4, 2024, Pagina/e 1-18, ISSN 2703-9196
Editore: University of Oslo Library
DOI: 10.5617/nmi.10755

Mitochondrial dynamics and quantification of mitochondria‐derived vesicles in cardiomyoblasts using structured illumination microscopy

Autori: Ida S. Opstad, Gustav Godtliebsen, Balpreet Singh Ahluwalia, Truls Myrmel, Krishna Agarwal, Åsa Birna Birgisdottir
Pubblicato in: Journal of Biophotonics, Numero 15, 2023, ISSN 1864-063X
Editore: Wiley - VCH Verlag GmbH & CO. KGaA
DOI: 10.1002/jbio.202100305

Multifocus microscopy with optical sectioning and high axial resolution

Autori: Florian Ströhl, Daniel Henry Hansen, Mireia Nager Grifo, Åsa Birna Birgisdottir
Pubblicato in: Optica, Numero Vol. 9, Numero 11, 2022, Pagina/e 1210-1218, ISSN 2334-2536
Editore: Optica Publishing Group
DOI: 10.1364/optica.468583

BMWP: the first Bengali math word problems dataset for operation prediction and solving

Autori: Sanchita Mondal, Debnarayan Khatua, Sourav Mandal, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: Discover Artificial Intelligence, Numero 5, 2025, ISSN 2731-0809
Editore: Springer Science and Business Media LLC
DOI: 10.1007/s44163-025-00243-7

Improving visual question answering for visually impaired people leveraging pre-trained models

Autori: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: Discover Applied Sciences, Numero 8, 2026, ISSN 3004-9261
Editore: Springer Science and Business Media LLC
DOI: 10.1007/s42452-025-07996-x

The multifaceted role of autophagy and mitophagy in cardiovascular health and disease

Autori: Mireia Nàger, Mauro Calvoli, Kenneth B. Larsen, Asa B. Birgisdottir
Pubblicato in: Autophagy Reports, Numero 4, 2025, ISSN 2769-4127
Editore: Informa UK Limited
DOI: 10.1080/27694127.2025.2572511

3D Mitochondria Shape Library for Optical Microscopy (3DMSL): A multimodal dataset for deep learning based mitochondrial analysis

Autori: Abhinanda R. Punnakkal, Suyog S. Jadhav, Aaron V. Celeste, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Pubblicato in: Data in Brief, Numero 65, 2026, Pagina/e 112507, ISSN 2352-3409
Editore: Elsevier BV
DOI: 10.1016/j.dib.2026.112507

Author Correction: Viewing life without labels under optical microscopes

Autori: Biswajoy Ghosh, Krishna Agarwal
Pubblicato in: Communications Biology, Numero 7, 2024, ISSN 2399-3642
Editore: Springer Science and Business Media LLC
DOI: 10.1038/s42003-024-06977-x

AI-driven analysis by identifying risk factors of VL relapse in HIV co-infected patients

Autori: Abhishek Kumar, Sanchita Mondal, Debnarayan Khatua, Debashree Guha, Budhaditya Mukherjee, Arista Lahiri, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: Scientific Reports, Numero 15, 2025, ISSN 2045-2322
Editore: Nature Publishing Group
DOI: 10.1038/s41598-025-07406-7

HnRNP K mislocalisation is a novel protein pathology of frontotemporal lobar degeneration and ageing and leads to cryptic splicing

Autori: Alexander Bampton, Ariana Gatt, Jack Humphrey, Sara Cappelli, Dipanjan Bhattacharya, Sandrine Foti, Anna-Leigh Brown, Yasmine Asi, Yi Hua Low, Marco Foiani, Towfique Raj, Emanuele Buratti, Pietro Fratta, Tammaryn Lashley
Pubblicato in: Acta Neuropathologica, Numero 142, 2021, Pagina/e 609-627, ISSN 0001-6322
Editore: Springer Verlag
DOI: 10.1007/s00401-021-02340-0

3D refractive index reconstruction from phaseless coherent optical microscopy data using multiple scattering-based inverse solvers - a study

Autori: Yingying Qin, Ankit Butola, Krishna Agarwal
Pubblicato in: Inverse Problems, Numero volume 40, no. 1, 2023, Pagina/e article 015003, ISSN 0266-5611
Editore: Institute of Physics Publishing
DOI: 10.1088/1361-6420/ad0c29

Multiphoton Imaging With Frequency Encoded Illumination Using Dual Acousto-Optic Deflectors

Autori: M. Skorsetz, A. König, G. Rieger, K. König
Pubblicato in: IEEE Photonics Journal, Numero 18, 2026, Pagina/e 1-6, ISSN 1943-0655
Editore: Institute of Electrical and Electronics Engineers
DOI: 10.1109/jphot.2026.3660905

Abstract 14720: Marked Increase in Mitochondria Degradation in Engineered Heart Tissue During Reperfusion

Autori: Mireia Nager, Zambarlal Bhujabal, Kenneth B Bowitz Larsen, Trine B Kalstad, Truls Myrmel, Asa B Birgisdottir
Pubblicato in: Circulation, Numero 146, 2023, ISSN 0009-7322
Editore: Lippincott Williams & Wilkins Ltd.
DOI: 10.1161/circ.146.suppl_1.14720

High-speed fluctuation microscopy with acousto-optic illumination

Autori: F Niknam, L Rodríguez-Suné, K Agarwal, M Duocastella
Pubblicato in: Journal of Physics: Photonics, Numero 8, 2026, Pagina/e 025004, ISSN 2515-7647
Editore: IOP Publishing
DOI: 10.1088/2515-7647/ae54eb

Modulation of cardiomyocyte contractility and action potentials with chemogenetic chloride currents

Autori: Muhammed Sönmez, Tim Stüdemann, Christoph Manthey, Anita Covic, Nancy Shehata, Junsoo Im, Barbora Schwarzova, Judith Rössinger, Rajiven Srikantharajah, Aya Shibamiya, Edzard Schwedhelm, Thomas Eschenhagen, Torsten Christ, Florian Weinberger
Pubblicato in: The Journal of Physiology, Numero 603, 2025, Pagina/e 1399-1415, ISSN 0022-3751
Editore: Blackwell Publishing Inc.
DOI: 10.1113/jp286428

Chemogenetic engineered heart tissue to study the influence of contractility on cardiac maturation

Autori: Rajiven Srikantharajah, Tim Stüdemann, Nancy Shehata, Christoph Manthey, Thomas Eschenhagen, Florian Weinberger
Pubblicato in: Journal of Molecular and Cellular Cardiology Plus, Numero 15, 2026, Pagina/e 100719, ISSN 2772-9761
Editore: Elsevier BV
DOI: 10.1016/j.jmccpl.2025.100719

VisionAidQA: Advancing Visual Question Answering for the Visually Impaired

Autori: Ratnabali Pal, Samarjit Kar, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: ACM Computing Surveys, Numero 58, 2026, Pagina/e 1-36, ISSN 0360-0300
Editore: Association for Computing Machinary, Inc.
DOI: 10.1145/3788861

Impulse initiation in engrafted pluripotent stem cell-derived cardiomyocytes can stimulate the recipient heart

Autori: Tim Stüdemann, Barbora Schwarzova, Till Schneidewind, Birgit Geertz, Constantin von Bibra, Marie Nehring, Judith Rössinger, J. Simon Wiegert, Thomas Eschenhagen, Florian Weinberger
Pubblicato in: Stem Cell Reports, 2026, ISSN 2213-6711
Editore: Cell Press
DOI: 10.1101/2023.11.12.566756

Snapshot Quantitative Phase Imaging with Acousto-Optic Chromatic Aberration Control

Autori: Christos Alexandropoulos, Laura Rodríguez-Suñé, Martí Duocastella
Pubblicato in: Sensors, Numero 25, 2025, Pagina/e 4503, ISSN 1424-8220
Editore: Multidisciplinary Digital Publishing Institute (MDPI)
DOI: 10.3390/s25144503

Viewing life without labels under optical microscopes

Autori: Biswajoy Ghosh, Krishna Agarwal
Pubblicato in: Communication Biology, Numero vol. 6, 2023, Pagina/e article number 559, ISSN 2399-3642
Editore: Springer Nature
DOI: 10.1038/s42003-023-04934-8

BGPCN: A BERT and GPT-2-based Relational Graph Convolutional Network for hostile Hindi information detection

Autori: Angana Chakraborty, Subhankar Joardar, Dilip K. Prasad, Arif Ahmed Sekh
Pubblicato in: Array, Numero 28, 2026, Pagina/e 100601, ISSN 2590-0056
Editore: Elsevier BV
DOI: 10.1016/j.array.2025.100601

Challenges and perspectives of heart repair with pluripotent stem cell-derived cardiomyocytes

Autori: Thomas Eschenhagen, Florian Weinberger
Pubblicato in: Nature Cardiovascular Research, Numero 3, 2024, Pagina/e 515-524, ISSN 2731-0590
Editore: Springer Science and Business Media LLC
DOI: 10.1038/s44161-024-00472-6

Analyzing Mitochondrial Morphology Through Simulation Supervised Learning

Autori: Abhinanda Ranjit Punnakkal, Gustav Godtliebsen, Ayush Somani, Sebastian Andres Acuna Maldonado, Åsa Birna Birgisdottir, Dilip K. Prasad, Alexander Horsch, Krishna Agarwal
Pubblicato in: Journal of Visualized Experiments, 2024, ISSN 1940-087X
Editore: MYJoVE Corporation
DOI: 10.3791/64880-v

Molecular histopathology of matrix proteins through autofluorescence super-resolution microscopy

Autori: Biswajoy Ghosh, Jyotirmoy Chatterjee, Ranjan Rashmi Paul, Sebastian Acuña, Pooja Lahiri, Mousumi Pal, Pabitra Mitra, Krishna Agarwal
Pubblicato in: Scientific Reports, Numero 14, 2024, ISSN 2045-2322
Editore: Nature Publishing Group
DOI: 10.1038/s41598-024-61178-0

Label-free correlative morpho-chemical tomography of 3D kidney mesangial cells

Autori: Ankit Butola, Biswajoy Ghosh, Jaena Park, Minsung Kwon, Alejandro De la Cadena, Sudipta S Mukherjee, Rohit Bhargava, Stephen A. Boppart, Krishna Agarwal
Pubblicato in: Journal of Biomedical Optics, Numero 31, 2026, ISSN 1083-3668
Editore: S P I E - International Society for Optical Engineering
DOI: 10.1117/1.jbo.31.3.036501

High-resolution visualization and assessment of basal and OXPHOS-induced mitophagy in H9c2 cardiomyoblasts

Autori: Gustav Godtliebsen, Kenneth Bowitz Larsen, Zambarlal Bhujabal, Ida S Opstad, Mireia Nager, Abhinanda R Punnakkal, Trine B Kalstad, Randi Olsen, Trine Lund, Dilip K Prasad, Krishna Agarwal, Truls Myrmel, Asa Birna Birgisdottir
Pubblicato in: Autophagy, Numero vol. 19, issue 10, 2023, Pagina/e 2769-2788, ISSN 1554-8627
Editore: Landes Bioscience
DOI: 10.1080/15548627.2023.2230837

Video-rate quantitative phase imaging with dynamic acousto-optic defocusing

Autori: Christos Alexandropoulos, Martí Duocastella
Pubblicato in: Optics and Lasers in Engineering, Numero Volume 169, October 2023, 2023, Pagina/e article 107692, ISSN 0143-8166
Editore: Elsevier BV
DOI: 10.1016/j.optlaseng.2023.107692

Virtual labeling of mitochondria in living cells using correlative imaging and physics-guided deep learning

Autori: Ayush Somani, Arif Ahmed Sekh, Ida S. Opstad, Åsa Birna Birgisdottir, Truls Myrmel, Balpreet Singh Ahluwalia, Alexander Horsch, Krishna Agarwal, Dilip K. Prasad
Pubblicato in: Biomedical Optics Express, Numero Vol. 13, Numero 10, 2022, Pagina/e 5495-5516, ISSN 2156-7085
Editore: The Optical Society
DOI: 10.1364/boe.464177

Auxiliary Network: Scalable and Agile Online Learning for Dynamic System with Inconsistently Available Inputs

Autori: Rohit Agarwal, Krishna Agarwal, Alexander Horsch, Dilip K. Prasad
Pubblicato in: Lecture Notes in Computer Science, Neural Information Processing, 2023, Pagina/e 549-561
Editore: Springer International Publishing
DOI: 10.1007/978-3-031-30105-6_46

Toward Faster Microscopy with Encoded Illumination

Autori: Pietro Ricci, Andrea Marchese, Christos Alexandropoulos, Laura Rodríguez-Suñé, Martí Duocastella
Pubblicato in: 19th Workshop on Information Optics, 2026, Pagina/e 33-36
Editore: Springer Nature Switzerland
DOI: 10.1007/978-3-032-11838-7_7

Risultati finali

Pubblicazioni

Scarica Scarica il contenuto della pagina